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The map label for this gene is motD [H]

Identifier: 110632643

GI number: 110632643

Start: 319794

End: 320972

Strand: Reverse

Name: motD [H]

Synonym: Meso_0282

Alternate gene names: 110632643

Gene position: 320972-319794 (Counterclockwise)

Preceding gene: 110632644

Following gene: 110632642

Centisome position: 7.27

GC content: 59.2

Gene sequence:

>1179_bases
ATGTTTGAGGACGGGTTAGGGCGAGATGAGGCAGAAACGCCCCTAAAGCTGGCCGTGCAGGCGCCCGTCTCGGATGAGCA
GCCGAGATGGCGCCTTGCAGAGAGGGTGTTGGAGTTTTTCCTTCCGCAGAGCGTGCCTCCCCAAAGGAGAACAGATCAGC
TGGACAACGAGGATATCGCCGCCGTCGTGCCGCCAATGCCCGCCAGAATACCGGCTGAGCCGTCGGAAGATATGGGCGAG
GCATCGCCCCCCGAAGCGGAAGCGCATATGGCAGGGCAAGGGATATCGGGAATTTTGAAACAGTCGATTCCCGCCTCGGT
TCAGCAAGAAGCCGAGACGATATGGCGATCGCAGGATACACCATCCGGCGGTTCGGAAATCCACCACAATAAACCGGATG
GGCCTTCAGATGCAGCAGACTTGCGGGCGCGCGACCTAAACATGCAGTTGGAGGGCAGACCCAACGCGGGCGATCCGGAG
CAGCAAAAAAGGCCTGACGGTAAAAAGTCTTCATCTCCAACAAGCTCCTCGCCTATCGACAAAACCGCCGCCGACGGGTT
TGACGAAGCCTTCAGTGGGCGAGCTTCCTCGGGCGAAGCATCGATGCCGGTTCGTGTGATAAGCGCACAGAGCATCCCCG
CGCCTGCTCTCTCCTGGCAGGGTTACGATACTGCCACTGCGAGCCTTCTCGCAGCCTTCCAGGCCGATCCTGCGCTCAAA
ACTGCATATGCCGATGCAACGCAAACACTCGCTATGGCCCATGCAGGTAAAGACCGGACGCTCCACACCCTTAAAATACA
GCTACATCCGGTTCAGCTCGGCAGCGTTACTGCCCAACTCACTATTTCGGGAGATCAACTAAAGGTTGAAATTCAAGTAG
AGAGCTCCGACGCGCGACAGAGGCTCCAGGCCGACGGTGACGACATCCTCCATGCTCTTCGCGCTATGGGATATGATGTT
GATCGCATCACGATCCAGCAGGCTGCTACCGGCACCTCCCCGCAGTCCGGCGCCGGTTCCGGCAACCGGGATTCCTCTTT
TCAGACCGGAGCCAACCAGGGCCAGCAGGGAGACTCCGGCGGCTCCCGAGGGCAGGACGCAAACACGCATGCCGCCCCGC
CGGAAATGACTGAAAGGCGGCAGGATGATGCTGCGGCAAATAACGGCCTCTATATCTAG

Upstream 100 bases:

>100_bases
CGGAGGCTCGCCGGTGACACAATCCATCACGCCGGGCTTTCCGTCCTTACAGAGCGCACTTGAACCTGGCCGTGAGCGCA
GGGCCGCTTCGTCTCAAACA

Downstream 100 bases:

>100_bases
TCTCCTTCTCTCAACGGTCATCGCCGCCGCGAACCCATGCGAAGCGCAAATCCTGCGGGCTTCGCAGAAATATCATATCC
CGGTCGGCATTCTCTACGCG

Product: flagellar hook-length control protein

Products: NA

Alternate protein names: Motility protein D [H]

Number of amino acids: Translated: 392; Mature: 392

Protein sequence:

>392_residues
MFEDGLGRDEAETPLKLAVQAPVSDEQPRWRLAERVLEFFLPQSVPPQRRTDQLDNEDIAAVVPPMPARIPAEPSEDMGE
ASPPEAEAHMAGQGISGILKQSIPASVQQEAETIWRSQDTPSGGSEIHHNKPDGPSDAADLRARDLNMQLEGRPNAGDPE
QQKRPDGKKSSSPTSSSPIDKTAADGFDEAFSGRASSGEASMPVRVISAQSIPAPALSWQGYDTATASLLAAFQADPALK
TAYADATQTLAMAHAGKDRTLHTLKIQLHPVQLGSVTAQLTISGDQLKVEIQVESSDARQRLQADGDDILHALRAMGYDV
DRITIQQAATGTSPQSGAGSGNRDSSFQTGANQGQQGDSGGSRGQDANTHAAPPEMTERRQDDAAANNGLYI

Sequences:

>Translated_392_residues
MFEDGLGRDEAETPLKLAVQAPVSDEQPRWRLAERVLEFFLPQSVPPQRRTDQLDNEDIAAVVPPMPARIPAEPSEDMGE
ASPPEAEAHMAGQGISGILKQSIPASVQQEAETIWRSQDTPSGGSEIHHNKPDGPSDAADLRARDLNMQLEGRPNAGDPE
QQKRPDGKKSSSPTSSSPIDKTAADGFDEAFSGRASSGEASMPVRVISAQSIPAPALSWQGYDTATASLLAAFQADPALK
TAYADATQTLAMAHAGKDRTLHTLKIQLHPVQLGSVTAQLTISGDQLKVEIQVESSDARQRLQADGDDILHALRAMGYDV
DRITIQQAATGTSPQSGAGSGNRDSSFQTGANQGQQGDSGGSRGQDANTHAAPPEMTERRQDDAAANNGLYI
>Mature_392_residues
MFEDGLGRDEAETPLKLAVQAPVSDEQPRWRLAERVLEFFLPQSVPPQRRTDQLDNEDIAAVVPPMPARIPAEPSEDMGE
ASPPEAEAHMAGQGISGILKQSIPASVQQEAETIWRSQDTPSGGSEIHHNKPDGPSDAADLRARDLNMQLEGRPNAGDPE
QQKRPDGKKSSSPTSSSPIDKTAADGFDEAFSGRASSGEASMPVRVISAQSIPAPALSWQGYDTATASLLAAFQADPALK
TAYADATQTLAMAHAGKDRTLHTLKIQLHPVQLGSVTAQLTISGDQLKVEIQVESSDARQRLQADGDDILHALRAMGYDV
DRITIQQAATGTSPQSGAGSGNRDSSFQTGANQGQQGDSGGSRGQDANTHAAPPEMTERRQDDAAANNGLYI

Specific function: Required for the rotation of the flagellar motor. Has a positive effect as flagellar rotation increases when an excess of motd is present [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm. Note=Associated with the inner surface of the motor (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021136 [H]

Pfam domain/function: PF02120 Flg_hook [H]

EC number: NA

Molecular weight: Translated: 41581; Mature: 41581

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS00639 THIOL_PROTEASE_HIS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEDGLGRDEAETPLKLAVQAPVSDEQPRWRLAERVLEFFLPQSVPPQRRTDQLDNEDIA
CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCE
AVVPPMPARIPAEPSEDMGEASPPEAEAHMAGQGISGILKQSIPASVQQEAETIWRSQDT
EECCCCCCCCCCCCCHHCCCCCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCC
PSGGSEIHHNKPDGPSDAADLRARDLNMQLEGRPNAGDPEQQKRPDGKKSSSPTSSSPID
CCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
KTAADGFDEAFSGRASSGEASMPVRVISAQSIPAPALSWQGYDTATASLLAAFQADPALK
HHHHCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
TAYADATQTLAMAHAGKDRTLHTLKIQLHPVQLGSVTAQLTISGDQLKVEIQVESSDARQ
HHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCEEEEEEECCCEEEEEEEECCHHHHH
RLQADGDDILHALRAMGYDVDRITIQQAATGTSPQSGAGSGNRDSSFQTGANQGQQGDSG
HHHCCHHHHHHHHHHHCCCCHHEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSRGQDANTHAAPPEMTERRQDDAAANNGLYI
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFEDGLGRDEAETPLKLAVQAPVSDEQPRWRLAERVLEFFLPQSVPPQRRTDQLDNEDIA
CCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCE
AVVPPMPARIPAEPSEDMGEASPPEAEAHMAGQGISGILKQSIPASVQQEAETIWRSQDT
EECCCCCCCCCCCCCHHCCCCCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHCCCCC
PSGGSEIHHNKPDGPSDAADLRARDLNMQLEGRPNAGDPEQQKRPDGKKSSSPTSSSPID
CCCCCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
KTAADGFDEAFSGRASSGEASMPVRVISAQSIPAPALSWQGYDTATASLLAAFQADPALK
HHHHCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHH
TAYADATQTLAMAHAGKDRTLHTLKIQLHPVQLGSVTAQLTISGDQLKVEIQVESSDARQ
HHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEECCEEEEEEECCCEEEEEEEECCHHHHH
RLQADGDDILHALRAMGYDVDRITIQQAATGTSPQSGAGSGNRDSSFQTGANQGQQGDSG
HHHCCHHHHHHHHHHHCCCCHHEEEEHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSRGQDANTHAAPPEMTERRQDDAAANNGLYI
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9335288 [H]