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The map label for this gene is atpF

Identifier: 109947165

GI number: 109947165

Start: 510569

End: 511084

Strand: Direct

Name: atpF

Synonym: Hac_0578

Alternate gene names: 109947165

Gene position: 510569-511084 (Clockwise)

Preceding gene: 109947164

Following gene: 109947166

Centisome position: 32.86

GC content: 34.69

Gene sequence:

>516_bases
ATGGTGTTAGTTAAAATGGCGTTAGGGTTTTTGATCCTTTTAAGTCCCTTGTGTGCGATGGAATTGGATATTTCACAAAC
AGATATTATAGAGCGTTCTTTAAACTTTCTCTTGTTTGTGGGGATTTTGTGGTATTTTTTGGCTAAAAAATTACGCTCAT
TCTTGCACGCTAAAAGCCTTGAGATCTCTAAACACTTAGACGAGATCCAAGCCCAACTCAAAGCGAGTAAAGAGAATAAG
AAAAAACTCTTAAAAGAATTAGAGCAAGCCAAAGAAAAGGCTGAATTGATCGTTTCTGATGCGAATAAAGAAGCCTACAC
GATCACGCAAAAATACGAATTGCAAACCAAAATAGATGTGGAAAATTTGATCAAAAATTCTAAGGCGTTGATGGATTTAG
AAGTTAAAAAGATCAAAAGAGAGTTGGTTGAAAGCGTTTTTAAAGATTTAAGAGAGAGTAAAAAAGTCTCTTTCAGCACG
CAAGATTGCGTGAATATTTTGAAACAAAGGCTTTAA

Upstream 100 bases:

>100_bases
AAATGAAAAACAAGCCTTAAAAGAGCAGTTGCAAGCGCAAATGCCGGTATTTGAAAACGAGTTGAATAAGCGTGTGGCTA
TGGGTTTAGGGGGTTGATAG

Downstream 100 bases:

>100_bases
ATGCAAGATTTAAAAGTGATCTCTAAGCATTATGTCAAGGCGTTAAAAAACCACACTAAAGATGATTTAGCGTTATTAGA
AGAAATGGTTGTGGGGCTTA

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MVLVKMALGFLILLSPLCAMELDISQTDIIERSLNFLLFVGILWYFLAKKLRSFLHAKSLEISKHLDEIQAQLKASKENK
KKLLKELEQAKEKAELIVSDANKEAYTITQKYELQTKIDVENLIKNSKALMDLEVKKIKRELVESVFKDLRESKKVSFST
QDCVNILKQRL

Sequences:

>Translated_171_residues
MVLVKMALGFLILLSPLCAMELDISQTDIIERSLNFLLFVGILWYFLAKKLRSFLHAKSLEISKHLDEIQAQLKASKENK
KKLLKELEQAKEKAELIVSDANKEAYTITQKYELQTKIDVENLIKNSKALMDLEVKKIKRELVESVFKDLRESKKVSFST
QDCVNILKQRL
>Mature_171_residues
MVLVKMALGFLILLSPLCAMELDISQTDIIERSLNFLLFVGILWYFLAKKLRSFLHAKSLEISKHLDEIQAQLKASKENK
KKLLKELEQAKEKAELIVSDANKEAYTITQKYELQTKIDVENLIKNSKALMDLEVKKIKRELVESVFKDLRESKKVSFST
QDCVNILKQRL

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_HELAH (Q17Y82)

Other databases:

- EMBL:   AM260522
- RefSeq:   YP_664393.1
- STRING:   Q17Y82
- GeneID:   4177107
- GenomeReviews:   AM260522_GR
- KEGG:   hac:Hac_0578
- NMPDR:   fig|382638.8.peg.561
- eggNOG:   COG0711
- HOGENOM:   HBG578849
- OMA:   LMDLEVK
- ProtClustDB:   PRK08475
- BioCyc:   HACI382638:HAC_0578-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 19786; Mature: 19786

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x12d14d28)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLVKMALGFLILLSPLCAMELDISQTDIIERSLNFLLFVGILWYFLAKKLRSFLHAKSL
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EISKHLDEIQAQLKASKENKKKLLKELEQAKEKAELIVSDANKEAYTITQKYELQTKIDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCH
ENLIKNSKALMDLEVKKIKRELVESVFKDLRESKKVSFSTQDCVNILKQRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCH
>Mature Secondary Structure
MVLVKMALGFLILLSPLCAMELDISQTDIIERSLNFLLFVGILWYFLAKKLRSFLHAKSL
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EISKHLDEIQAQLKASKENKKKLLKELEQAKEKAELIVSDANKEAYTITQKYELQTKIDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHCCH
ENLIKNSKALMDLEVKKIKRELVESVFKDLRESKKVSFSTQDCVNILKQRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA