Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109897778

GI number:

Start: 1750968

End: 1752842

Strand: Direct

Name: Not Available

Synonym: Patl_1456

Alternate gene names: NA

Gene position: NA

Preceding gene: 109897777

Following gene: 109897779

Centisome position: NA

GC content: NA

Gene sequence:

>1875_bases
ATGCATAATTTCATTCGTTTATTACGCCTATGTCGGCCCCACGCAGGGGCGATGTTATTGGGTGTTTTTCTAACGGTATT
GACCGTATTGGCCAACGTGGGATTGCTCGCTATTTCCGGCTGGTTTTTAGCGTCCATGGCGGCTGCTGGATTAGCCGCAG
CACAAATGAATTATTTTACACCCGCTGGCATTATTCGCTTTTTAGCCATTGTGCGCACGGCATCTCGTTATGGGGAGCGC
CTTGTTACACATAACGCGACCTTTCTACTGCTGAGTGAAATTCGCGTCAGCGTGTTTGCCACGCTAAGTCAGTTGAATAA
TCAACAACTGGCCATGAATCGCAGTGCTGATTTGTTTAATCGTATGCAAAACGATGTGGATGCCCTCGACAAATTTTATC
TCAATGTGTTGCTGCCAATGCTGGTGGCATTGGTATGCATACCGATTGTAATTTGGATAATCGCCGGTTTTAATCCACAA
GTGGCGTTAGTCTGCTTAGGTGCACTGTTGTTAGTGGGGGTGGGGTTACCTGTGTTGCTCAGTGCCAAGCTTAGCCGCAC
TGCAGCGCAGCAGACTGAGCGCTCAGCGCAGCTTCGTGACGCCTTATCTGATATGTTAACAGGGCAACGGGAGTTGGCCT
TATATCAAGCAACCGACAGCCAATTAGCAAAATGTAACGCAATACAGCAAAACTACAATGATTTGCTGGATAAGCGACAC
GCGGCACTCGCTGACAGTGATGGGGTGAGCTTAATCGTTGTGCAGCTAGCCATGCTTGCAAGTGTTTGCGTGCTGGTGCC
TTTGGTCTTCTCACAGCAAATAGAAAACGTGCATTTAGCTATGCTGTCATTATTTGTTTTAGCCAGTTTTGAAACTGTGC
TGACTTTGCCAAATGCCTTTATTCAACTCCCTGTAGCCTTAAGTGCCGCTGGGCGTATTTTTGCCTTGCAAGACGTGTTA
GCCAAAACCCAAAATACATTGAATTCGAGTCCCAACACGACAACTAGCAAAGGACAAGATAAGCAACCTGAGCCGATACT
GCAGCTAAATCAACCGGTACATCAGGCCCCCAGCGTAACAAAAAGCCTCGGATTAAAACTGAAAAATGTCAGTTATCAGT
ATGAGAGTGATCCATTTACCGAGAACCTTTCCATTAAACCCTCGACGGGCAACCATCATTTTGCATTAGAGAATATTAGT
CTGTCGATTAACCCGGGCCAAAACGTGGCGCTTGTTGGCCCAAGCGGCAGCGGTAAGTCGACTTTGGTCAATTTGCTAAG
TGGCTTATGGCCTGAGCAGCACGGCAGTATTTGTGTTACGCACGAGGCCAACGAGCAAATTGATAAAGAATATGCCATTA
AAGGGCTCACCTTTGCGCTACGCACCAAACTCATCGCGATCCTCGCCCAGCAACACCATATTTTTGATGGCACCATCGCG
GATAATTTGCGCTACGCCGCGCCTGATGCCACCCACGAACAAATGCTACATGCCTGTGAGCAAGCTCAGTTGGGAGACTG
GGTGTTCACTCTGCCAAATAAATTGAATACGCGATTAGGCAGTGCAGGTAGACGAATTTCACAAGGCCAATCTCGCCGCT
TAGCGATTGCACAGTTGTTATTGCGTCGCCCCGCATTATTGGTGTTAGATGAACCCACAGAAGGCCTCGATAACCAATCT
AAGCAAGCCGTTATGAAAGCTATCATGGGGGCGATGAATGAGAGTACGGTGCTGTGTATCACGCACGATCCAGCGCTGTT
GTGCAATATGGACAAGATCATATGGTTGGAAAATGGCCAGCTTAAAGGGGAGGGCACCCACCAAGTGCTATTGGCAGAGC
ATCAGCAATATAAAGAGTTAATCACGCGCATTTAG

Upstream 100 bases:

>100_bases
GAAGCTGGGCGCGTAGTGCAACAAGGCAATTATCAGACATTGAGCCAGCAGAATGGGCCGTTTAAGCAATTGCTAAATAG
CGATAATCAGGCAGGTGCTT

Downstream 100 bases:

>100_bases
TCATGTGAATTAATCCCATTCGCTGACCTGAGACAGAGTGAAAGTGTTCAATTTCTTGAAGAGGATTTTGCTGAAGAGCT
TTTCTAAAAAGCTTTGTTCA

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>624_residues
MHNFIRLLRLCRPHAGAMLLGVFLTVLTVLANVGLLAISGWFLASMAAAGLAAAQMNYFTPAGIIRFLAIVRTASRYGER
LVTHNATFLLLSEIRVSVFATLSQLNNQQLAMNRSADLFNRMQNDVDALDKFYLNVLLPMLVALVCIPIVIWIIAGFNPQ
VALVCLGALLLVGVGLPVLLSAKLSRTAAQQTERSAQLRDALSDMLTGQRELALYQATDSQLAKCNAIQQNYNDLLDKRH
AALADSDGVSLIVVQLAMLASVCVLVPLVFSQQIENVHLAMLSLFVLASFETVLTLPNAFIQLPVALSAAGRIFALQDVL
AKTQNTLNSSPNTTTSKGQDKQPEPILQLNQPVHQAPSVTKSLGLKLKNVSYQYESDPFTENLSIKPSTGNHHFALENIS
LSINPGQNVALVGPSGSGKSTLVNLLSGLWPEQHGSICVTHEANEQIDKEYAIKGLTFALRTKLIAILAQQHHIFDGTIA
DNLRYAAPDATHEQMLHACEQAQLGDWVFTLPNKLNTRLGSAGRRISQGQSRRLAIAQLLLRRPALLVLDEPTEGLDNQS
KQAVMKAIMGAMNESTVLCITHDPALLCNMDKIIWLENGQLKGEGTHQVLLAEHQQYKELITRI

Sequences:
NA

Specific function: NA

COG id: COG4987

COG function: function code CO; ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA