| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632653
Identifier: 110632653
GI number: 110632653
Start: 330000
End: 330518
Strand: Reverse
Name: 110632653
Synonym: Meso_0292
Alternate gene names: NA
Gene position: 330518-330000 (Counterclockwise)
Preceding gene: 110632654
Following gene: 110632652
Centisome position: 7.49
GC content: 63.01
Gene sequence:
>519_bases ATGAGCCTCCTTGGGAATGATAGCCGCCCGCCGGCCTCATGGAAGGCAGCCGCACTGACGGCGGCATTGCTGGCTGCGGG AACAACAGGTCTGCGCGGGGCCGAAGCAAATTCGGCTACCAGCCAGGATGAGGTGCAACGCTTCTGTACAAATATCGCCG ACGAGGCCCGTGACAGGCGCTACATGCTCCAGTCGCAACAGCTCGAGACGCTAAAGGGCGAAGTGGAGAAGCGGATCGCC GCCCTTGAGGAAAAGCGCCGCGAGTACGAAGATTGGCTTGCACGTCGCGAGGCGTTTCTTGCCAAGGCCGAGGAAAACCT CGTGCAGATATATTCGAGCATGCGGCCGGACGCAGCCGCCGAACGGCTTGCGGAAGTGCGCATCGACCTTGCAGCCGCCA TCCTGGTGAAGCTCGAGCCGCGCACGGCCGGCATCATCCTCAACGAAATGAACAGCAAAGCGGCCGCTGCGCTGACCGGC ATCATGGCGAGCGCGGCACGCCCCGAGGACCCCTCATGA
Upstream 100 bases:
>100_bases GGCGTAAAGCCGGATGGTATCATCGCGATCCTGCAAGGCATCAAGTCTGCCGGTGCTTTGCAGGGCGAACTGGTCTTGCA GTAGGAGAATTAAAAAGGCC
Downstream 100 bases:
>100_bases ACAAGATCGCAGGAACCCTGTTCCTCCTCGCCGGCCTTGCCATGGCCGGCTGCACGACGACCGAGGAGCTCGGCAAGCCG CCTGCGCTTTCGCCGGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSLLGNDSRPPASWKAAALTAALLAAGTTGLRGAEANSATSQDEVQRFCTNIADEARDRRYMLQSQQLETLKGEVEKRIA ALEEKRREYEDWLARREAFLAKAEENLVQIYSSMRPDAAAERLAEVRIDLAAAILVKLEPRTAGIILNEMNSKAAAALTG IMASAARPEDPS
Sequences:
>Translated_172_residues MSLLGNDSRPPASWKAAALTAALLAAGTTGLRGAEANSATSQDEVQRFCTNIADEARDRRYMLQSQQLETLKGEVEKRIA ALEEKRREYEDWLARREAFLAKAEENLVQIYSSMRPDAAAERLAEVRIDLAAAILVKLEPRTAGIILNEMNSKAAAALTG IMASAARPEDPS >Mature_171_residues SLLGNDSRPPASWKAAALTAALLAAGTTGLRGAEANSATSQDEVQRFCTNIADEARDRRYMLQSQQLETLKGEVEKRIAA LEEKRREYEDWLARREAFLAKAEENLVQIYSSMRPDAAAERLAEVRIDLAAAILVKLEPRTAGIILNEMNSKAAAALTGI MASAARPEDPS
Specific function: Unknown
COG id: COG3334
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18744; Mature: 18613
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLGNDSRPPASWKAAALTAALLAAGTTGLRGAEANSATSQDEVQRFCTNIADEARDRR CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH YMLQSQQLETLKGEVEKRIAALEEKRREYEDWLARREAFLAKAEENLVQIYSSMRPDAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ERLAEVRIDLAAAILVKLEPRTAGIILNEMNSKAAAALTGIMASAARPEDPS HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SLLGNDSRPPASWKAAALTAALLAAGTTGLRGAEANSATSQDEVQRFCTNIADEARDRR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH YMLQSQQLETLKGEVEKRIAALEEKRREYEDWLARREAFLAKAEENLVQIYSSMRPDAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH ERLAEVRIDLAAAILVKLEPRTAGIILNEMNSKAAAALTGIMASAARPEDPS HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA