| Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
|---|---|
| Accession | NC_008229 |
| Length | 1,553,927 |
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The map label for this gene is flgK [H]
Identifier: 109947182
GI number: 109947182
Start: 523324
End: 525144
Strand: Direct
Name: flgK [H]
Synonym: Hac_0597
Alternate gene names: 109947182
Gene position: 523324-525144 (Clockwise)
Preceding gene: 109947181
Following gene: 109947183
Centisome position: 33.68
GC content: 37.84
Gene sequence:
>1821_bases ATGGGCGGAATCTTATCTTCACTCAACACTTCTTACACCGGCTTACAAGCCCACCAAAGCATGGTGGATGTTACTGGGAA TAATATTTCTAACGCCAGCGATGAATTTTATAGCCGTCAGCGCGTGATCGCAAAGCCTCAAGAGGCTTATATGTATGGCA CTAAAAATGTCAATATGGGCGTGGACATAGAAGCTATTGAAAGGGTGCATGATGAGTTTGTTTTTTCTCGCTACACGAAA GCTAATTACGAAAACACTTATTATGATACAGAATTTTCGCATTTAAAAGAAGCGAGCGCGTATTTTCCGGATATTGATGA AGCGAGCCTTTTTACGGATTTGCAAGATTATTTTAACTCATGGAAAGAATTGTCTAAGAATGCCAAAGACTCCGCTCAAA AACAAGCTCTCGCTCAAAAAACAGAAGCCTTAACGCACAATATTAAAGACACTAGAGAAAGATTAACAACCTTACAGCAT AAGGCGAGCGAAGAATTAAAAAGCGTTATTAAAGAAGTGAATAGCTTGGGTTCTCAAATCGCTGAGATTAACAAACGCAT CAAAGAAGTGGAAAATAACAAGAGTTTAAAGCATGCCAATGAGTTAAGAGACAAGCGAGATGAATTGGAATTCCATTTGC GAGAACTTTTAGGGGGGAATGTTTTTAAAAGTAGTATTAAAACCCATTCGCTCATAGATAAAGACTCAGCGGACTTTGAT GAAAGCTATAATCTTAATATTGGGCATGGGTTCAATATCATTGATGGCTCTATTTTCCACCCTTTAGTGATTAAAGAGTC CGAAAATAAAGGAGGTTTGAATCAAGTTTATTTCCAAAGCGATGATTTTAAAGTAACTAATATTACTGATAAACTCAATC AAGGGAAAGTGGGGGCGTTATTGAATGTGTATAATGATGGCTCTAACGGAACTTTAAAAGGCAAGTTGCAAGATTATATT GATTTATTGGATTCTTTTGCTAGGGGCTTGATAGAATCCACTAATGCGATTTACGCTCAAAGCGCGAGTCATAATATTGA AGGCGAGCCTGTGGAGTTTAACGATAATGAAGCCTTTAAAGACACGAACTACAATATCAAAAACGGCTCGTTTGACTTGA TCGCTTACAACACCGATGGTAAAGAAATTGCTAGGAAAACCATTGCTATCACGCCCATTACAACCATGAACGATATTATC CAAGCTATTAACGCTAATACTGATGACAATAAAGACAACAACGCCGAAAACGATTTTGATGATTATTTCACAGCGAGTTT TAACAATGAGACTAAAAAGTTTATTATCCAACCTAAAAACGCTTCACAAGGGTTGTTTGTCTCTATGAAAGATAACGGCA CGAATTTTATGGGGGCGTTAAAACTCAACCCTTTTTTTCAAGGCGATGACGCTTCCACTATTAGCTTGAATAAAGAATAC AAAAAAGAGCCGACCACCATTCGCCCATGGCTTGCCCCCATTAATGGGAATTTTGATGTGGCTAACATGATGCAACAATT GCAATACGATAGCGTGGATTTCTATAACGATAAGTTTGACATCAAACAAATGAAGATCAGCGAGTTTTATCAATTCTTAA CCAGTAAAATCAACACGGACGCTGAAAAATCTGGGCGTATTTTGGACACTAAAAAGAGCATGCTAGAGACTATTAAAAAA GAGCAACTCTCCATTTCGCAAGTGAGCGTGGATGAAGAAATGGTGAATTTAATCAAGTTTCAAAGCGGCTATGCGGCTAA CGCTAAAGTCATCACTGCTATTGATAGGATGATAGACACTTTGTTGGGTATTAAGCAATAA
Upstream 100 bases:
>100_bases TTTTATTCTTCACTCATTCAGCAAATCATTCCCCATGACACTTGCGATTATAAAGGTTCTAGGCATGTGGGAAGCCATTT TTTAAGAGTGCAGGCATAAA
Downstream 100 bases:
>100_bases TATTTTTTATAAAATTTAAAAAATGCTTTTTAGCATTTTTTACAACAAATACAAAAGAGCTTGACGCTAGTCAAGTGATA ATTTCTTTAAAAAAGCGGTC
Product: flagellar hook-associated protein FlgK
Products: NA
Alternate protein names: HAP1 [H]
Number of amino acids: Translated: 606; Mature: 605
Protein sequence:
>606_residues MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQEAYMYGTKNVNMGVDIEAIERVHDEFVFSRYTK ANYENTYYDTEFSHLKEASAYFPDIDEASLFTDLQDYFNSWKELSKNAKDSAQKQALAQKTEALTHNIKDTRERLTTLQH KASEELKSVIKEVNSLGSQIAEINKRIKEVENNKSLKHANELRDKRDELEFHLRELLGGNVFKSSIKTHSLIDKDSADFD ESYNLNIGHGFNIIDGSIFHPLVIKESENKGGLNQVYFQSDDFKVTNITDKLNQGKVGALLNVYNDGSNGTLKGKLQDYI DLLDSFARGLIESTNAIYAQSASHNIEGEPVEFNDNEAFKDTNYNIKNGSFDLIAYNTDGKEIARKTIAITPITTMNDII QAINANTDDNKDNNAENDFDDYFTASFNNETKKFIIQPKNASQGLFVSMKDNGTNFMGALKLNPFFQGDDASTISLNKEY KKEPTTIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTSKINTDAEKSGRILDTKKSMLETIKK EQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ
Sequences:
>Translated_606_residues MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQEAYMYGTKNVNMGVDIEAIERVHDEFVFSRYTK ANYENTYYDTEFSHLKEASAYFPDIDEASLFTDLQDYFNSWKELSKNAKDSAQKQALAQKTEALTHNIKDTRERLTTLQH KASEELKSVIKEVNSLGSQIAEINKRIKEVENNKSLKHANELRDKRDELEFHLRELLGGNVFKSSIKTHSLIDKDSADFD ESYNLNIGHGFNIIDGSIFHPLVIKESENKGGLNQVYFQSDDFKVTNITDKLNQGKVGALLNVYNDGSNGTLKGKLQDYI DLLDSFARGLIESTNAIYAQSASHNIEGEPVEFNDNEAFKDTNYNIKNGSFDLIAYNTDGKEIARKTIAITPITTMNDII QAINANTDDNKDNNAENDFDDYFTASFNNETKKFIIQPKNASQGLFVSMKDNGTNFMGALKLNPFFQGDDASTISLNKEY KKEPTTIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTSKINTDAEKSGRILDTKKSMLETIKK EQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ >Mature_605_residues GGILSSLNTSYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQEAYMYGTKNVNMGVDIEAIERVHDEFVFSRYTKA NYENTYYDTEFSHLKEASAYFPDIDEASLFTDLQDYFNSWKELSKNAKDSAQKQALAQKTEALTHNIKDTRERLTTLQHK ASEELKSVIKEVNSLGSQIAEINKRIKEVENNKSLKHANELRDKRDELEFHLRELLGGNVFKSSIKTHSLIDKDSADFDE SYNLNIGHGFNIIDGSIFHPLVIKESENKGGLNQVYFQSDDFKVTNITDKLNQGKVGALLNVYNDGSNGTLKGKLQDYID LLDSFARGLIESTNAIYAQSASHNIEGEPVEFNDNEAFKDTNYNIKNGSFDLIAYNTDGKEIARKTIAITPITTMNDIIQ AINANTDDNKDNNAENDFDDYFTASFNNETKKFIIQPKNASQGLFVSMKDNGTNFMGALKLNPFFQGDDASTISLNKEYK KEPTTIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTSKINTDAEKSGRILDTKKSMLETIKKE QLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ
Specific function: Unknown
COG id: COG1256
COG function: function code N; Flagellar hook-associated protein
Gene ontology:
Cell location: Secreted. Bacterial flagellum (By similarity) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flagella basal body rod proteins family [H]
Homologues:
Organism=Escherichia coli, GI1787323, Length=299, Percent_Identity=25.0836120401338, Blast_Score=100, Evalue=4e-22,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010930 - InterPro: IPR001444 - InterPro: IPR019776 - InterPro: IPR002371 [H]
Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]
EC number: NA
Molecular weight: Translated: 68505; Mature: 68374
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQEAYMYGTKNVNMG CCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHEEEECCCCCCC VDIEAIERVHDEFVFSRYTKANYENTYYDTEFSHLKEASAYFPDIDEASLFTDLQDYFNS CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH WKELSKNAKDSAQKQALAQKTEALTHNIKDTRERLTTLQHKASEELKSVIKEVNSLGSQI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEINKRIKEVENNKSLKHANELRDKRDELEFHLRELLGGNVFKSSIKTHSLIDKDSADFD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC ESYNLNIGHGFNIIDGSIFHPLVIKESENKGGLNQVYFQSDDFKVTNITDKLNQGKVGAL CCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEHHHHCCCCCCEEE LNVYNDGSNGTLKGKLQDYIDLLDSFARGLIESTNAIYAQSASHNIEGEPVEFNDNEAFK EEEEECCCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCCCC DTNYNIKNGSFDLIAYNTDGKEIARKTIAITPITTMNDIIQAINANTDDNKDNNAENDFD CCCCEECCCCEEEEEECCCHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCH DYFTASFNNETKKFIIQPKNASQGLFVSMKDNGTNFMGALKLNPFFQGDDASTISLNKEY HHEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCEECCCCCCEEEECHHH KKEPTTIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTSKINTD CCCCCEECCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC AEKSGRILDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDT HHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LLGIKQ HHCCCC >Mature Secondary Structure GGILSSLNTSYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQEAYMYGTKNVNMG CCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHEEEECCCCCCC VDIEAIERVHDEFVFSRYTKANYENTYYDTEFSHLKEASAYFPDIDEASLFTDLQDYFNS CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH WKELSKNAKDSAQKQALAQKTEALTHNIKDTRERLTTLQHKASEELKSVIKEVNSLGSQI HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AEINKRIKEVENNKSLKHANELRDKRDELEFHLRELLGGNVFKSSIKTHSLIDKDSADFD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC ESYNLNIGHGFNIIDGSIFHPLVIKESENKGGLNQVYFQSDDFKVTNITDKLNQGKVGAL CCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEHHHHCCCCCCEEE LNVYNDGSNGTLKGKLQDYIDLLDSFARGLIESTNAIYAQSASHNIEGEPVEFNDNEAFK EEEEECCCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCCCC DTNYNIKNGSFDLIAYNTDGKEIARKTIAITPITTMNDIIQAINANTDDNKDNNAENDFD CCCCEECCCCEEEEEECCCHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCH DYFTASFNNETKKFIIQPKNASQGLFVSMKDNGTNFMGALKLNPFFQGDDASTISLNKEY HHEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCEECCCCCCEEEECHHH KKEPTTIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTSKINTD CCCCCEECCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC AEKSGRILDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDT HHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LLGIKQ HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 8045879 [H]