Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is fragment 3

Identifier: 109947263

GI number: 109947263

Start: 602876

End: 603052

Strand: Direct

Name: fragment 3

Synonym: Hac_0688

Alternate gene names: NA

Gene position: 602876-603052 (Clockwise)

Preceding gene: 109947262

Following gene: 109947264

Centisome position: 38.8

GC content: 27.12

Gene sequence:

>177_bases
TTGTGTAAAAACATAGAAGGGCGGTTTGAAAAAGATGTGGAACAATTCCGCAGAAGTATAGAAAAAGCTGTTAAACAATT
TGAAGATAGAATTAAAAATTCTCTAGAAAATTTAGAATACATCAATACTAATAGTGATTTTAATTTTGACATTAATATTA
ATAGTGGCACACATTAG

Upstream 100 bases:

>100_bases
CACGTGCCAAAATCATAGAATCAAACCGCTTGAAAGAGAAATTGAAAATAAGGAATTTGAAGAAATTCTTAAAAATGAAT
ACAAGCAAGGAATTGAAAAA

Downstream 100 bases:

>100_bases
TAAATTAGGCTTAGGGGCTTCAATAGGAGGTTTGCTTTTGCTTGGGGTTTGGAATCCTCTGGGTTGGATAGTGCTAGGAT
TAGGGGGTCTTTTAGGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 58; Mature: 58

Protein sequence:

>58_residues
MCKNIEGRFEKDVEQFRRSIEKAVKQFEDRIKNSLENLEYINTNSDFNFDININSGTH

Sequences:

>Translated_58_residues
MCKNIEGRFEKDVEQFRRSIEKAVKQFEDRIKNSLENLEYINTNSDFNFDININSGTH
>Mature_58_residues
MCKNIEGRFEKDVEQFRRSIEKAVKQFEDRIKNSLENLEYINTNSDFNFDININSGTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6927; Mature: 6927

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCKNIEGRFEKDVEQFRRSIEKAVKQFEDRIKNSLENLEYINTNSDFNFDININSGTH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCEEEEECCCCCC
>Mature Secondary Structure
MCKNIEGRFEKDVEQFRRSIEKAVKQFEDRIKNSLENLEYINTNSDFNFDININSGTH
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA