Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

Click here to switch to the map view.

The map label for this gene is fragment 4

Identifier: 109947268

GI number: 109947268

Start: 604927

End: 605133

Strand: Direct

Name: fragment 4

Synonym: Hac_0693

Alternate gene names: NA

Gene position: 604927-605133 (Clockwise)

Preceding gene: 109947267

Following gene: 109947269

Centisome position: 38.93

GC content: 30.43

Gene sequence:

>207_bases
TTGAAAACCAAAAAACAAGAAATATTAGATCTCATCAATGATGAAACCAAGTTTAAACAAGCATGTTTCCCAAACATATT
TGAACTAGAAAAATCGTTTCAAGAATTAGAAAAAGACATTAAAAAAACGCAAGAGTGCAGGGAAGAACTTGAAAAGTGGA
TTAAAATTGGCGAAGATTTTATAGAAGTTGAGCCTGAAGAGGAATAA

Upstream 100 bases:

>100_bases
TTGCCGCTTATCGGTATTGCTTTTGAAGTATGGGATTCTTGGAGAGAACAACAAAAAATAAAAGAATTTGAAAAAGCTAA
AGAAAAAATGAAATCCAATT

Downstream 100 bases:

>100_bases
GCTATAATTAAACTTGTTTTAAAATTTCAAAAACGCAAAAAAGCTTGTTAGTTAAGTTTAAAAAGCGGTGTTTTGAATCT
CTTAATAAGGAAAGGCAATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MKTKKQEILDLINDETKFKQACFPNIFELEKSFQELEKDIKKTQECREELEKWIKIGEDFIEVEPEEE

Sequences:

>Translated_68_residues
MKTKKQEILDLINDETKFKQACFPNIFELEKSFQELEKDIKKTQECREELEKWIKIGEDFIEVEPEEE
>Mature_68_residues
MKTKKQEILDLINDETKFKQACFPNIFELEKSFQELEKDIKKTQECREELEKWIKIGEDFIEVEPEEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8280; Mature: 8280

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKKQEILDLINDETKFKQACFPNIFELEKSFQELEKDIKKTQECREELEKWIKIGEDF
CCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEVEPEEE
HHCCCCCC
>Mature Secondary Structure
MKTKKQEILDLINDETKFKQACFPNIFELEKSFQELEKDIKKTQECREELEKWIKIGEDF
CCCHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEVEPEEE
HHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA