Definition | Mesorhizobium sp. BNC1, complete genome. |
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Accession | NC_008254 |
Length | 4,412,446 |
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The map label for this gene is 110632501
Identifier: 110632501
GI number: 110632501
Start: 173261
End: 174493
Strand: Direct
Name: 110632501
Synonym: Meso_0139
Alternate gene names: NA
Gene position: 173261-174493 (Clockwise)
Preceding gene: 110632499
Following gene: 110632502
Centisome position: 3.93
GC content: 62.69
Gene sequence:
>1233_bases ATGTCCGACAGGACTAGTGCTGAGCGCGCCGCGCCGCGGAAGGCACCGGCTTTCCTGAAGATGCCGCGCGGCGTTGTGAT TGTCGGTGGAGCGCACGGAACGCTGGCTCTCGCGCGCAGCCTTGGCCGCCTCAACATTCCCGTATGGCTCGTCACGAACG ACAACCCGCTGCCCGGCTGGTCGCGCTATGTGCACCGTATGCTTTCCTGGCCGGGAGCCAACGATCCCGGTGCTGTTGCA TTCCTGCTGGAAATGGCGTTGAGGCATGGGTTGAGTGGCTTCCTGCTCGTGCCGGCGGCCGATGCGGATGTCCGCCTCGT CTCTCAGTCGGTGGACGCGCTTTCAGCTGCGTATCGGGTCATCCTTCCGGATTGGGAGCGGCTGAAATGGGTCTGCGAGA AGCCGCTTCTCTACCGCCGCGCTGCCGAGCTCGGAGTGGATTTTCCACCCACTTACGGGTTTTCCTCCCTTGAGGAAGCT TCCCAGGCCGATATCCGCTTTCCCGTGGTGCTCAAGCCGAATATGGGCGGGGGACACGACGAGTTCTCCCGCGCCAAGGT CATCCGCGCGGACGACAGGGAATTGTTCCTCACCGCCTACCGAACGGCGGCGGAGCAGATCGGCTTCGAGAATGTGGTGG TCCAGGAGCTGATCCCCGGAGGTGGTGAAAGCCAGTTCTCCTACGCGGCCCTCTGGAACGAGGGCAGGCCGGTCGCTGAA TTCGCCGCACGGCGCCTTAGGCAGTTTCCGGTGGATTTCGGATATACGAGCACCTTCGTAAAGGTAGTGGAGGAGCCGCG TGTGATCGAAGCCGCGCGGCGCATCCTGAGTTCGATCGGCCATTGCGGGCTGGTCGAGGTGGAATTCAAATACGACGCGC GAGACGATAGGATGAGAGTGCTCGACGTTAACCCGCGGCCATGGTCCTGGTTCGGACTGACAGCCGCCGCGGGCGCGGAT TTTGGCGCCATGCTCTGGAGCATGGGAATAGGCGAAGAGCCTGTGCCGGCCCGTGCACGGCCAAATGTTTCGTGGATGTA CCTGCTGCGGGATCTGGTGACGGGCATAAAGCTGGTCTCGATGGGCCGGCTTTCCGCGGCCGAGTATCTTCGCTCCTTCT CCAGCGTTCGGACATGGGCAACATTTTCGCTACACGATCCCGTGCCGGCCTTGATCGATGTGCCGCTGACGGCGTGGCGC GTCATCACCCGGCGTATCCTGAAGATCCGTTGA
Upstream 100 bases:
>100_bases AGCCGATGCGCCGGGGGAGCGCTTTTTTAACGGGCGGTGACTATTGTCTCCCTGGCAAAAAGGCGGGTTTGCATAGGGGG ACCTCCGGGTGCTGTACAGA
Downstream 100 bases:
>100_bases CGGGAGCCAATTCGCCTATGCCCGACCTTCCAGGGCAGCAAGCCCTGAAATACCTCATTATTCGAGCTGTGCTGAATGCC ATCGCCTTTTCCGGGGCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: ATP-Grasp -Like Protein; ATP-Grasp -Like; Biotin Carboxylase-Like Protein; Protein Tyrosine Phosphatase; ATP-Grasp Protein
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MSDRTSAERAAPRKAPAFLKMPRGVVIVGGAHGTLALARSLGRLNIPVWLVTNDNPLPGWSRYVHRMLSWPGANDPGAVA FLLEMALRHGLSGFLLVPAADADVRLVSQSVDALSAAYRVILPDWERLKWVCEKPLLYRRAAELGVDFPPTYGFSSLEEA SQADIRFPVVLKPNMGGGHDEFSRAKVIRADDRELFLTAYRTAAEQIGFENVVVQELIPGGGESQFSYAALWNEGRPVAE FAARRLRQFPVDFGYTSTFVKVVEEPRVIEAARRILSSIGHCGLVEVEFKYDARDDRMRVLDVNPRPWSWFGLTAAAGAD FGAMLWSMGIGEEPVPARARPNVSWMYLLRDLVTGIKLVSMGRLSAAEYLRSFSSVRTWATFSLHDPVPALIDVPLTAWR VITRRILKIR
Sequences:
