Definition Mesorhizobium sp. BNC1, complete genome.
Accession NC_008254
Length 4,412,446

Click here to switch to the map view.

The map label for this gene is 110632568

Identifier: 110632568

GI number: 110632568

Start: 243685

End: 244188

Strand: Direct

Name: 110632568

Synonym: Meso_0206

Alternate gene names: NA

Gene position: 243685-244188 (Clockwise)

Preceding gene: 110632546

Following gene: 110632571

Centisome position: 5.52

GC content: 59.72

Gene sequence:

>504_bases
TTGCGCGCGAAGCTCTTGGATTCTCTTGGTGTTGGCGTATTTGCCGTCTCGGAGATCGTTCGGGAGGTTTGCTGCCTCTG
CGAGATCGAGGGCTTCATGGAAGAGATCGGCCCTGACGTATTCCGTGCAGCCGTTCTGCTCCCGGCTTTCACCGACAACA
GTCAGATACGGCTTGCCGGATGGGAGAGAGACGCCACCGCCACGGACGCGCGCCCAGATCCGTTCGGGCATTCCGCTGTG
TTCTGCTTGGGAGGCGTGTTGGAGGGATCGGGTCATGCGGCCTCCTCCTCCACCCTGCGTCTTAAAGCCTCGAATGTACG
TTCGGTGCAGAAGATCACCCGGCCCTTCACGGCCACCGTCTCATCATCGACCGTGATTGCTTCACCGGAACGCTCGTCAG
TGATTGTAGTGCCAGCGTCCACCTGCATCACGTGCATAGACCCGATAGGAACAGTGTGGTATTCAGACGGGGAGAGGGTC
ATGGGCGCTTCCCCTCGGCTTTAG

Upstream 100 bases:

>100_bases
GGCCTCATACTCTGTTCGCCCTGGCTGCTTTTCGAACACGCTAGGTTCGTCCAGCCTTTGTGCTGTCTCAGCCATTGCTC
TCTCCTGACAGCTTCACCAA

Downstream 100 bases:

>100_bases
CTATGGCTTTGTCAGCTATGGCTTTGATGTTCCGATAGGTTTCCGCTCGCCTCGTGCCACAAGGGCCGGGGTGAACAAAA
TAGTCGTCGCATGGGTGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MRAKLLDSLGVGVFAVSEIVREVCCLCEIEGFMEEIGPDVFRAAVLLPAFTDNSQIRLAGWERDATATDARPDPFGHSAV
FCLGGVLEGSGHAASSSTLRLKASNVRSVQKITRPFTATVSSSTVIASPERSSVIVVPASTCITCIDPIGTVWYSDGERV
MGASPRL

Sequences:

>Translated_167_residues
MRAKLLDSLGVGVFAVSEIVREVCCLCEIEGFMEEIGPDVFRAAVLLPAFTDNSQIRLAGWERDATATDARPDPFGHSAV
FCLGGVLEGSGHAASSSTLRLKASNVRSVQKITRPFTATVSSSTVIASPERSSVIVVPASTCITCIDPIGTVWYSDGERV
MGASPRL
>Mature_167_residues
MRAKLLDSLGVGVFAVSEIVREVCCLCEIEGFMEEIGPDVFRAAVLLPAFTDNSQIRLAGWERDATATDARPDPFGHSAV
FCLGGVLEGSGHAASSSTLRLKASNVRSVQKITRPFTATVSSSTVIASPERSSVIVVPASTCITCIDPIGTVWYSDGERV
MGASPRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17690; Mature: 17690

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAKLLDSLGVGVFAVSEIVREVCCLCEIEGFMEEIGPDVFRAAVLLPAFTDNSQIRLAG
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEECCCCEEEEEE
WERDATATDARPDPFGHSAVFCLGGVLEGSGHAASSSTLRLKASNVRSVQKITRPFTATV
CCCCCCCCCCCCCCCCCHHHHHHCEEECCCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEC
SSSTVIASPERSSVIVVPASTCITCIDPIGTVWYSDGERVMGASPRL
CCCEEEECCCCCEEEEEECCHHHHHHCCCCEEEECCCCEECCCCCCC
>Mature Secondary Structure
MRAKLLDSLGVGVFAVSEIVREVCCLCEIEGFMEEIGPDVFRAAVLLPAFTDNSQIRLAG
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHEEECCCCEEEEEE
WERDATATDARPDPFGHSAVFCLGGVLEGSGHAASSSTLRLKASNVRSVQKITRPFTATV
CCCCCCCCCCCCCCCCCHHHHHHCEEECCCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEC
SSSTVIASPERSSVIVVPASTCITCIDPIGTVWYSDGERVMGASPRL
CCCEEEECCCCCEEEEEECCHHHHHHCCCCEEEECCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA