Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632602
Identifier: 110632602
GI number: 110632602
Start: 272998
End: 275430
Strand: Direct
Name: 110632602
Synonym: Meso_0241
Alternate gene names: NA
Gene position: 272998-275430 (Clockwise)
Preceding gene: 110632601
Following gene: 110632604
Centisome position: 6.19
GC content: 57.05
Gene sequence:
>2433_bases TTGGCAACCATCCCAATCAGAGACGTCCCCGGCAGTCCCGTACAGCCCTCGGGTAGCGAACTCATCCTGATCGACAATGG CATTGCAATGCAAAAGGCCACGATCAACGATGCGGTGACGCCGAAGGCAACCGAAATTGCGGACGCGAAGATTGCCGCAC TAAATCTCGGCACGGCAGCTCAGGCTGATACCTCTGATTTTGCTACCGCTGCACAGGGCGCTCTAGCCGATACTGCCGTT CAGCTGGGGGATTTGGCTGCTGTCGCGACCTCAGGCAATTATAATGACCTGAGCAACCTTCCCACGCTTGGTACAGCCGC AGCAGAGGACGTAAGCGCATTTGCTCCGGCTACAAAAGGCATCCCCGATGGGGGTGCTACAGGCCAAGTTCTCGCCAAAG CCAGCAATGCTAACAACGATGTCAATTGGGTCACGGCGGGTTCTGGCATCAGCAACATCGGTGTTGACCCCTATATGTTC GGCGCGATTGGCGATGGGGTGGCGGACGATCTTGTCCCACTCAATGACATGTTCGCGTATGCAGCGGCCAGCGGTGTACC GGCTTGGATCACGGCGGGCACCTTTGCGTGCATAGCCGGGTCTCCGGTTGTTCCCTCCAACGTCACCGTCTACGGGATTG CTGGCGGGACCATTGTCCAGAAGACGTTGCCGAACACCAATCCTCTGTCCAACTCCGATCCTGGCAACGGCGAGTTCTCC GGGTTGCACATCAATCGTGAAAGTCATGATGTAACGATCGATGGGGTTAGGCTTCGCGGTCCCTACGGCGATATCACTGA AGGCGTAGGGCTCGGGCGCATTGTCGTCAGCAATGGTGGCTCGGGATACACTTCTGCGCCAACGGTGGTCATCACTGGAG GAGGAGGTGTCGGGGCAACGGCGACGGCGAACCTCACCGGGAATGCTGTCACGTCCATTACCGTAACGAACCCAGGTTCC GGCTACACGAGCCGATCGACAATCGTTCTGACCGGAGGCGGCGGAACTGGCGCAACGGCCTATGCGACGACAATCGAGAC GCGCTATCGCTCCATCGGTATCGCCATTTCGGGGCGCTATGACCAGTATTTCTACGAAAACCCGAACTATCCCGGCAACC CGAATGCTCCGCTTGCCGCCCCCTGCCGCAACATCTTCATTCGCAATTGCGATATCGAGGGCTTCGGCCAATCGGGCATT TTGGCTGATCACATCGTCAACTTCGAGGCGATCAACAATCATATTCGCCGCTGCGGTCGCGACGGCATTCGAACTTATGG CGTCGTCAATCCGCGCATCTTTGGCAACGACATAGACGAGATAGCACCTGGCTTCCTGGGCGAAGGAACCTACCCGAACA ACAACGTCTACGGTATCGAACTGACGCGGATCTATCATTCAACGGCAGGCGATGGAACGCTCACCGATTACCCGCCCTCG CGCGACGGTATCGTCATCGGCAACACGATCAAGAACTGCTGGTCGTGGAAATCGATAGGGGTCCATGGTTCGGTGAACAT CGGTTTCTACCAAAACCGTTGCCGCGATAGCTACATTGGCTTGGGCATCGACAAAGGTGGATTCGACCTCGCCGACGGAT ATGCGCCGCCTGTCGATATCAAGGAAGACGGGAACACGTTTGAGATAACATCCGCCTTCCCGCTAACCCCTCGCACCGGC ATCTTCCTGACGGCGCACGACGGGACCGCGAACAATATCGGGCGTGGAAACTGCCTGGGCAGCAGCACTACTATCGGCTA CGGGCGCGATGGCGCAGAAGGAGCAATCTATATCGGCAATCAGCGTGACGGGAAGTGTATCGGGCCGACGCTGCGAAACA GCCTGCGAGCCGCAATCGTCCTGCGTGAAACCGTGGATGATTTCACCGTAGACAACTATACGATTGAAGATGTGCGCCAG AGCACCTTGGGGATGTGTGTCGCCATCAGCGTTGAGTCCAGTACCGTTCGGGCTAACATCGGCACGGGTACAATAACGCA ATCATTGGCTGCGGTGCTAACACCTTACAACTTCGCCAATGCAGCGTCCGGTTACGGCTGCCATCTCGAAACAGGAACCA TATTCGACGGGAATGTCGGCTTGCCTTCTAACGCCGGAGCGCTGGATGGTGGGACTTATGTCCTGGCGCCGCGTGCGTGG GCGAACGTCAATGTTAGCGGAGGAGTTGCCTCGTTGAGCTCCTTCAAAGGCGTGGCCTCTGTTGCGCGCCAGGCGCAAGG CGTTGTCCGTGTTGTTTTAGAGCGCGCCATGAGTGTGGTTAACACTTATGTTGTGGTCGCTGTCCCGAAAGGGAGCGGCC CCTACCAAGCCACTTTCAACGCAATCGACAGTTCTACCTTCGACATCTATGTTAAAGACAACGCGGGGGCCAACCAGGAC ATAGGATTTGTCTGTCTCGTAACGGGCTATTAA
Upstream 100 bases:
>100_bases ATCGTGAACAAGATTATCAAAGCCGCCTATTAAGCAGACCCCTCCGCCACGTGCACACAAACCGCCTTCTGAGGCGGTTT TTTCGTTTGGAGATTTCATC
Downstream 100 bases:
>100_bases ACAGGGCTCGGTGAACTTAACGGATAGTCCCGCCTGTATCCGAGGAGGGCGACCAGCTCGTCATACAGGGGGTCATCGAT TATATCCCTGACGAGCCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 810; Mature: 809
Protein sequence:
>810_residues MATIPIRDVPGSPVQPSGSELILIDNGIAMQKATINDAVTPKATEIADAKIAALNLGTAAQADTSDFATAAQGALADTAV QLGDLAAVATSGNYNDLSNLPTLGTAAAEDVSAFAPATKGIPDGGATGQVLAKASNANNDVNWVTAGSGISNIGVDPYMF GAIGDGVADDLVPLNDMFAYAAASGVPAWITAGTFACIAGSPVVPSNVTVYGIAGGTIVQKTLPNTNPLSNSDPGNGEFS GLHINRESHDVTIDGVRLRGPYGDITEGVGLGRIVVSNGGSGYTSAPTVVITGGGGVGATATANLTGNAVTSITVTNPGS GYTSRSTIVLTGGGGTGATAYATTIETRYRSIGIAISGRYDQYFYENPNYPGNPNAPLAAPCRNIFIRNCDIEGFGQSGI LADHIVNFEAINNHIRRCGRDGIRTYGVVNPRIFGNDIDEIAPGFLGEGTYPNNNVYGIELTRIYHSTAGDGTLTDYPPS RDGIVIGNTIKNCWSWKSIGVHGSVNIGFYQNRCRDSYIGLGIDKGGFDLADGYAPPVDIKEDGNTFEITSAFPLTPRTG IFLTAHDGTANNIGRGNCLGSSTTIGYGRDGAEGAIYIGNQRDGKCIGPTLRNSLRAAIVLRETVDDFTVDNYTIEDVRQ STLGMCVAISVESSTVRANIGTGTITQSLAAVLTPYNFANAASGYGCHLETGTIFDGNVGLPSNAGALDGGTYVLAPRAW ANVNVSGGVASLSSFKGVASVARQAQGVVRVVLERAMSVVNTYVVVAVPKGSGPYQATFNAIDSSTFDIYVKDNAGANQD IGFVCLVTGY
Sequences:
>Translated_810_residues MATIPIRDVPGSPVQPSGSELILIDNGIAMQKATINDAVTPKATEIADAKIAALNLGTAAQADTSDFATAAQGALADTAV QLGDLAAVATSGNYNDLSNLPTLGTAAAEDVSAFAPATKGIPDGGATGQVLAKASNANNDVNWVTAGSGISNIGVDPYMF GAIGDGVADDLVPLNDMFAYAAASGVPAWITAGTFACIAGSPVVPSNVTVYGIAGGTIVQKTLPNTNPLSNSDPGNGEFS GLHINRESHDVTIDGVRLRGPYGDITEGVGLGRIVVSNGGSGYTSAPTVVITGGGGVGATATANLTGNAVTSITVTNPGS GYTSRSTIVLTGGGGTGATAYATTIETRYRSIGIAISGRYDQYFYENPNYPGNPNAPLAAPCRNIFIRNCDIEGFGQSGI LADHIVNFEAINNHIRRCGRDGIRTYGVVNPRIFGNDIDEIAPGFLGEGTYPNNNVYGIELTRIYHSTAGDGTLTDYPPS RDGIVIGNTIKNCWSWKSIGVHGSVNIGFYQNRCRDSYIGLGIDKGGFDLADGYAPPVDIKEDGNTFEITSAFPLTPRTG IFLTAHDGTANNIGRGNCLGSSTTIGYGRDGAEGAIYIGNQRDGKCIGPTLRNSLRAAIVLRETVDDFTVDNYTIEDVRQ STLGMCVAISVESSTVRANIGTGTITQSLAAVLTPYNFANAASGYGCHLETGTIFDGNVGLPSNAGALDGGTYVLAPRAW ANVNVSGGVASLSSFKGVASVARQAQGVVRVVLERAMSVVNTYVVVAVPKGSGPYQATFNAIDSSTFDIYVKDNAGANQD IGFVCLVTGY >Mature_809_residues ATIPIRDVPGSPVQPSGSELILIDNGIAMQKATINDAVTPKATEIADAKIAALNLGTAAQADTSDFATAAQGALADTAVQ LGDLAAVATSGNYNDLSNLPTLGTAAAEDVSAFAPATKGIPDGGATGQVLAKASNANNDVNWVTAGSGISNIGVDPYMFG AIGDGVADDLVPLNDMFAYAAASGVPAWITAGTFACIAGSPVVPSNVTVYGIAGGTIVQKTLPNTNPLSNSDPGNGEFSG LHINRESHDVTIDGVRLRGPYGDITEGVGLGRIVVSNGGSGYTSAPTVVITGGGGVGATATANLTGNAVTSITVTNPGSG YTSRSTIVLTGGGGTGATAYATTIETRYRSIGIAISGRYDQYFYENPNYPGNPNAPLAAPCRNIFIRNCDIEGFGQSGIL ADHIVNFEAINNHIRRCGRDGIRTYGVVNPRIFGNDIDEIAPGFLGEGTYPNNNVYGIELTRIYHSTAGDGTLTDYPPSR DGIVIGNTIKNCWSWKSIGVHGSVNIGFYQNRCRDSYIGLGIDKGGFDLADGYAPPVDIKEDGNTFEITSAFPLTPRTGI FLTAHDGTANNIGRGNCLGSSTTIGYGRDGAEGAIYIGNQRDGKCIGPTLRNSLRAAIVLRETVDDFTVDNYTIEDVRQS TLGMCVAISVESSTVRANIGTGTITQSLAAVLTPYNFANAASGYGCHLETGTIFDGNVGLPSNAGALDGGTYVLAPRAWA NVNVSGGVASLSSFKGVASVARQAQGVVRVVLERAMSVVNTYVVVAVPKGSGPYQATFNAIDSSTFDIYVKDNAGANQDI GFVCLVTGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83346; Mature: 83215
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIPIRDVPGSPVQPSGSELILIDNGIAMQKATINDAVTPKATEIADAKIAALNLGTAA CCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHCCCEEEEEECCCCC QADTSDFATAAQGALADTAVQLGDLAAVATSGNYNDLSNLPTLGTAAAEDVSAFAPATKG CCCCCHHHHHHCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCC IPDGGATGQVLAKASNANNDVNWVTAGSGISNIGVDPYMFGAIGDGVADDLVPLNDMFAY CCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCHHCCCCHHHHHHH AAASGVPAWITAGTFACIAGSPVVPSNVTVYGIAGGTIVQKTLPNTNPLSNSDPGNGEFS HHHCCCCEEEECCEEEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEE GLHINRESHDVTIDGVRLRGPYGDITEGVGLGRIVVSNGGSGYTSAPTVVITGGGGVGAT EEEECCCCCEEEEEEEEEECCCCCHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCE ATANLTGNAVTSITVTNPGSGYTSRSTIVLTGGGGTGATAYATTIETRYRSIGIAISGRY EEEECCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEEEEEEEECCC DQYFYENPNYPGNPNAPLAAPCRNIFIRNCDIEGFGQSGILADHIVNFEAINNHIRRCGR CCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC DGIRTYGVVNPRIFGNDIDEIAPGFLGEGTYPNNNVYGIELTRIYHSTAGDGTLTDYPPS CCCEEEEEECCEECCCCHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC RDGIVIGNTIKNCWSWKSIGVHGSVNIGFYQNRCRDSYIGLGIDKGGFDLADGYAPPVDI CCCEEECCCHHHHCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCC KEDGNTFEITSAFPLTPRTGIFLTAHDGTANNIGRGNCLGSSTTIGYGRDGAEGAIYIGN CCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECC QRDGKCIGPTLRNSLRAAIVLRETVDDFTVDNYTIEDVRQSTLGMCVAISVESSTVRANI CCCCCEECHHHHHCCEEEEEEEECCCCEECCCEEHHHHHHHHCCEEEEEEECCCEEEEEC GTGTITQSLAAVLTPYNFANAASGYGCHLETGTIFDGNVGLPSNAGALDGGTYVLAPRAW CCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEECCCCE ANVNVSGGVASLSSFKGVASVARQAQGVVRVVLERAMSVVNTYVVVAVPKGSGPYQATFN EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCEEEEE AIDSSTFDIYVKDNAGANQDIGFVCLVTGY ECCCCEEEEEEECCCCCCCCCEEEEEEECC >Mature Secondary Structure ATIPIRDVPGSPVQPSGSELILIDNGIAMQKATINDAVTPKATEIADAKIAALNLGTAA CCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCHHHCCCEEEEEECCCCC QADTSDFATAAQGALADTAVQLGDLAAVATSGNYNDLSNLPTLGTAAAEDVSAFAPATKG CCCCCHHHHHHCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCCC IPDGGATGQVLAKASNANNDVNWVTAGSGISNIGVDPYMFGAIGDGVADDLVPLNDMFAY CCCCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEECCCCCCHHCCCCHHHHHHH AAASGVPAWITAGTFACIAGSPVVPSNVTVYGIAGGTIVQKTLPNTNPLSNSDPGNGEFS HHHCCCCEEEECCEEEEECCCCCCCCCEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEE GLHINRESHDVTIDGVRLRGPYGDITEGVGLGRIVVSNGGSGYTSAPTVVITGGGGVGAT EEEECCCCCEEEEEEEEEECCCCCHHCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCCE ATANLTGNAVTSITVTNPGSGYTSRSTIVLTGGGGTGATAYATTIETRYRSIGIAISGRY EEEECCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEEEEEEEECCC DQYFYENPNYPGNPNAPLAAPCRNIFIRNCDIEGFGQSGILADHIVNFEAINNHIRRCGR CCEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHCCHHHHHHHHHHHCC DGIRTYGVVNPRIFGNDIDEIAPGFLGEGTYPNNNVYGIELTRIYHSTAGDGTLTDYPPS CCCEEEEEECCEECCCCHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCC RDGIVIGNTIKNCWSWKSIGVHGSVNIGFYQNRCRDSYIGLGIDKGGFDLADGYAPPVDI CCCEEECCCHHHHCCCCCCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCCCCCC KEDGNTFEITSAFPLTPRTGIFLTAHDGTANNIGRGNCLGSSTTIGYGRDGAEGAIYIGN CCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCEEEEECC QRDGKCIGPTLRNSLRAAIVLRETVDDFTVDNYTIEDVRQSTLGMCVAISVESSTVRANI CCCCCEECHHHHHCCEEEEEEEECCCCEECCCEEHHHHHHHHCCEEEEEEECCCEEEEEC GTGTITQSLAAVLTPYNFANAASGYGCHLETGTIFDGNVGLPSNAGALDGGTYVLAPRAW CCCHHHHHHHHHHCCCCCCCCCCCCCEEEECCEEEECCCCCCCCCCCCCCCEEEECCCCE ANVNVSGGVASLSSFKGVASVARQAQGVVRVVLERAMSVVNTYVVVAVPKGSGPYQATFN EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCEEEEE AIDSSTFDIYVKDNAGANQDIGFVCLVTGY ECCCCEEEEEEECCCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA