Definition Pseudoalteromonas atlantica T6c chromosome, complete genome.
Accession NC_008228
Length 5,187,005

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Identifier: 109897608

GI number:

Start: 1540954

End: 1543065

Strand: Direct

Name: Not Available

Synonym: Patl_1283

Alternate gene names: NA

Gene position: NA

Preceding gene: 109897607

Following gene: 109897614

Centisome position: NA

GC content: NA

Gene sequence:

>2112_bases
ATGCTTTTTTCTAAGCTCAGGCGCGCATCATTTTTCCAAAAGCAATTAATGGCGATCATCGGCACAAATTTGCTGATATT
GGCCATTGCTGCCTTTCTTATCTATTCCGCGTTTGTTGATGATTACCGCGACAACCTCGTTAAAACTATGGACAGCAACG
CCTCTTTGCTGTCAGCGGCAAGCCGCTCAGCGTTACTTTTTCATGATGAGCATGCAGGCCAGACGATCCTGGCGTCTTTA
GCTAAGATCCCAGCCATGCGATTTGCCCAATTACTAGACTCTGAAAAAAAGCGCTTTGCGACTTATACCCGGGACGATGC
AAGTTGGGATGTTATGTTAGATGACATCAAACCTGGACACTTTTTTACAAACGATAATCTTTACCTGACCCAAGACATTA
CCTTAGGGGAGGACGTACTTGGCTACATTGTTTTATCGGCTGATACTCATTCGCTACAGGCTCAGCAGCGACGGTACGGG
CGCATTGTACTGTGGGTATTTGCATTGGGTTCTTTGTTAGCCTACCTCCTGAATTGGCGTATGCAAAAGCGCTTACAGTC
ACCGGTTAAACGCCTTATTCACTTAGTTGATTACGTCGCCAAAGAAGGGCGTTACGATCAACGTATTTTCAATCGTCGAC
AAGACGATATTGGGCGCTTGGTCAACGGTATTAACTCTATGCTAGATACCATTGAAGAGCACCAATCAAAGTTGAGCGAA
CATCATGAGCATCTAGAAGGGCTAGTAGAGTTGCGCACAGAGCAATTGTACGAGCGTGCTAATTTTGATGCGTTAACACA
ACTACCAAATAGACATTCCCTGACAGAAAAAATTAGTCAGGCGATTGAAATAGCCCGTGAGCGTAAAACCAATCTAGCCT
TGATGTTTCTCGATTTAGACCGCTTTAAGGTCATAAATGATAGCTTAGGGCACTTCATGGGTGACAAACTGTTAATTGAA
GTGGCCAAGAAGATCCAACATAAACTAAGCGACAGTGACGTGGTAGGTCGTTGGGGGGGAGATGAATTCGTTGTGCTAAT
TCAAAACCCGAAGGAACTCAGCTCAGTGGATAGTTTGGCAAAAGAGATTATCGCATCTTTGAGTCTGCCGCTTATTGTAT
CTGGACATCAATTACACATCTCTACCAGTATTGGCATTGCGTGTTTTCCTGATGATGGCGACGATGCATCAAGTTTACTT
AAACATGCTGACACTAGCATGTATAAGGCAAAAGAATTGGGCCCTGGGCGGTTCCGCTTTTTTGACCAAGACATGTTGAA
TGACTCAGTGTGGCGATTAGAGCTAGAAACCCAATTGCGCCAAGCCTCCGCTCAACAGCAGTTTGCTTTGGTGTATCAGC
CTAAAGTGAATGTGAACGACGAACAACTGGTTGGTTTAGAAGCTTTAATAAGATGGAATAATGGCCAAGAATATATTAAT
CCAGCCACTTTCTTACCCATAGCAGAAGACATAGGGTTAATGGAATCCATCAGTGTGTGGGTGTTAAAGCAGGCATGCCA
GCAGAATGCAGATTGGCAGCGGGCGGGCTTTGATATTGTACCTGTTGCCGTGAACTTACCCGCATCGTTTTTGATGAGTC
CCCAGTGCCTCGAGTTGATCAAAGGCGCATTGCATCAATCGGGTTTAGCGGCGCAGTATTTGGAAATAGAAATCACTGAA
AATACCTTCATCGCATCTACCGAGTTAGCGGTTGATGTACTGAGTGCAATTCACGGTTTGGGGGTGAAAATCGCCATTGA
CGATTTTGGAACAGGCTACTCATGTATGAGTTATTTGCGCGACCTACCCATCAATACATTAAAGATAGACGGCATATTCA
TCAATGATTTAGTTGCGCCAGATTGTGTTCATGAGGGGAACGCTGAAGACCATCACTTACGGGATGAAGGCATAGTGCGC
ACTATTATCACCTTAGGCAAAAGCCTAGGGTTAAGTACGGTTGCTGAGTGTGTGGAACATGATTACCAAGTACAGATCTT
AAAATCGATGGGTTGTGACATCATCCAAGGCTATTTCTATAGCAAACCTTTAAAAGTGGTCGCACTAGAAGCATATCTCG
GTGCGCATGGCCGGGCTGCTAAAGAATCTTAA

Upstream 100 bases:

>100_bases
AAGAGCAAAGAGTGCGCTTTGAGTTTGATTTAGCACAATTAGCCAGAGTAGACGTGATAGTAAGCTCTGAATTGCTTAAA
TTAGCTAGGATTGCTCGATA

Downstream 100 bases:

>100_bases
CGTTGATGTGTATTCTCACTGAGCAGGCGTCTTGATAGCGCGAACATTTGACACAGTGCCCAAAGCGTAAGGCTCTAGTA
TGTAGTTCAAGGCTGTGAAT

Product: diguanylate cyclase/phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>703_residues
MLFSKLRRASFFQKQLMAIIGTNLLILAIAAFLIYSAFVDDYRDNLVKTMDSNASLLSAASRSALLFHDEHAGQTILASL
AKIPAMRFAQLLDSEKKRFATYTRDDASWDVMLDDIKPGHFFTNDNLYLTQDITLGEDVLGYIVLSADTHSLQAQQRRYG
RIVLWVFALGSLLAYLLNWRMQKRLQSPVKRLIHLVDYVAKEGRYDQRIFNRRQDDIGRLVNGINSMLDTIEEHQSKLSE
HHEHLEGLVELRTEQLYERANFDALTQLPNRHSLTEKISQAIEIARERKTNLALMFLDLDRFKVINDSLGHFMGDKLLIE
VAKKIQHKLSDSDVVGRWGGDEFVVLIQNPKELSSVDSLAKEIIASLSLPLIVSGHQLHISTSIGIACFPDDGDDASSLL
KHADTSMYKAKELGPGRFRFFDQDMLNDSVWRLELETQLRQASAQQQFALVYQPKVNVNDEQLVGLEALIRWNNGQEYIN
PATFLPIAEDIGLMESISVWVLKQACQQNADWQRAGFDIVPVAVNLPASFLMSPQCLELIKGALHQSGLAAQYLEIEITE
NTFIASTELAVDVLSAIHGLGVKIAIDDFGTGYSCMSYLRDLPINTLKIDGIFINDLVAPDCVHEGNAEDHHLRDEGIVR
TIITLGKSLGLSTVAECVEHDYQVQILKSMGCDIIQGYFYSKPLKVVALEAYLGAHGRAAKES

Sequences:
NA

Specific function: NA

COG id: COG5001

COG function: function code T; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA