Click here to switch to the map view.

The map label for this gene is dprA [H]

Identifier: 109947528

GI number: 109947528

Start: 864159

End: 864959

Strand: Reverse

Name: dprA [H]

Synonym: Hac_0987

Alternate gene names: 109947528

Gene position: 864959-864159 (Counterclockwise)

Preceding gene: 109947529

Following gene: 109947527

Centisome position: 55.66

GC content: 38.45

Gene sequence:

>801_bases
ATGAAAAGTAACTTCCAATATAGTGCACTAGAAGGTATCCCTAAAGTTTTTGACATTCTTAAAGACCCCCCTAAAAAGCT
CTACTTTATAGGCAATACCGTTCTCTTAAATGCACCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACGATCACTCTAGCTAAAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCGAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACTAA
TAACCATAAAGTGATCCAAGAAATCGCACAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCTTAGTGATCGCTTTAAGCGATGTAGTGATTATCCCTCAAGCGGATTTACAAAGCGGT
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAGACCCTTATTTGTTTTACCCCAACGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAACATTCATCATTTTATAAACACCCTTTTAAAAGATT
ATCATTTACAAGAAATGCATGAAAATAAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGTTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAACTTTTAGAATACGAGCTACTAGGCAAGATTAAGCGCATCAATCATATCGTAGTGTTAGCATG
A

Upstream 100 bases:

>100_bases
AAAATACACTAAATCTTCAGACATTCACTTTAAAACCCTAGATAGCAATCAAAGCGTGGAAACGATTGAAGTAGAGATTA
TATTGCCTAAATAGTTTAAA

Downstream 100 bases:

>100_bases
TTTTAGCATGCGATGTGGGGCTAAAACGCATTGGCATAGCCATGCTTTTAAATGGCATTATCTTACCTTTAGAAGCGATT
TTACGCCAAAATAGGAATCA

Product: DNA processing protein DprA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKSNFQYSALEGIPKVFDILKDPPKKLYFIGNTVLLNAPLKVAIIGTRRPTPYSKQHTITLAKELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDVVIIPQADLQSG
SMSSARLAQKYQRPLFVLPQRLNESDGTNELLEKGQAQGIFNIHHFINTLLKDYHLQEMHENKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Sequences:

>Translated_266_residues
MKSNFQYSALEGIPKVFDILKDPPKKLYFIGNTVLLNAPLKVAIIGTRRPTPYSKQHTITLAKELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDVVIIPQADLQSG
SMSSARLAQKYQRPLFVLPQRLNESDGTNELLEKGQAQGIFNIHHFINTLLKDYHLQEMHENKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA
>Mature_266_residues
MKSNFQYSALEGIPKVFDILKDPPKKLYFIGNTVLLNAPLKVAIIGTRRPTPYSKQHTITLAKELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDVVIIPQADLQSG
SMSSARLAQKYQRPLFVLPQRLNESDGTNELLEKGQAQGIFNIHHFINTLLKDYHLQEMHENKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=180, Percent_Identity=30, Blast_Score=79, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488
- InterPro:   IPR010994 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 29876; Mature: 29876

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNFQYSALEGIPKVFDILKDPPKKLYFIGNTVLLNAPLKVAIIGTRRPTPYSKQHTIT
CCCCCCHHHHHCCHHHHHHHCCCCCCEEEECCEEEEECCEEEEEEECCCCCCCCCCHHHH
LAKELAKNGAVIVSGGALGVDIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGL
HHHHHHHCCCEEEECCCEEEEEEECCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHCCE
ILSEYEKDFMPIKGSFLARNRLVIALSDVVIIPQADLQSGSMSSARLAQKYQRPLFVLPQ
EEECCCCCCCCCCCCEEECCEEEEEEECEEEEECCCCCCCCCHHHHHHHHHCCCEEEEHH
RLNESDGTNELLEKGQAQGIFNIHHFINTLLKDYHLQEMHENKDEFLEYCAKNPSYEEAY
HCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHH
LKFGDKLLEYELLGKIKRINHIVVLA
HHHHHHHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MKSNFQYSALEGIPKVFDILKDPPKKLYFIGNTVLLNAPLKVAIIGTRRPTPYSKQHTIT
CCCCCCHHHHHCCHHHHHHHCCCCCCEEEECCEEEEECCEEEEEEECCCCCCCCCCHHHH
LAKELAKNGAVIVSGGALGVDIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGL
HHHHHHHCCCEEEECCCEEEEEEECCCCCCCEEEECCCCEEEEEECCCHHHHHHHHHCCE
ILSEYEKDFMPIKGSFLARNRLVIALSDVVIIPQADLQSGSMSSARLAQKYQRPLFVLPQ
EEECCCCCCCCCCCCEEECCEEEEEEECEEEEECCCCCCCCCHHHHHHHHHCCCEEEEHH
RLNESDGTNELLEKGQAQGIFNIHHFINTLLKDYHLQEMHENKDEFLEYCAKNPSYEEAY
HCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHH
LKFGDKLLEYELLGKIKRINHIVVLA
HHHHHHHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]