| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947203
Identifier: 109947203
GI number: 109947203
Start: 547433
End: 547861
Strand: Direct
Name: 109947203
Synonym: Hac_0623
Alternate gene names: NA
Gene position: 547433-547861 (Clockwise)
Preceding gene: 109947202
Following gene: 109947204
Centisome position: 35.23
GC content: 38.93
Gene sequence:
>429_bases TTGTATAAACACCTGCTTAACGATGAGTGCGGGTGTCTTTCAGCTAACAGAGAGCTTAAATTGAGCTTGTGGCAAGATTA TGGGTTTGACACAGCCATTGATATGATTGTGGATTATTATAGCGGATCTGTTGATGCTATCTTTTCTCAATACCTAATGA GCGAAGCAGAGAATGTTCAAAGAAACAAGGAATTGGAAGCGGATATTAAAAAGCTATACCCTAAAATCGGTTACCTTAAA GCCAATGGCGTTTATTTAGGGAGTAAAGAGCCTAGTTTCCTTATTTACGCTTTACAAGAGAGCGCGGATCTATTGACAAC CATTAGAGGGTTTGGATACAAACACAAACAAGATAGCGTTTTGCATTCTAGGAACGAGAGAGCGTGGTTGTATTTCACTA CCCCTTTAAAATTCGCGTTCTTTGAATAA
Upstream 100 bases:
>100_bases TTAAAAATGACCTTAAGTGGAGCGATGAATAACCCTAACTTAAAGGCGTTTGATGAGCTTACTGAAAAAGAAAAATACAG CATAACCGCTCCTTTCTAGG
Downstream 100 bases:
>100_bases AAGGGGTCAAAGGATTAAAGCCGCTAACCACACCAAATATGGACCAGAATTGAGAAATCCCTAACTCCCCCAAATTCTTA AAGAATTAATCAGAGACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MYKHLLNDECGCLSANRELKLSLWQDYGFDTAIDMIVDYYSGSVDAIFSQYLMSEAENVQRNKELEADIKKLYPKIGYLK ANGVYLGSKEPSFLIYALQESADLLTTIRGFGYKHKQDSVLHSRNERAWLYFTTPLKFAFFE
Sequences:
>Translated_142_residues MYKHLLNDECGCLSANRELKLSLWQDYGFDTAIDMIVDYYSGSVDAIFSQYLMSEAENVQRNKELEADIKKLYPKIGYLK ANGVYLGSKEPSFLIYALQESADLLTTIRGFGYKHKQDSVLHSRNERAWLYFTTPLKFAFFE >Mature_142_residues MYKHLLNDECGCLSANRELKLSLWQDYGFDTAIDMIVDYYSGSVDAIFSQYLMSEAENVQRNKELEADIKKLYPKIGYLK ANGVYLGSKEPSFLIYALQESADLLTTIRGFGYKHKQDSVLHSRNERAWLYFTTPLKFAFFE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16464; Mature: 16464
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKHLLNDECGCLSANRELKLSLWQDYGFDTAIDMIVDYYSGSVDAIFSQYLMSEAENVQ CCCCCCCCCCCEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RNKELEADIKKLYPKIGYLKANGVYLGSKEPSFLIYALQESADLLTTIRGFGYKHKQDSV HCCHHHHHHHHHCCCCCEEEECCEEECCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCH LHSRNERAWLYFTTPLKFAFFE HHCCCCCEEEEEECCEEEEECC >Mature Secondary Structure MYKHLLNDECGCLSANRELKLSLWQDYGFDTAIDMIVDYYSGSVDAIFSQYLMSEAENVQ CCCCCCCCCCCEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH RNKELEADIKKLYPKIGYLKANGVYLGSKEPSFLIYALQESADLLTTIRGFGYKHKQDSV HCCHHHHHHHHHCCCCCEEEECCEEECCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCH LHSRNERAWLYFTTPLKFAFFE HHCCCCCEEEEEECCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA