Definition | Pseudoalteromonas atlantica T6c chromosome, complete genome. |
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Accession | NC_008228 |
Length | 5,187,005 |
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Identifier: 109897690
GI number:
Start: 1640599
End: 1643475
Strand: Direct
Name: Not Available
Synonym: Patl_1365
Alternate gene names: NA
Gene position: NA
Preceding gene: 109897686
Following gene: 109897691
Centisome position: NA
GC content: NA
Gene sequence:
>2877_bases ATGGGCAAGTTTCTCGTGGTAAAAAAAATCGTTATATTATCGACATTTGCTGGCATTTTATCCGCATGTCAACCTACCAA CTCTGTGACACAACCTACGACTACAAATTTACCCACTGGGGTAACCTTAGTCGCTGAGCAGGGTGCAAGTGACGACCAAG TCAGGATCCCTTATAAAAAGTATCGTCTTGCCAATGGATTAACCCTAGTCTTACACGAAGACCATTCCGATCCTCTTGTA CATGTTGATGTGACCTACCACGTGGGCTCAGCTCGAGAAGAAGTGGGTAAGTCAGGCTTTGCTCATTTTTTTGAACACAT GATGTTCCAAGGCTCGAAAAACGTTGCAGATGACGAACATATAAAAATAGTGACTGAGGCTGGTGGTAATATGAATGGCA CCACCAATTCTGACCGCACTAACTATTATGAAACGGTTCCGGCTAATCAACTTGAAAAAATGATGTGGCTTGAAGCCGAT CGCATGGGTTTCTTGCTCGGCTCAGTGACTCAAGAAAAGTTTGAGATACAGCGCGAAACGGTCAAAAACGAGCGTGGTCA GAGTTACGACAACCAGCCTTATGGCCTGCGTAGTGAGCGTAATTCTGAAGCCTTGTATCCGGCAGGGCACCCTTATTCGT GGTCAACCATTGGATATATTGAGGATTTGAATCGCGTTAACGTAGATGACCTAAAAGCGTTCTTCAAACGCTGGTATGGC CCTAATAATGCGGTGTTGACTATTGGCGGTGACATCGAGCCAGAGCAAGTGCTTGGATGGGCAAACAAATACTTCGGTTC TATTCCTGCTGGCCCAAGTGTGAAAAACGCTGAGAAAGAACTTGTCACCCTAGATGAAGCGCGCTTTGTTACTTTAGAAG ATGAAATACACTTGCCCTTATTGCAGGTGACGTTTCCTACTGTTTATGTGCGCCATGAAGACGAGGCGCCGCTTGATGTG TTATCCAATATTCTAGGGGCGGGTAAAACGTCATTGTTTTATAAGAATCTGGTCAAAGATGGCTACGCAGTCCAAGCAAT GGTTTCTCACCCCTGCCGAGAGCTGGCCTGTGAATTTCAATTGATAGCACTTGCTAACCCGCAAAATAGCACCAACTTGT CTGAGCTTTATGCACGTTTCGAGCAAACGTTGGCTGAGTTTGAAGAGCGCGGTGTGAGCGAAGACGACTTAAACCGCACT AAAGTGGGTATTGAATCTTCAACGATCTTCGGTTTGCAAAGTGTGTCCGGTAAGGTATCAACGCTCGCCTCAAATCAAAC CTTTGACGGTGAGCCTGACATGGTGCAGTACGATTTGGACCGCTACAATGCTGTCACAGCACAAGACGTGATGCGTGTTT ACCAGCGTTACATAAAAGATAAACCGAGTGTGGTGTTAAGTATCGTGCCTAATGGCCAAGTGGATTTAGCTGCCAAGCCG GCTAATTTCACGGTCCCTAAGCGTCAACTAGATAATATCAAAACAGTGCAAGCGCACATCGAACAAGCCACGATTGTTGA TACCTTCGATCGCAGTGTTCAGCCCCCAGCGGGGCCTTCACCTGTGGTGAGCGTGCCTGATTTTGACGAGCAGCGTTTTG AGAACGGGTTAACCCTTGTCAGCTTAACAACGGATGAAACGCCCACGGTGTCGATTAGCTTCAACATGGAAGGCGGGCCT TTACTTGACCCTATCGACAAGGCTGGTTTAGCGTCTTTTACTGCGCAAATGATGAATGAAACGACCAAAGGCTTCACCAA TGAAGAAATGGCCAATCAATTAGCGTTATTAGGTAGCAGCATTCGTTTCGATGCAAATGGCCGCTTTACCACGGTGCGTA TTAATAGTTTGTCACGTAACTTAGATGCAACCTTGGCGTTATTTAAAAAGAAGATGTTCAGCCCCGCGTTTTTACAAAGT GATTTCCAGCGATTAAAACAACGTTCTGCTCAGTCACTTCAACAGCAAGTTAAAAACCCGTCTGTTTTGGCAAGTCGAGC GGTCAGCGAGTTACTGTTTGGCAAGGATAACCGTGTCAGCCTGCCAGATTCTGGCACCCTGAACACGATTCAAAATATTT CACTAGATGATGTGAAAGCTTACTATCAGCAATATTATTCACCTTCGAAAGCAAACGTAGTCGTAGTGGGAGACGTAAAT ACGCAATCTTTGCAGACATCTTTAGACTTTTTAACAAATTGGCCAGCAAAGCCTTATCAGATTAAGGATTATGCTGAATT TCCTAAGATGGGTAAGCCGGTTATTTATCTGGTGGATAAACCAGGGGCAAAGCAATCGGTTGTATCTATCTTTAAACCTT ACTTGCCATACGATGCCACAGGCGAGCAATTTAGAAGTAAGCTGATGAATTTCGCTCTTGGTGGCGTATTCAGTAGTCGT ATCAACCTGAATTTGCGCGAAGATAAAGGCTATACCTATGGCGCTTCAACCAATTTTATTGGTGGCAAAACGCTAGGTTG GTTTAACGCTAGCGCTGACCTCAAGCAAGACAACACCGTTGATGGTATTCGTGAAATGCTCAGTGAAATAACTGAGTATC ATGAGAAAGGGATGACGCAAACTGAGTTAGAGCTGATGCGCAATGCCTTTACCCAAGGAGATGCATTAGAATATGAGACA CCGTCCAGCAAAGCGGGATTCCTGCGTCACCTGCTGACCTACGGCTTGGACAAATCGTACCGCGGGACGCAAAACAAGAT TATTCATAATATTGGTAAAGATGAACTGAATGCACTTGCTGCAAAGGTGCTTGATCCCAACTCAATGCAAGTTGTAGTCG TTGGAGATGCAAGTGTCATCCGCGCTCAGTTGGCAACGCTTGGAAGGGAAGTGGTTGACCTGACCGTTGAATATTAA
Upstream 100 bases:
>100_bases GGATCCTTTGAGCGGGCGGTAACATCGCGCGTTGCCAACCAGATAAGCTGGGTGACTTTATTATGAATGAAAGGGTAGAC TATTCAACTAGTGTAAATCA
Downstream 100 bases:
>100_bases TGCCTGAGCTGAGCGAATAATTGCTTAGCGAGGGTCTATATTCCTTGAAATAACTTTTACGCTCCCCATTTACTGTGGGT TGCTGACACTATTGGAATTT
Product: peptidase M16-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>958_residues MGKFLVVKKIVILSTFAGILSACQPTNSVTQPTTTNLPTGVTLVAEQGASDDQVRIPYKKYRLANGLTLVLHEDHSDPLV HVDVTYHVGSAREEVGKSGFAHFFEHMMFQGSKNVADDEHIKIVTEAGGNMNGTTNSDRTNYYETVPANQLEKMMWLEAD RMGFLLGSVTQEKFEIQRETVKNERGQSYDNQPYGLRSERNSEALYPAGHPYSWSTIGYIEDLNRVNVDDLKAFFKRWYG PNNAVLTIGGDIEPEQVLGWANKYFGSIPAGPSVKNAEKELVTLDEARFVTLEDEIHLPLLQVTFPTVYVRHEDEAPLDV LSNILGAGKTSLFYKNLVKDGYAVQAMVSHPCRELACEFQLIALANPQNSTNLSELYARFEQTLAEFEERGVSEDDLNRT KVGIESSTIFGLQSVSGKVSTLASNQTFDGEPDMVQYDLDRYNAVTAQDVMRVYQRYIKDKPSVVLSIVPNGQVDLAAKP ANFTVPKRQLDNIKTVQAHIEQATIVDTFDRSVQPPAGPSPVVSVPDFDEQRFENGLTLVSLTTDETPTVSISFNMEGGP LLDPIDKAGLASFTAQMMNETTKGFTNEEMANQLALLGSSIRFDANGRFTTVRINSLSRNLDATLALFKKKMFSPAFLQS DFQRLKQRSAQSLQQQVKNPSVLASRAVSELLFGKDNRVSLPDSGTLNTIQNISLDDVKAYYQQYYSPSKANVVVVGDVN TQSLQTSLDFLTNWPAKPYQIKDYAEFPKMGKPVIYLVDKPGAKQSVVSIFKPYLPYDATGEQFRSKLMNFALGGVFSSR INLNLREDKGYTYGASTNFIGGKTLGWFNASADLKQDNTVDGIREMLSEITEYHEKGMTQTELELMRNAFTQGDALEYET PSSKAGFLRHLLTYGLDKSYRGTQNKIIHNIGKDELNALAAKVLDPNSMQVVVVGDASVIRAQLATLGREVVDLTVEY
Sequences:
NA
Specific function: NA
COG id: COG0612
COG function: function code R; Predicted Zn-dependent peptidases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA