| Definition | Mesorhizobium sp. BNC1, complete genome. |
|---|---|
| Accession | NC_008254 |
| Length | 4,412,446 |
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The map label for this gene is 110632550
Identifier: 110632550
GI number: 110632550
Start: 231275
End: 231775
Strand: Reverse
Name: 110632550
Synonym: Meso_0188
Alternate gene names: NA
Gene position: 231775-231275 (Counterclockwise)
Preceding gene: 110632551
Following gene: 110632549
Centisome position: 5.25
GC content: 60.28
Gene sequence:
>501_bases ATGACCATGACATCGCAGTTTTCCGGAGGCCATCCAGGCATAAGGCCATCGGGTGTGAGGGACACGAGGCCACGCTCGGT GCTCTTTCTTTGCGGGCGCAATTCCATCCGCTCGCCCCTGGCCGAAGCGCTTGCAAAGCACATGCTGCCAAGATCTATCT TCATTGCCTCGGCTGGCGTGCGCAAAGGGCCGCGCGATCCCTTTGTCGACTCGGTTCTGGCGGAAGAAAACCTTGCTCTG GAGAACTGGGTGCCGCGCCGGCTGGAGGAACTGGAGGACACGTTTTTCGATCTCATCGTCACACTCGCACCGGAAGCGCA CCACGCCGCATTGGAGCTCACACGCACCATGCCTGTCGAGGTGGAGTACTGGCCGACACTCGATCCTTCCGCGGTCGAGG GGACGCGTGATCAGATCATGGCCGCCTACCGGGACGTGCGAAACGCGATTGCCGTGCAAATTGCCGAAAGGTTCGGGCTG GCATTCACTGACGAAACATGA
Upstream 100 bases:
>100_bases GATCACAGACATTGATGGATCGCCTCAATGGAAAGATCGAGGTGGATTTCAACACGGCCCGGCGGCTCTTCACCTTGATC TGCGTGTTGCATTGGCGAAG
Downstream 100 bases:
>100_bases CTGTTGCTTGTTCACAAATGGTGGAGGATGGGCTAGGTTCCGCGCGATTTCGGCTTGGCCCCTTAATCTCCCGAGCTCTG CAACGGTGAAAGAACCGGCC
Product: protein tyrosine phosphatase
Products: NA
Alternate protein names: Arsenate Reductase; Low Molecular Weight Phosphotyrosine Protein Phosphatase; Protein-Tyrosine Phosphatase Low Molecular Weight; Arsenate Reductase Protein; Protein-Tyrosine-Phosphatase; Phosphotyrosine Protein Phosphatase; ArsC Protein; Protein-Tyrosine Phosphatase; Low Molecular Weight Tyrosine Phosphatase Protein
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTMTSQFSGGHPGIRPSGVRDTRPRSVLFLCGRNSIRSPLAEALAKHMLPRSIFIASAGVRKGPRDPFVDSVLAEENLAL ENWVPRRLEELEDTFFDLIVTLAPEAHHAALELTRTMPVEVEYWPTLDPSAVEGTRDQIMAAYRDVRNAIAVQIAERFGL AFTDET
Sequences:
>Translated_166_residues MTMTSQFSGGHPGIRPSGVRDTRPRSVLFLCGRNSIRSPLAEALAKHMLPRSIFIASAGVRKGPRDPFVDSVLAEENLAL ENWVPRRLEELEDTFFDLIVTLAPEAHHAALELTRTMPVEVEYWPTLDPSAVEGTRDQIMAAYRDVRNAIAVQIAERFGL AFTDET >Mature_165_residues TMTSQFSGGHPGIRPSGVRDTRPRSVLFLCGRNSIRSPLAEALAKHMLPRSIFIASAGVRKGPRDPFVDSVLAEENLALE NWVPRRLEELEDTFFDLIVTLAPEAHHAALELTRTMPVEVEYWPTLDPSAVEGTRDQIMAAYRDVRNAIAVQIAERFGLA FTDET
Specific function: Unknown
COG id: COG0394
COG function: function code T; Protein-tyrosine-phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18488; Mature: 18357
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTSQFSGGHPGIRPSGVRDTRPRSVLFLCGRNSIRSPLAEALAKHMLPRSIFIASAGV CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHEECCCC RKGPRDPFVDSVLAEENLALENWVPRRLEELEDTFFDLIVTLAPEAHHAALELTRTMPVE CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEE VEYWPTLDPSAVEGTRDQIMAAYRDVRNAIAVQIAERFGLAFTDET EEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TMTSQFSGGHPGIRPSGVRDTRPRSVLFLCGRNSIRSPLAEALAKHMLPRSIFIASAGV CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHEECCCC RKGPRDPFVDSVLAEENLALENWVPRRLEELEDTFFDLIVTLAPEAHHAALELTRTMPVE CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEE VEYWPTLDPSAVEGTRDQIMAAYRDVRNAIAVQIAERFGLAFTDET EEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA