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The map label for this gene is ynaI [C]

Identifier: 109947185

GI number: 109947185

Start: 528705

End: 530573

Strand: Direct

Name: ynaI [C]

Synonym: Hac_0603

Alternate gene names: 109947185

Gene position: 528705-530573 (Clockwise)

Preceding gene: 109947184

Following gene: 109947187

Centisome position: 34.02

GC content: 36.49

Gene sequence:

>1869_bases
ATGCGTTTGTTATGGTGTTGGGTGTTGGCATTATCGCTCTTTTTGAATCCTTTGAGGACCGAAGAGCAAGAGACAGATGC
GTTGGATTTGTTTTTGATTTTCAATCAAATCAACCAGCTCAATCAGGTCATTGAGACCTATAAAAAAGACCCTGAAAGAA
GCGCTGAAATCTCTTTGTATAACGATCAAAAAAATGATTTGATTAAAAGCCTAACTTCTAAGGTCCTGAATGAAAGGGAT
AAGATTGGGATTGATATAAACCAAAATTTAAAAGAGCAAGAGAAAATCAAAAAACATTTAGCTAAAAGCATTAAGGGTCA
TGATTTCTACACTTTCATGAAAGACAGATTGTCTTTAGATATTTTGTTAGTGGATGAGATTTTATATCGTTTTATCGATA
AGATCAGGAGCAGTATTGATATTTTTAGCGAACAAAAAGATGTGGAAAATATCAGTAACGCTTTCCTTTTGCGTCTAGGG
CAATTCAAACCCTACACTTTCCCTAAAAATTTAGACAATATCAAAATGCATGAATTGCAAGAAATGTATAGCGATTATGA
ATTGCGTTTGAACACTTATACTGAAGTCTTGCGTTATATCAAAAACCACCCTAAAGAAGTGCTTCCTAAAAACTTGATCA
TGGAAGTGAATATGGATTTTGTGTTAAACAAAATCAGTAAGATCTTGCCTTTCACCACCCATAGTTTGCAAGTGAGTAAA
ATCGTGCTTTCTTTAACGATTTTAGTCGTATTGTTAGCTTTAAGGAAGTTAATCACTTTTCTTCTAGGCAAAATATTGGA
TTTTCTTTTTGAATTCATGCGGCGCAATAAAAAAATGCATATCAATGTCCAAAGCAGCATTGTTTTACCGGTTTCTGTCT
TTTTAGCGATATTCAGTTGCGATGTGGCTTTAGATATTTTCTATTACCCTAACGCATCGCCCCATAAATTTTCTATGTGG
GTGGGCGCGGTGTATATCATGCTTTTAGCATGGCTAGTGATCGTGCTTTTTAAGGGGTATGGGGCGGCGTTAGTTACCAA
TATCGCTACCAAAAGCACGCACAATTTTAGAAAAGAAGTGATCAACTTGATTTTAAAAATCGTGTATTTTTTGATTTTTA
TTGTCGCGCTTTTAGGGGTTTTGAAACAATTAGGGTTTAATGTTTCAGCCATCATCGCTTCTTTAGGGATTGGTGGGTTA
GCAGTGGCTTTAGCGGTTAAAGATGTGTTGGCGAATTTTTTTGCTTCTGTCATTTTATTATTAGACAATTCGTTTTCTCA
AGGGGATTGGATTGTGTGCGGTGAAGTGGAGGGCACGGTGGTGGAAATGGGGTTAAGACGCACCACGATCAGAGCTTTTG
ATAACGCTCTTTTGTCCGTGCCTAACTCAGAATTAGCCGGAAAGCCCATCAGAAACTGGAGCCGTCGTAAAGTGGGAAGG
CGCATTAAAATGGAAATAGGCTTGACTTATAATTCTAGTCAAAGTGCTTTACAGCTTTGCGTGAAAGACATTAGAGAAAT
GTTAGAAAACCACCCTAAAATCGCTAATGGATCCGATAGCGCTTTGCAAAATGTGAATGATTACCGCTACATGTTTAAAA
AAGATATTGTCTCTATTGATGATTTTTTAGGGTATAAAAGCAATTTGTTTGTCTTTTTAGATCAATTTGCAGATAGCTCT
ATCAATATTTTAGTGTATTGCTTTTCTAAAACGGTGGTTTGGGGGGAGTGGCTAGAAGTCAAAGAAGATGTGATGCTAAA
AATCATGGAAATTGTAGAAAAGCATCATTTGAGTTTTGCTTTCCCATCGCAGAGTTTGTATGTGGAGAGTTTGCCAAAAG
TTAGCCTGAAAGAAAAGGCTAAAATCTAA

Upstream 100 bases:

>100_bases
ACCGCCTTTAGTAAGCGAAGCGTTTCTAAAATTTGGTATAATCGCTAGGTATTTGCTAAAAATTATAGAAAAAAATTTTA
TTGTTTTAATGGGGTTTTAT

Downstream 100 bases:

>100_bases
AATTATTGATAAATGTATTCTTTGGTTAAAGGGAATGTGTTATCCACGCTGTTAGTTAAAAGCAATTGGAATAAATCTGC
ACTCCCTACCCTAAAAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 622; Mature: 622

Protein sequence:

>622_residues
MRLLWCWVLALSLFLNPLRTEEQETDALDLFLIFNQINQLNQVIETYKKDPERSAEISLYNDQKNDLIKSLTSKVLNERD
KIGIDINQNLKEQEKIKKHLAKSIKGHDFYTFMKDRLSLDILLVDEILYRFIDKIRSSIDIFSEQKDVENISNAFLLRLG
QFKPYTFPKNLDNIKMHELQEMYSDYELRLNTYTEVLRYIKNHPKEVLPKNLIMEVNMDFVLNKISKILPFTTHSLQVSK
IVLSLTILVVLLALRKLITFLLGKILDFLFEFMRRNKKMHINVQSSIVLPVSVFLAIFSCDVALDIFYYPNASPHKFSMW
VGAVYIMLLAWLVIVLFKGYGAALVTNIATKSTHNFRKEVINLILKIVYFLIFIVALLGVLKQLGFNVSAIIASLGIGGL
AVALAVKDVLANFFASVILLLDNSFSQGDWIVCGEVEGTVVEMGLRRTTIRAFDNALLSVPNSELAGKPIRNWSRRKVGR
RIKMEIGLTYNSSQSALQLCVKDIREMLENHPKIANGSDSALQNVNDYRYMFKKDIVSIDDFLGYKSNLFVFLDQFADSS
INILVYCFSKTVVWGEWLEVKEDVMLKIMEIVEKHHLSFAFPSQSLYVESLPKVSLKEKAKI

Sequences:

>Translated_622_residues
MRLLWCWVLALSLFLNPLRTEEQETDALDLFLIFNQINQLNQVIETYKKDPERSAEISLYNDQKNDLIKSLTSKVLNERD
KIGIDINQNLKEQEKIKKHLAKSIKGHDFYTFMKDRLSLDILLVDEILYRFIDKIRSSIDIFSEQKDVENISNAFLLRLG
QFKPYTFPKNLDNIKMHELQEMYSDYELRLNTYTEVLRYIKNHPKEVLPKNLIMEVNMDFVLNKISKILPFTTHSLQVSK
IVLSLTILVVLLALRKLITFLLGKILDFLFEFMRRNKKMHINVQSSIVLPVSVFLAIFSCDVALDIFYYPNASPHKFSMW
VGAVYIMLLAWLVIVLFKGYGAALVTNIATKSTHNFRKEVINLILKIVYFLIFIVALLGVLKQLGFNVSAIIASLGIGGL
AVALAVKDVLANFFASVILLLDNSFSQGDWIVCGEVEGTVVEMGLRRTTIRAFDNALLSVPNSELAGKPIRNWSRRKVGR
RIKMEIGLTYNSSQSALQLCVKDIREMLENHPKIANGSDSALQNVNDYRYMFKKDIVSIDDFLGYKSNLFVFLDQFADSS
INILVYCFSKTVVWGEWLEVKEDVMLKIMEIVEKHHLSFAFPSQSLYVESLPKVSLKEKAKI
>Mature_622_residues
MRLLWCWVLALSLFLNPLRTEEQETDALDLFLIFNQINQLNQVIETYKKDPERSAEISLYNDQKNDLIKSLTSKVLNERD
KIGIDINQNLKEQEKIKKHLAKSIKGHDFYTFMKDRLSLDILLVDEILYRFIDKIRSSIDIFSEQKDVENISNAFLLRLG
QFKPYTFPKNLDNIKMHELQEMYSDYELRLNTYTEVLRYIKNHPKEVLPKNLIMEVNMDFVLNKISKILPFTTHSLQVSK
IVLSLTILVVLLALRKLITFLLGKILDFLFEFMRRNKKMHINVQSSIVLPVSVFLAIFSCDVALDIFYYPNASPHKFSMW
VGAVYIMLLAWLVIVLFKGYGAALVTNIATKSTHNFRKEVINLILKIVYFLIFIVALLGVLKQLGFNVSAIIASLGIGGL
AVALAVKDVLANFFASVILLLDNSFSQGDWIVCGEVEGTVVEMGLRRTTIRAFDNALLSVPNSELAGKPIRNWSRRKVGR
RIKMEIGLTYNSSQSALQLCVKDIREMLENHPKIANGSDSALQNVNDYRYMFKKDIVSIDDFLGYKSNLFVFLDQFADSS
INILVYCFSKTVVWGEWLEVKEDVMLKIMEIVEKHHLSFAFPSQSLYVESLPKVSLKEKAKI

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=248, Percent_Identity=40.3225806451613, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI1789291, Length=243, Percent_Identity=26.7489711934156, Blast_Score=85, Evalue=2e-17,
Organism=Escherichia coli, GI1786670, Length=195, Percent_Identity=25.1282051282051, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786791, Length=249, Percent_Identity=22.8915662650602, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 71552; Mature: 71552

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS01246 UPF0003

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLWCWVLALSLFLNPLRTEEQETDALDLFLIFNQINQLNQVIETYKKDPERSAEISLY
CHHHHHHHHHHHHHHCHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
NDQKNDLIKSLTSKVLNERDKIGIDINQNLKEQEKIKKHLAKSIKGHDFYTFMKDRLSLD
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCH
ILLVDEILYRFIDKIRSSIDIFSEQKDVENISNAFLLRLGQFKPYTFPKNLDNIKMHELQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
EMYSDYELRLNTYTEVLRYIKNHPKEVLPKNLIMEVNMDFVLNKISKILPFTTHSLQVSK
HHHCCHHEEHHHHHHHHHHHHCCCHHHCCCHHEECCCHHHHHHHHHHHCCCCCCHHHHHH
IVLSLTILVVLLALRKLITFLLGKILDFLFEFMRRNKKMHINVQSSIVLPVSVFLAIFSC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
DVALDIFYYPNASPHKFSMWVGAVYIMLLAWLVIVLFKGYGAALVTNIATKSTHNFRKEV
HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
INLILKIVYFLIFIVALLGVLKQLGFNVSAIIASLGIGGLAVALAVKDVLANFFASVILL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LDNSFSQGDWIVCGEVEGTVVEMGLRRTTIRAFDNALLSVPNSELAGKPIRNWSRRKVGR
HCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
RIKMEIGLTYNSSQSALQLCVKDIREMLENHPKIANGSDSALQNVNDYRYMFKKDIVSID
EEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DFLGYKSNLFVFLDQFADSSINILVYCFSKTVVWGEWLEVKEDVMLKIMEIVEKHHLSFA
HHHCCCCCHHEEEHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
FPSQSLYVESLPKVSLKEKAKI
CCCCCHHHHHCCCCCCHHCCCC
>Mature Secondary Structure
MRLLWCWVLALSLFLNPLRTEEQETDALDLFLIFNQINQLNQVIETYKKDPERSAEISLY
CHHHHHHHHHHHHHHCHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEE
NDQKNDLIKSLTSKVLNERDKIGIDINQNLKEQEKIKKHLAKSIKGHDFYTFMKDRLSLD
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCH
ILLVDEILYRFIDKIRSSIDIFSEQKDVENISNAFLLRLGQFKPYTFPKNLDNIKMHELQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
EMYSDYELRLNTYTEVLRYIKNHPKEVLPKNLIMEVNMDFVLNKISKILPFTTHSLQVSK
HHHCCHHEEHHHHHHHHHHHHCCCHHHCCCHHEECCCHHHHHHHHHHHCCCCCCHHHHHH
IVLSLTILVVLLALRKLITFLLGKILDFLFEFMRRNKKMHINVQSSIVLPVSVFLAIFSC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH
DVALDIFYYPNASPHKFSMWVGAVYIMLLAWLVIVLFKGYGAALVTNIATKSTHNFRKEV
HHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
INLILKIVYFLIFIVALLGVLKQLGFNVSAIIASLGIGGLAVALAVKDVLANFFASVILL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
LDNSFSQGDWIVCGEVEGTVVEMGLRRTTIRAFDNALLSVPNSELAGKPIRNWSRRKVGR
HCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
RIKMEIGLTYNSSQSALQLCVKDIREMLENHPKIANGSDSALQNVNDYRYMFKKDIVSID
EEEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
DFLGYKSNLFVFLDQFADSSINILVYCFSKTVVWGEWLEVKEDVMLKIMEIVEKHHLSFA
HHHCCCCCHHEEEHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
FPSQSLYVESLPKVSLKEKAKI
CCCCCHHHHHCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]