Definition | Helicobacter acinonychis str. Sheeba chromosome, complete genome. |
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Accession | NC_008229 |
Length | 1,553,927 |
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The map label for this gene is pabB [H]
Identifier: 109947144
GI number: 109947144
Start: 484327
End: 486018
Strand: Direct
Name: pabB [H]
Synonym: Hac_0553
Alternate gene names: 109947144
Gene position: 484327-486018 (Clockwise)
Preceding gene: 109947143
Following gene: 109947145
Centisome position: 31.17
GC content: 35.7
Gene sequence:
>1692_bases ATGATTTTTGGGGATTTTAAATATCAAAAGAGTATTAAAAAACTAACAGCGACTAATTTTAACGAGCTTAAAAACGCCTT GGATTTTATCTCTCAAAATAGGGGGAATGGGTATTTTGTGGGGTATCTTTTGTATGAAGCACGCCTAGCGTTTTTAGATG AAACTTTTCAAAGCCAAACCCCTTTTTTGTATTTTGAACAATTTTTAGAAAGGAAAAAATACTCTTTAGAGCCTTTAAAA GAGCATGCGTTTTACCCTAAAATCCATAGCTCTTTAGATCAAAAAACTTATTTCAAGCAGTTTAAAACTATTAAAGAGCA TCTAAAAAACGGCGATACCTATCAAGTGAATCTCACAATGGATTTATTTTTAAACACCAAAGCCAAACTAAAGCGCGTTT TTTGCGAGGTAGCGTGCAACCAAAACACGCCTTTTAAGGCGTTTATAGAAAATGAGTTTTGGAGTGTTTTAAGCTTTTCG CCAGAGTTGTTTTTTGAATTGGAGTTTTTAGATACAGCCATTAAGATTATCACAAAGCCCATGAAAGGCACGATCGCTCG CTCTAATGACCCTTTAATAGATGAAAAAAACCGATATTTTTTGCAAAATGATGACAAAAATAGAAGCGAAAATGTGATGA TTGTGGATTTACTGCGTAACGATTTGAGCCGTTTAGCTTTAAAAAATAGCGTGAAAGTCAATCAATTGTTTGAAATCATA AGTCTCTCTAGTGTGTATCAAATGATAAGCGAGATTGAAGCGCAATTGCCCCTAAAAACAAGCTTATTTGAGATTTTCAA GGCGTTATTCCCTTGCGGATCGGTTACCGGATGCCCTAAAATCAAAACCATGCAAATCATTGAAAACTTAGAAAAACGCC CTAGGGGGGTGTATTGCGGAGCGATAGGCATGGTTGAAGAAAAAAAAGCCCTTTTTAGCGTGCCCATCCGCACTTTAGAA AAAAGAGCGCACGAAGATGTTTTGCATTTGGGGGTGGGGAGTGGGGTTACTTATAAAAGTGGAGCGTTAGAGGAATATGA AGAGAGTTTTTTAAAATCCTTTTTTGTGATGCCCAAAATAGAATTTGAGATTGTAGAGACGATGAAGGTCATAAAAATCG ATCAAAAATTAGAGATTAAAAATAAAAACGCCCATAAAGAACGCTTGATTAACAGCGCTCAATATTTTAATTTCCAATAC GATGAAAATCTTTTGGACTTTGAATTAGAAAAGGAAGGGGTTTTAAGGGTTTTACTCAATAAAAAGGGCAAGCTCATTAA AGAGTATAAAAATTTAGAGCCTTTAAAAAGCCTGGAAGTGCGTTTGAGTGAGACCCCCATTGACAAACACAATGATTTTT TATACCACAAGATTACTTATGCCCCTTTTTATCAAAAGGCTCGAGCACTCATTAAAAAAGGCGTTATTTTTGATGAAATC TTTTATAACCAAGATTTTAAGCTCACCGAAGGAGCTAGGAGCAATCTTATTTTAGAAATCCACAACAAGCTTCTAACCCC TTATTTTAGCGCGGGTGCATTAAATGGGACAGGTGTGATGGGGCTGTTAAAAAAGGGTCTTGTTGAACATGCCCCTTTAA AATTACATGATTTGCAAAGAGCGACTAAAATCTATTGCATCAACGCACTATATGGCTTAGTGGAAGTGAAAATAAAACGG ATTTTACCATAA
Upstream 100 bases:
>100_bases CAGAGAAGAAGATCTAGGATTAGAGGGCTTGAGAAGGGCTAAAATGAGCTATAATCCGGTGTTTTTGATAGACAAATACG AAGCCGTTGCTAGAAATTAA
Downstream 100 bases:
>100_bases AATAGAGTTACTAAAATCTATTTTTTAAAACAAGTTACTAAATTCCACCAAATAAGTTAAATTCCACCAATTAATAATCA TATAATCATAATGATTAAAG
