Definition | Mesorhizobium sp. BNC1, complete genome. |
---|---|
Accession | NC_008254 |
Length | 4,412,446 |
Click here to switch to the map view.
The map label for this gene is folD
Identifier: 110632514
GI number: 110632514
Start: 185429
End: 186325
Strand: Direct
Name: folD
Synonym: Meso_0152
Alternate gene names: 110632514
Gene position: 185429-186325 (Clockwise)
Preceding gene: 110632511
Following gene: 110632517
Centisome position: 4.2
GC content: 61.76
Gene sequence:
>897_bases ATGGTGCAGATTATTGATGGAAAGGCCGTCGCTGCAACGATCCTGGAAAAGGTGACACGCGAAACTCAGGACCTCAAGGC AAATGGCGTTACGCCCGGCCTGGCGGTCGTGATCGTGGGCGAGGATCCTGCAAGCCAGGTCTATGTGGCCTCCAAGGGGC GGAAGGCAACCGAGTGCGGTTTTCACTCGGTACAGCATTCGCTGCCGGAGAACACCTCCGAAGAGGAGCTTGTTTCACTG GTGGAAGCCCTCAACCGCGATCCGGCAATTCACGGCATCCTCGTCCAGCTTCCGCTTCCCAAGCAGATCGATTCTGAACG CATTATCCACACGATCGCGCCGGAAAAGGATGTCGACGGCTTCCATATTCTGAATGTCGGCATGCTTGGCACCGGCGCGG TCACCAAGGCCCTGGTGCCCTGCACGCCAGCCGGTGCGATGCTTCTTATCGAGGGCGTGCGCGGCAAGGATCTTTCGGGA CTGTCCGCCGTCGTCATCGGCCGCTCGAATATCGTGGGCAAGCCAATGGCCAATCTGCTGCTCGCCGCCAACGCCACGGT TACGATCGCGCACAGCCGAACCGCCGACCTGCCGGCGGCGTGCCGCGGCGCGGACATTCTGGTTGCGGCGGTTGGGCGGC CGGAAATGGTGAAGGGCGATTGGATCAAGCCCGGCGCTACCGTTATCGACGTCGGCGTAAGCCGGATTCCCGCGCCCGAA AAAGGCGAGGGCAAGATGAAGCTTGTTGGCGACGTGGCCTATGCCGAGGCGGAGAAGGTGGCCGGAGCTATCACGCCGGT GCCCGGAGGTGTAGGCCCGATGACCATCGCCATGCTGATGGCCAATACGTTGGCGGCAGCTTCGAAAGCTTCCGGTCGCG ATTTGCCTGCATTCTGA
Upstream 100 bases:
>100_bases ACGCTAACGGCTGCGGCAATAAGCGGGGCGACCATGCCGTTGCACGCGCGGGCTTTTGCCGCTTATGTGAGTAATGGGCA GCCGGAGGAGCGAGTTATCC
Downstream 100 bases:
>100_bases AGCGAGCTTAAAAGAGCAGCATCCGCCACGCCAGTCCAGCAAGCGCGGCAGAGAAAAGGACCGCGGCAAGCGGCGCTCTG AAAAGGAAAATCGCAAGAAG
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase
Number of amino acids: Translated: 298; Mature: 298
Protein sequence:
>298_residues MVQIIDGKAVAATILEKVTRETQDLKANGVTPGLAVVIVGEDPASQVYVASKGRKATECGFHSVQHSLPENTSEEELVSL VEALNRDPAIHGILVQLPLPKQIDSERIIHTIAPEKDVDGFHILNVGMLGTGAVTKALVPCTPAGAMLLIEGVRGKDLSG LSAVVIGRSNIVGKPMANLLLAANATVTIAHSRTADLPAACRGADILVAAVGRPEMVKGDWIKPGATVIDVGVSRIPAPE KGEGKMKLVGDVAYAEAEKVAGAITPVPGGVGPMTIAMLMANTLAAASKASGRDLPAF
Sequences:
>Translated_298_residues MVQIIDGKAVAATILEKVTRETQDLKANGVTPGLAVVIVGEDPASQVYVASKGRKATECGFHSVQHSLPENTSEEELVSL VEALNRDPAIHGILVQLPLPKQIDSERIIHTIAPEKDVDGFHILNVGMLGTGAVTKALVPCTPAGAMLLIEGVRGKDLSG LSAVVIGRSNIVGKPMANLLLAANATVTIAHSRTADLPAACRGADILVAAVGRPEMVKGDWIKPGATVIDVGVSRIPAPE KGEGKMKLVGDVAYAEAEKVAGAITPVPGGVGPMTIAMLMANTLAAASKASGRDLPAF >Mature_298_residues MVQIIDGKAVAATILEKVTRETQDLKANGVTPGLAVVIVGEDPASQVYVASKGRKATECGFHSVQHSLPENTSEEELVSL VEALNRDPAIHGILVQLPLPKQIDSERIIHTIAPEKDVDGFHILNVGMLGTGAVTKALVPCTPAGAMLLIEGVRGKDLSG LSAVVIGRSNIVGKPMANLLLAANATVTIAHSRTADLPAACRGADILVAAVGRPEMVKGDWIKPGATVIDVGVSRIPAPE KGEGKMKLVGDVAYAEAEKVAGAITPVPGGVGPMTIAMLMANTLAAASKASGRDLPAF
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=291, Percent_Identity=47.4226804123711, Blast_Score=260, Evalue=1e-69, Organism=Homo sapiens, GI222418558, Length=297, Percent_Identity=43.7710437710438, Blast_Score=208, Evalue=4e-54, Organism=Homo sapiens, GI94721354, Length=297, Percent_Identity=44.1077441077441, Blast_Score=202, Evalue=2e-52, Organism=Homo sapiens, GI36796743, Length=205, Percent_Identity=26.8292682926829, Blast_Score=78, Evalue=8e-15, Organism=Escherichia coli, GI1786741, Length=286, Percent_Identity=51.7482517482517, Blast_Score=261, Evalue=4e-71, Organism=Caenorhabditis elegans, GI17568735, Length=260, Percent_Identity=45.3846153846154, Blast_Score=212, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6321643, Length=297, Percent_Identity=44.4444444444444, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6319558, Length=289, Percent_Identity=44.2906574394464, Blast_Score=238, Evalue=1e-63, Organism=Saccharomyces cerevisiae, GI6322933, Length=305, Percent_Identity=24.5901639344262, Blast_Score=76, Evalue=8e-15, Organism=Drosophila melanogaster, GI24645718, Length=295, Percent_Identity=49.1525423728814, Blast_Score=253, Evalue=1e-67, Organism=Drosophila melanogaster, GI17137370, Length=295, Percent_Identity=49.1525423728814, Blast_Score=253, Evalue=1e-67, Organism=Drosophila melanogaster, GI62472483, Length=295, Percent_Identity=49.1525423728814, Blast_Score=252, Evalue=2e-67, Organism=Drosophila melanogaster, GI45551871, Length=295, Percent_Identity=49.1525423728814, Blast_Score=252, Evalue=2e-67, Organism=Drosophila melanogaster, GI17136816, Length=300, Percent_Identity=48.3333333333333, Blast_Score=248, Evalue=4e-66, Organism=Drosophila melanogaster, GI17136818, Length=300, Percent_Identity=48.3333333333333, Blast_Score=247, Evalue=6e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FOLD_MESSB (Q11M18)
Other databases:
- EMBL: CP000390 - RefSeq: YP_672722.1 - ProteinModelPortal: Q11M18 - SMR: Q11M18 - STRING: Q11M18 - GeneID: 4179615 - GenomeReviews: CP000390_GR - KEGG: mes:Meso_0152 - NMPDR: fig|266779.1.peg.3311 - eggNOG: COG0190 - HOGENOM: HBG328751 - OMA: MIMIERI - PhylomeDB: Q11M18 - ProtClustDB: PRK14188 - BioCyc: MSP266779:MESO_0152-MONOMER - GO: GO:0005488 - HAMAP: MF_01576 - InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 - Gene3D: G3DSA:3.40.50.720 - PRINTS: PR00085
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C
EC number: =1.5.1.5; =3.5.4.9
Molecular weight: Translated: 30669; Mature: 30669
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: PS00766 THF_DHG_CYH_1; PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQIIDGKAVAATILEKVTRETQDLKANGVTPGLAVVIVGEDPASQVYVASKGRKATECG CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCHHHHH FHSVQHSLPENTSEEELVSLVEALNRDPAIHGILVQLPLPKQIDSERIIHTIAPEKDVDG HHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCC FHILNVGMLGTGAVTKALVPCTPAGAMLLIEGVRGKDLSGLSAVVIGRSNIVGKPMANLL EEEEEECCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHE LAANATVTIAHSRTADLPAACRGADILVAAVGRPEMVKGDWIKPGATVIDVGVSRIPAPE EECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCEEEECCHHHCCCCC KGEGKMKLVGDVAYAEAEKVAGAITPVPGGVGPMTIAMLMANTLAAASKASGRDLPAF CCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MVQIIDGKAVAATILEKVTRETQDLKANGVTPGLAVVIVGEDPASQVYVASKGRKATECG CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCCCHHHHH FHSVQHSLPENTSEEELVSLVEALNRDPAIHGILVQLPLPKQIDSERIIHTIAPEKDVDG HHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCC FHILNVGMLGTGAVTKALVPCTPAGAMLLIEGVRGKDLSGLSAVVIGRSNIVGKPMANLL EEEEEECCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCCCCHHHHE LAANATVTIAHSRTADLPAACRGADILVAAVGRPEMVKGDWIKPGATVIDVGVSRIPAPE EECCCEEEEEECCCCCCCCCCCCCEEEEEECCCCCEECCCCCCCCCEEEECCHHHCCCCC KGEGKMKLVGDVAYAEAEKVAGAITPVPGGVGPMTIAMLMANTLAAASKASGRDLPAF CCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA