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The map label for this gene is omp12 fragment 4

Identifier: 109947489

GI number: 109947489

Start: 824505

End: 824639

Strand: Reverse

Name: omp12 fragment 4

Synonym: Hac_0943

Alternate gene names: NA

Gene position: 824639-824505 (Counterclockwise)

Preceding gene: 109947490

Following gene: 109947488

Centisome position: 53.07

GC content: 41.48

Gene sequence:

>135_bases
TTGGATTATGGGGTAGGGAGCGATTTATTGGTGAATTTCATCAACGATAAGGAGCTTAAAAAAGTAAGATTCCTTTTGGA
CTTTTTGGCGGTATCGCATTCGCTGGCACGACATGGCTTAATTCTCAGCATGTGA

Upstream 100 bases:

>100_bases
TTTTTGGCGAAAATAAACGATGGGGTGCTAGATATTATGGCTTTGTTGATTACAACCATGGCTTTATTAAATCCAAATTT
TTTAACTCCAACTCTGATGT

Downstream 100 bases:

>100_bases
ATCTAACGACTTTTAACAATACTTATAGTGCTAAAGTGCATAATTCCAATTTCCAGTTCTTAATCAATTTAGGTTTAAGG
ACTAACCTCGCTACCGCCAA

Product: outer membrane protein 12 fragment 4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 44; Mature: 44

Protein sequence:

>44_residues
MDYGVGSDLLVNFINDKELKKVRFLLDFLAVSHSLARHGLILSM

Sequences:

>Translated_44_residues
MDYGVGSDLLVNFINDKELKKVRFLLDFLAVSHSLARHGLILSM
>Mature_44_residues
MDYGVGSDLLVNFINDKELKKVRFLLDFLAVSHSLARHGLILSM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4977; Mature: 4977

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYGVGSDLLVNFINDKELKKVRFLLDFLAVSHSLARHGLILSM
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MDYGVGSDLLVNFINDKELKKVRFLLDFLAVSHSLARHGLILSM
CCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA