Click here to switch to the map view.

The map label for this gene is omp12 fragment 2

Identifier: 109947491

GI number: 109947491

Start: 825081

End: 825230

Strand: Reverse

Name: omp12 fragment 2

Synonym: Hac_0945

Alternate gene names: NA

Gene position: 825230-825081 (Counterclockwise)

Preceding gene: 109947492

Following gene: 109947490

Centisome position: 53.11

GC content: 30.0

Gene sequence:

>150_bases
GTGATAAAAACAACCATATCATTTGCAAGAGATATTTATACTTTCGCTCAAAACCAAAAAACGATCCTTTCTAACGCTCA
AAGCATTTTCAACCTCTTTTTAATTCCATCCCCAAAAATGAGTTTGAATATTTACAAAAAGCTTATTTGA

Upstream 100 bases:

>100_bases
TTCAAAACATTTACAAAATGCTCACCCTTTTGCAAGAAGCACTCAAACTCTCTCAAAACAACACCGCTAATTCAAACACC
TTGCAAGCTCAAGCTACCGT

Downstream 100 bases:

>100_bases
AACAGCCCTTTTTAGGCACGACTCCCAATCCCAATGATATCCCTTTCAAAGGGAATGTCAATCTAAACGCTGAAATTAAT
GCGATCCAAAAGAATGTGAG

Product: outer membrane protein 12 fragment 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 49

Protein sequence:

>49_residues
MIKTTISFARDIYTFAQNQKTILSNAQSIFNLFLIPSPKMSLNIYKKLI

Sequences:

>Translated_49_residues
MIKTTISFARDIYTFAQNQKTILSNAQSIFNLFLIPSPKMSLNIYKKLI
>Mature_49_residues
MIKTTISFARDIYTFAQNQKTILSNAQSIFNLFLIPSPKMSLNIYKKLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5667; Mature: 5667

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTTISFARDIYTFAQNQKTILSNAQSIFNLFLIPSPKMSLNIYKKLI
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MIKTTISFARDIYTFAQNQKTILSNAQSIFNLFLIPSPKMSLNIYKKLI
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA