| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is 109947200
Identifier: 109947200
GI number: 109947200
Start: 546569
End: 546895
Strand: Direct
Name: 109947200
Synonym: Hac_0620
Alternate gene names: NA
Gene position: 546569-546895 (Clockwise)
Preceding gene: 109947192
Following gene: 109947201
Centisome position: 35.17
GC content: 34.86
Gene sequence:
>327_bases ATGTTTTTAATTCTGTCTTGTTTTATCTTGTTTGGTTTATTTTTTATGGCTTATTTTTGTGGGACAGCTGAAAAGTTTGC TAAAATAAGAGCTAGTAACCCTAATTTAAAAAGAACGATAGCTTTCACAGATGAAGAAAGGGCTGACTTGGGCGTTGCCG GTCTTTTTAGGGTTTATAAGTATGTGATAGGGGGTCAATACGGAATTATTTCGACCTTTAGGAGTAACTATGATTTAGAA ACGAATATGAAGCGGACTAAACAGATCAAAGCAATATTGAAAGCCTTATACCCTAAAGTGGGCTTTATTACCATTCAGGG TTCTTAA
Upstream 100 bases:
>100_bases TACCCAGCTAACCATTCCGAACCTGGAAGTCAAGCTCTTCATCGCTGATGATACTGCTCTTTTCAAGAGTGGGAATGTAG GTCGGTGCAGGGATAGGGAA
Downstream 100 bases:
>100_bases TAAGAAAAAGCTAATGATATTCCACAGAACGAAGTTTCCTTTTTTGTCTATACACTCAAAGACCCTCACTGTCTCTTAAA AAAAGAATTTATTGAACTAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MFLILSCFILFGLFFMAYFCGTAEKFAKIRASNPNLKRTIAFTDEERADLGVAGLFRVYKYVIGGQYGIISTFRSNYDLE TNMKRTKQIKAILKALYPKVGFITIQGS
Sequences:
>Translated_108_residues MFLILSCFILFGLFFMAYFCGTAEKFAKIRASNPNLKRTIAFTDEERADLGVAGLFRVYKYVIGGQYGIISTFRSNYDLE TNMKRTKQIKAILKALYPKVGFITIQGS >Mature_108_residues MFLILSCFILFGLFFMAYFCGTAEKFAKIRASNPNLKRTIAFTDEERADLGVAGLFRVYKYVIGGQYGIISTFRSNYDLE TNMKRTKQIKAILKALYPKVGFITIQGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12273; Mature: 12273
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLILSCFILFGLFFMAYFCGTAEKFAKIRASNPNLKRTIAFTDEERADLGVAGLFRVYK CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHCCHHHHHHHHH YVIGGQYGIISTFRSNYDLETNMKRTKQIKAILKALYPKVGFITIQGS HHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure MFLILSCFILFGLFFMAYFCGTAEKFAKIRASNPNLKRTIAFTDEERADLGVAGLFRVYK CHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEECCCCCHHCCHHHHHHHHH YVIGGQYGIISTFRSNYDLETNMKRTKQIKAILKALYPKVGFITIQGS HHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA