| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
Click here to switch to the map view.
The map label for this gene is fragment 2
Identifier: 109947577
GI number: 109947577
Start: 902921
End: 903118
Strand: Reverse
Name: fragment 2
Synonym: Hac_1042
Alternate gene names: NA
Gene position: 903118-902921 (Counterclockwise)
Preceding gene: 109947578
Following gene: 109947576
Centisome position: 58.12
GC content: 35.35
Gene sequence:
>198_bases GTGGTTGATTACTTAACAGAGATGCATGATAATTGCCAAAAGGCTTTAAACGACAGCGTTGGATCTTTAAAAATTGGTTT TAAAGAAAAACTCTACGATAAAGTCTTTTCTCAATTGTGCGAGATTGTCCCTAATAAGGAAAAGATTGATGAGGTAGCTT TTAAAAAAAAGCGTGCATGCTGTCTTGGATCGCATTGA
Upstream 100 bases:
>100_bases TGGGGAGGTGTTAAAAGATTTTTGGCTATGTGTTTAACGATAAGTGGTGTTATGATGAAAAGGATCCCATAAAAAAACAA CAACCATTAAAGCCGGAGCG
Downstream 100 bases:
>100_bases ATTTAAAGAGTTTGATTGCACCGACAAAATCCCTAGCGAGATCAAAGAGAAAATGGGTAATTTAAAAGGCGATGAAGCCA ATCAGTTTATAAAAAGCGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MVDYLTEMHDNCQKALNDSVGSLKIGFKEKLYDKVFSQLCEIVPNKEKIDEVAFKKKRACCLGSH
Sequences:
>Translated_65_residues MVDYLTEMHDNCQKALNDSVGSLKIGFKEKLYDKVFSQLCEIVPNKEKIDEVAFKKKRACCLGSH >Mature_65_residues MVDYLTEMHDNCQKALNDSVGSLKIGFKEKLYDKVFSQLCEIVPNKEKIDEVAFKKKRACCLGSH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7438; Mature: 7438
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 9.2 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVDYLTEMHDNCQKALNDSVGSLKIGFKEKLYDKVFSQLCEIVPNKEKIDEVAFKKKRAC CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH CLGSH HCCCC >Mature Secondary Structure MVDYLTEMHDNCQKALNDSVGSLKIGFKEKLYDKVFSQLCEIVPNKEKIDEVAFKKKRAC CCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH CLGSH HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA