Definition Helicobacter acinonychis str. Sheeba chromosome, complete genome.
Accession NC_008229
Length 1,553,927

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The map label for this gene is flgK [H]

Identifier: 109947182

GI number: 109947182

Start: 523324

End: 525144

Strand: Direct

Name: flgK [H]

Synonym: Hac_0597

Alternate gene names: 109947182

Gene position: 523324-525144 (Clockwise)

Preceding gene: 109947181

Following gene: 109947183

Centisome position: 33.68

GC content: 37.84

Gene sequence:

>1821_bases
ATGGGCGGAATCTTATCTTCACTCAACACTTCTTACACCGGCTTACAAGCCCACCAAAGCATGGTGGATGTTACTGGGAA
TAATATTTCTAACGCCAGCGATGAATTTTATAGCCGTCAGCGCGTGATCGCAAAGCCTCAAGAGGCTTATATGTATGGCA
CTAAAAATGTCAATATGGGCGTGGACATAGAAGCTATTGAAAGGGTGCATGATGAGTTTGTTTTTTCTCGCTACACGAAA
GCTAATTACGAAAACACTTATTATGATACAGAATTTTCGCATTTAAAAGAAGCGAGCGCGTATTTTCCGGATATTGATGA
AGCGAGCCTTTTTACGGATTTGCAAGATTATTTTAACTCATGGAAAGAATTGTCTAAGAATGCCAAAGACTCCGCTCAAA
AACAAGCTCTCGCTCAAAAAACAGAAGCCTTAACGCACAATATTAAAGACACTAGAGAAAGATTAACAACCTTACAGCAT
AAGGCGAGCGAAGAATTAAAAAGCGTTATTAAAGAAGTGAATAGCTTGGGTTCTCAAATCGCTGAGATTAACAAACGCAT
CAAAGAAGTGGAAAATAACAAGAGTTTAAAGCATGCCAATGAGTTAAGAGACAAGCGAGATGAATTGGAATTCCATTTGC
GAGAACTTTTAGGGGGGAATGTTTTTAAAAGTAGTATTAAAACCCATTCGCTCATAGATAAAGACTCAGCGGACTTTGAT
GAAAGCTATAATCTTAATATTGGGCATGGGTTCAATATCATTGATGGCTCTATTTTCCACCCTTTAGTGATTAAAGAGTC
CGAAAATAAAGGAGGTTTGAATCAAGTTTATTTCCAAAGCGATGATTTTAAAGTAACTAATATTACTGATAAACTCAATC
AAGGGAAAGTGGGGGCGTTATTGAATGTGTATAATGATGGCTCTAACGGAACTTTAAAAGGCAAGTTGCAAGATTATATT
GATTTATTGGATTCTTTTGCTAGGGGCTTGATAGAATCCACTAATGCGATTTACGCTCAAAGCGCGAGTCATAATATTGA
AGGCGAGCCTGTGGAGTTTAACGATAATGAAGCCTTTAAAGACACGAACTACAATATCAAAAACGGCTCGTTTGACTTGA
TCGCTTACAACACCGATGGTAAAGAAATTGCTAGGAAAACCATTGCTATCACGCCCATTACAACCATGAACGATATTATC
CAAGCTATTAACGCTAATACTGATGACAATAAAGACAACAACGCCGAAAACGATTTTGATGATTATTTCACAGCGAGTTT
TAACAATGAGACTAAAAAGTTTATTATCCAACCTAAAAACGCTTCACAAGGGTTGTTTGTCTCTATGAAAGATAACGGCA
CGAATTTTATGGGGGCGTTAAAACTCAACCCTTTTTTTCAAGGCGATGACGCTTCCACTATTAGCTTGAATAAAGAATAC
AAAAAAGAGCCGACCACCATTCGCCCATGGCTTGCCCCCATTAATGGGAATTTTGATGTGGCTAACATGATGCAACAATT
GCAATACGATAGCGTGGATTTCTATAACGATAAGTTTGACATCAAACAAATGAAGATCAGCGAGTTTTATCAATTCTTAA
CCAGTAAAATCAACACGGACGCTGAAAAATCTGGGCGTATTTTGGACACTAAAAAGAGCATGCTAGAGACTATTAAAAAA
GAGCAACTCTCCATTTCGCAAGTGAGCGTGGATGAAGAAATGGTGAATTTAATCAAGTTTCAAAGCGGCTATGCGGCTAA
CGCTAAAGTCATCACTGCTATTGATAGGATGATAGACACTTTGTTGGGTATTAAGCAATAA

Upstream 100 bases:

>100_bases
TTTTATTCTTCACTCATTCAGCAAATCATTCCCCATGACACTTGCGATTATAAAGGTTCTAGGCATGTGGGAAGCCATTT
TTTAAGAGTGCAGGCATAAA

Downstream 100 bases:

>100_bases
TATTTTTTATAAAATTTAAAAAATGCTTTTTAGCATTTTTTACAACAAATACAAAAGAGCTTGACGCTAGTCAAGTGATA
ATTTCTTTAAAAAAGCGGTC

Product: flagellar hook-associated protein FlgK

Products: NA

Alternate protein names: HAP1 [H]

Number of amino acids: Translated: 606; Mature: 605

Protein sequence:

>606_residues
MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQEAYMYGTKNVNMGVDIEAIERVHDEFVFSRYTK
ANYENTYYDTEFSHLKEASAYFPDIDEASLFTDLQDYFNSWKELSKNAKDSAQKQALAQKTEALTHNIKDTRERLTTLQH
KASEELKSVIKEVNSLGSQIAEINKRIKEVENNKSLKHANELRDKRDELEFHLRELLGGNVFKSSIKTHSLIDKDSADFD
ESYNLNIGHGFNIIDGSIFHPLVIKESENKGGLNQVYFQSDDFKVTNITDKLNQGKVGALLNVYNDGSNGTLKGKLQDYI
DLLDSFARGLIESTNAIYAQSASHNIEGEPVEFNDNEAFKDTNYNIKNGSFDLIAYNTDGKEIARKTIAITPITTMNDII
QAINANTDDNKDNNAENDFDDYFTASFNNETKKFIIQPKNASQGLFVSMKDNGTNFMGALKLNPFFQGDDASTISLNKEY
KKEPTTIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTSKINTDAEKSGRILDTKKSMLETIKK
EQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ

Sequences:

>Translated_606_residues
MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQEAYMYGTKNVNMGVDIEAIERVHDEFVFSRYTK
ANYENTYYDTEFSHLKEASAYFPDIDEASLFTDLQDYFNSWKELSKNAKDSAQKQALAQKTEALTHNIKDTRERLTTLQH
KASEELKSVIKEVNSLGSQIAEINKRIKEVENNKSLKHANELRDKRDELEFHLRELLGGNVFKSSIKTHSLIDKDSADFD
ESYNLNIGHGFNIIDGSIFHPLVIKESENKGGLNQVYFQSDDFKVTNITDKLNQGKVGALLNVYNDGSNGTLKGKLQDYI
DLLDSFARGLIESTNAIYAQSASHNIEGEPVEFNDNEAFKDTNYNIKNGSFDLIAYNTDGKEIARKTIAITPITTMNDII
QAINANTDDNKDNNAENDFDDYFTASFNNETKKFIIQPKNASQGLFVSMKDNGTNFMGALKLNPFFQGDDASTISLNKEY
KKEPTTIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTSKINTDAEKSGRILDTKKSMLETIKK
EQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ
>Mature_605_residues
GGILSSLNTSYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQEAYMYGTKNVNMGVDIEAIERVHDEFVFSRYTKA
NYENTYYDTEFSHLKEASAYFPDIDEASLFTDLQDYFNSWKELSKNAKDSAQKQALAQKTEALTHNIKDTRERLTTLQHK
ASEELKSVIKEVNSLGSQIAEINKRIKEVENNKSLKHANELRDKRDELEFHLRELLGGNVFKSSIKTHSLIDKDSADFDE
SYNLNIGHGFNIIDGSIFHPLVIKESENKGGLNQVYFQSDDFKVTNITDKLNQGKVGALLNVYNDGSNGTLKGKLQDYID
LLDSFARGLIESTNAIYAQSASHNIEGEPVEFNDNEAFKDTNYNIKNGSFDLIAYNTDGKEIARKTIAITPITTMNDIIQ
AINANTDDNKDNNAENDFDDYFTASFNNETKKFIIQPKNASQGLFVSMKDNGTNFMGALKLNPFFQGDDASTISLNKEYK
KEPTTIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTSKINTDAEKSGRILDTKKSMLETIKKE
QLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDTLLGIKQ

Specific function: Unknown

COG id: COG1256

COG function: function code N; Flagellar hook-associated protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787323, Length=299, Percent_Identity=25.0836120401338, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR002371 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 68505; Mature: 68374

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGILSSLNTSYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQEAYMYGTKNVNMG
CCCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHEEEECCCCCCC
VDIEAIERVHDEFVFSRYTKANYENTYYDTEFSHLKEASAYFPDIDEASLFTDLQDYFNS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
WKELSKNAKDSAQKQALAQKTEALTHNIKDTRERLTTLQHKASEELKSVIKEVNSLGSQI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEINKRIKEVENNKSLKHANELRDKRDELEFHLRELLGGNVFKSSIKTHSLIDKDSADFD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
ESYNLNIGHGFNIIDGSIFHPLVIKESENKGGLNQVYFQSDDFKVTNITDKLNQGKVGAL
CCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEHHHHCCCCCCEEE
LNVYNDGSNGTLKGKLQDYIDLLDSFARGLIESTNAIYAQSASHNIEGEPVEFNDNEAFK
EEEEECCCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCCCC
DTNYNIKNGSFDLIAYNTDGKEIARKTIAITPITTMNDIIQAINANTDDNKDNNAENDFD
CCCCEECCCCEEEEEECCCHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCH
DYFTASFNNETKKFIIQPKNASQGLFVSMKDNGTNFMGALKLNPFFQGDDASTISLNKEY
HHEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCEECCCCCCEEEECHHH
KKEPTTIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTSKINTD
CCCCCEECCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
AEKSGRILDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDT
HHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LLGIKQ
HHCCCC
>Mature Secondary Structure 
GGILSSLNTSYTGLQAHQSMVDVTGNNISNASDEFYSRQRVIAKPQEAYMYGTKNVNMG
CCCHHHCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHEEEECCCCCCC
VDIEAIERVHDEFVFSRYTKANYENTYYDTEFSHLKEASAYFPDIDEASLFTDLQDYFNS
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
WKELSKNAKDSAQKQALAQKTEALTHNIKDTRERLTTLQHKASEELKSVIKEVNSLGSQI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEINKRIKEVENNKSLKHANELRDKRDELEFHLRELLGGNVFKSSIKTHSLIDKDSADFD
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC
ESYNLNIGHGFNIIDGSIFHPLVIKESENKGGLNQVYFQSDDFKVTNITDKLNQGKVGAL
CCCCEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEECCCEEEEEHHHHCCCCCCEEE
LNVYNDGSNGTLKGKLQDYIDLLDSFARGLIESTNAIYAQSASHNIEGEPVEFNDNEAFK
EEEEECCCCCEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCEECCCCCCCC
DTNYNIKNGSFDLIAYNTDGKEIARKTIAITPITTMNDIIQAINANTDDNKDNNAENDFD
CCCCEECCCCEEEEEECCCHHHHHHHEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCH
DYFTASFNNETKKFIIQPKNASQGLFVSMKDNGTNFMGALKLNPFFQGDDASTISLNKEY
HHEEECCCCCCEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCEECCCCCCEEEECHHH
KKEPTTIRPWLAPINGNFDVANMMQQLQYDSVDFYNDKFDIKQMKISEFYQFLTSKINTD
CCCCCEECCEEECCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
AEKSGRILDTKKSMLETIKKEQLSISQVSVDEEMVNLIKFQSGYAANAKVITAIDRMIDT
HHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LLGIKQ
HHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 8045879 [H]