Product: para-aminobenzoate synthetase component I
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 563; Mature: 563
Protein sequence:
>563_residues MIFGDFKYQKSIKKLTATNFNELKNALDFISQNRGNGYFVGYLLYEARLAFLDETFQSQTPFLYFEQFLERKKYSLEPLK EHAFYPKIHSSLDQKTYFKQFKTIKEHLKNGDTYQVNLTMDLFLNTKAKLKRVFCEVACNQNTPFKAFIENEFWSVLSFS PELFFELEFLDTAIKIITKPMKGTIARSNDPLIDEKNRYFLQNDDKNRSENVMIVDLLRNDLSRLALKNSVKVNQLFEII SLSSVYQMISEIEAQLPLKTSLFEIFKALFPCGSVTGCPKIKTMQIIENLEKRPRGVYCGAIGMVEEKKALFSVPIRTLE KRAHEDVLHLGVGSGVTYKSGALEEYEESFLKSFFVMPKIEFEIVETMKVIKIDQKLEIKNKNAHKERLINSAQYFNFQY DENLLDFELEKEGVLRVLLNKKGKLIKEYKNLEPLKSLEVRLSETPIDKHNDFLYHKITYAPFYQKARALIKKGVIFDEI FYNQDFKLTEGARSNLILEIHNKLLTPYFSAGALNGTGVMGLLKKGLVEHAPLKLHDLQRATKIYCINALYGLVEVKIKR ILP
Sequences:
>Translated_563_residues MIFGDFKYQKSIKKLTATNFNELKNALDFISQNRGNGYFVGYLLYEARLAFLDETFQSQTPFLYFEQFLERKKYSLEPLK EHAFYPKIHSSLDQKTYFKQFKTIKEHLKNGDTYQVNLTMDLFLNTKAKLKRVFCEVACNQNTPFKAFIENEFWSVLSFS PELFFELEFLDTAIKIITKPMKGTIARSNDPLIDEKNRYFLQNDDKNRSENVMIVDLLRNDLSRLALKNSVKVNQLFEII SLSSVYQMISEIEAQLPLKTSLFEIFKALFPCGSVTGCPKIKTMQIIENLEKRPRGVYCGAIGMVEEKKALFSVPIRTLE KRAHEDVLHLGVGSGVTYKSGALEEYEESFLKSFFVMPKIEFEIVETMKVIKIDQKLEIKNKNAHKERLINSAQYFNFQY DENLLDFELEKEGVLRVLLNKKGKLIKEYKNLEPLKSLEVRLSETPIDKHNDFLYHKITYAPFYQKARALIKKGVIFDEI FYNQDFKLTEGARSNLILEIHNKLLTPYFSAGALNGTGVMGLLKKGLVEHAPLKLHDLQRATKIYCINALYGLVEVKIKR ILP >Mature_563_residues MIFGDFKYQKSIKKLTATNFNELKNALDFISQNRGNGYFVGYLLYEARLAFLDETFQSQTPFLYFEQFLERKKYSLEPLK EHAFYPKIHSSLDQKTYFKQFKTIKEHLKNGDTYQVNLTMDLFLNTKAKLKRVFCEVACNQNTPFKAFIENEFWSVLSFS PELFFELEFLDTAIKIITKPMKGTIARSNDPLIDEKNRYFLQNDDKNRSENVMIVDLLRNDLSRLALKNSVKVNQLFEII SLSSVYQMISEIEAQLPLKTSLFEIFKALFPCGSVTGCPKIKTMQIIENLEKRPRGVYCGAIGMVEEKKALFSVPIRTLE KRAHEDVLHLGVGSGVTYKSGALEEYEESFLKSFFVMPKIEFEIVETMKVIKIDQKLEIKNKNAHKERLINSAQYFNFQY DENLLDFELEKEGVLRVLLNKKGKLIKEYKNLEPLKSLEVRLSETPIDKHNDFLYHKITYAPFYQKARALIKKGVIFDEI FYNQDFKLTEGARSNLILEIHNKLLTPYFSAGALNGTGVMGLLKKGLVEHAPLKLHDLQRATKIYCINALYGLVEVKIKR ILP
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=295, Percent_Identity=34.9152542372881, Blast_Score=182, Evalue=7e-47, Organism=Escherichia coli, GI1787518, Length=265, Percent_Identity=25.6603773584906, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6320935, Length=270, Percent_Identity=28.8888888888889, Blast_Score=128, Evalue=2e-30, Organism=Saccharomyces cerevisiae, GI6324361, Length=338, Percent_Identity=26.9230769230769, Blast_Score=91, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 65374; Mature: 65374
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFGDFKYQKSIKKLTATNFNELKNALDFISQNRGNGYFVGYLLYEARLAFLDETFQSQT CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCC PFLYFEQFLERKKYSLEPLKEHAFYPKIHSSLDQKTYFKQFKTIKEHLKNGDTYQVNLTM CHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE DLFLNTKAKLKRVFCEVACNQNTPFKAFIENEFWSVLSFSPELFFELEFLDTAIKIITKP EEEECCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHCC MKGTIARSNDPLIDEKNRYFLQNDDKNRSENVMIVDLLRNDLSRLALKNSVKVNQLFEII CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHH SLSSVYQMISEIEAQLPLKTSLFEIFKALFPCGSVTGCPKIKTMQIIENLEKRPRGVYCG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE AIGMVEEKKALFSVPIRTLEKRAHEDVLHLGVGSGVTYKSGALEEYEESFLKSFFVMPKI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC EFEIVETMKVIKIDQKLEIKNKNAHKERLINSAQYFNFQYDENLLDFELEKEGVLRVLLN HHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHEEEEECCCCCCEEECHHHHHHHHHC KKGKLIKEYKNLEPLKSLEVRLSETPIDKHNDFLYHKITYAPFYQKARALIKKGVIFDEI CCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHCCHHHHH FYNQDFKLTEGARSNLILEIHNKLLTPYFSAGALNGTGVMGLLKKGLVEHAPLKLHDLQR HCCCCCEECCCCCCCEEHEEHHHHHCCHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH ATKIYCINALYGLVEVKIKRILP HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIFGDFKYQKSIKKLTATNFNELKNALDFISQNRGNGYFVGYLLYEARLAFLDETFQSQT CCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHCCC PFLYFEQFLERKKYSLEPLKEHAFYPKIHSSLDQKTYFKQFKTIKEHLKNGDTYQVNLTM CHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE DLFLNTKAKLKRVFCEVACNQNTPFKAFIENEFWSVLSFSPELFFELEFLDTAIKIITKP EEEECCHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCHHHEEEHHHHHHHHHHHHCC MKGTIARSNDPLIDEKNRYFLQNDDKNRSENVMIVDLLRNDLSRLALKNSVKVNQLFEII CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHH SLSSVYQMISEIEAQLPLKTSLFEIFKALFPCGSVTGCPKIKTMQIIENLEKRPRGVYCG HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEE AIGMVEEKKALFSVPIRTLEKRAHEDVLHLGVGSGVTYKSGALEEYEESFLKSFFVMPKI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCHHHHHHHHHHHHHHCCCC EFEIVETMKVIKIDQKLEIKNKNAHKERLINSAQYFNFQYDENLLDFELEKEGVLRVLLN HHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHEEEEECCCCCCEEECHHHHHHHHHC KKGKLIKEYKNLEPLKSLEVRLSETPIDKHNDFLYHKITYAPFYQKARALIKKGVIFDEI CCCHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHCCHHHHH FYNQDFKLTEGARSNLILEIHNKLLTPYFSAGALNGTGVMGLLKKGLVEHAPLKLHDLQR HCCCCCEECCCCCCCEEHEEHHHHHCCHHCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHH ATKIYCINALYGLVEVKIKRILP HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6330050; 9097040; 9278503; 7896119; 2251281; 7592344 [H]