>Translated_410_residues MSDRTSAERAAPRKAPAFLKMPRGVVIVGGAHGTLALARSLGRLNIPVWLVTNDNPLPGWSRYVHRMLSWPGANDPGAVA FLLEMALRHGLSGFLLVPAADADVRLVSQSVDALSAAYRVILPDWERLKWVCEKPLLYRRAAELGVDFPPTYGFSSLEEA SQADIRFPVVLKPNMGGGHDEFSRAKVIRADDRELFLTAYRTAAEQIGFENVVVQELIPGGGESQFSYAALWNEGRPVAE FAARRLRQFPVDFGYTSTFVKVVEEPRVIEAARRILSSIGHCGLVEVEFKYDARDDRMRVLDVNPRPWSWFGLTAAAGAD FGAMLWSMGIGEEPVPARARPNVSWMYLLRDLVTGIKLVSMGRLSAAEYLRSFSSVRTWATFSLHDPVPALIDVPLTAWR VITRRILKIR >Mature_409_residues SDRTSAERAAPRKAPAFLKMPRGVVIVGGAHGTLALARSLGRLNIPVWLVTNDNPLPGWSRYVHRMLSWPGANDPGAVAF LLEMALRHGLSGFLLVPAADADVRLVSQSVDALSAAYRVILPDWERLKWVCEKPLLYRRAAELGVDFPPTYGFSSLEEAS QADIRFPVVLKPNMGGGHDEFSRAKVIRADDRELFLTAYRTAAEQIGFENVVVQELIPGGGESQFSYAALWNEGRPVAEF AARRLRQFPVDFGYTSTFVKVVEEPRVIEAARRILSSIGHCGLVEVEFKYDARDDRMRVLDVNPRPWSWFGLTAAAGADF GAMLWSMGIGEEPVPARARPNVSWMYLLRDLVTGIKLVSMGRLSAAEYLRSFSSVRTWATFSLHDPVPALIDVPLTAWRV ITRRILKIR
Specific function: Unknown
COG id: COG3919
COG function: function code R; Predicted ATP-grasp enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45618; Mature: 45487
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRTSAERAAPRKAPAFLKMPRGVVIVGGAHGTLALARSLGRLNIPVWLVTNDNPLPGW CCCCCCHHHCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHCCCCCCEEEEEECCCCCCHH SRYVHRMLSWPGANDPGAVAFLLEMALRHGLSGFLLVPAADADVRLVSQSVDALSAAYRV HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHE ILPDWERLKWVCEKPLLYRRAAELGVDFPPTYGFSSLEEASQADIRFPVVLKPNMGGGHD ECCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCC EFSRAKVIRADDRELFLTAYRTAAEQIGFENVVVQELIPGGGESQFSYAALWNEGRPVAE HHHHCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHH FAARRLRQFPVDFGYTSTFVKVVEEPRVIEAARRILSSIGHCGLVEVEFKYDARDDRMRV HHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEE LDVNPRPWSWFGLTAAAGADFGAMLWSMGIGEEPVPARARPNVSWMYLLRDLVTGIKLVS EECCCCCCEEECCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH MGRLSAAEYLRSFSSVRTWATFSLHDPVPALIDVPLTAWRVITRRILKIR CCCHHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure SDRTSAERAAPRKAPAFLKMPRGVVIVGGAHGTLALARSLGRLNIPVWLVTNDNPLPGW CCCCCHHHCCCCCCCHHHCCCCCEEEEECCCHHHHHHHHCCCCCCEEEEEECCCCCCHH SRYVHRMLSWPGANDPGAVAFLLEMALRHGLSGFLLVPAADADVRLVSQSVDALSAAYRV HHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHE ILPDWERLKWVCEKPLLYRRAAELGVDFPPTYGFSSLEEASQADIRFPVVLKPNMGGGHD ECCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCC EFSRAKVIRADDRELFLTAYRTAAEQIGFENVVVQELIPGGGESQFSYAALWNEGRPVAE HHHHCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHH FAARRLRQFPVDFGYTSTFVKVVEEPRVIEAARRILSSIGHCGLVEVEFKYDARDDRMRV HHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEE LDVNPRPWSWFGLTAAAGADFGAMLWSMGIGEEPVPARARPNVSWMYLLRDLVTGIKLVS EECCCCCCEEECCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH MGRLSAAEYLRSFSSVRTWATFSLHDPVPALIDVPLTAWRVITRRILKIR CCCHHHHHHHHHHHHHHHEEEEEECCCCCHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA