| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is yebO [C]
Identifier: 108812543
GI number: 108812543
Start: 2665144
End: 2665419
Strand: Reverse
Name: yebO [C]
Synonym: YPN_2382
Alternate gene names: 108812543
Gene position: 2665419-2665144 (Counterclockwise)
Preceding gene: 108812545
Following gene: 108812542
Centisome position: 58.78
GC content: 48.19
Gene sequence:
>276_bases ATGTTGGATACAAATATGAGCGCGTTTGGTGTCGCCTCAATCGCCTTACCGCTGCTTACCGTTCTTTTCTTCTTGATCGT TTGGTTTTTTTTGAGCCGGGCGAGCGTGCGGGCCAATGAACAGGTCCGGTTATTACGAGAAATTGCCGAGCAGCAAAAAC GTCAGACAGAATTACTTACTGCATTACTGGAGAATGCCACGGGTACCCGTGACGGGCAGAACGACAGTGATACGGTTTCT CCTCTCGATTTCAAAGGCTTTATTCCAGAGCGATAA
Upstream 100 bases:
>100_bases TTTTTTAACTATCCGCACAGTCCTCTTTTTCTGATTCACCTTTGTTGTGGGCGGGGTGATAAGATAGTGCCTTCACCATG CATATGTAATAGGGTTGTCA
Downstream 100 bases:
>100_bases ACGTGTCCCGATGCTGGCACTACCAACAGGCAGTGTCAGCATGTTACCTGCAATTTTGTTGGCTACGGCAAAGGTAATTG CATCATAATTAGGGGGCCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 91
Protein sequence:
>91_residues MLDTNMSAFGVASIALPLLTVLFFLIVWFFLSRASVRANEQVRLLREIAEQQKRQTELLTALLENATGTRDGQNDSDTVS PLDFKGFIPER
Sequences:
>Translated_91_residues MLDTNMSAFGVASIALPLLTVLFFLIVWFFLSRASVRANEQVRLLREIAEQQKRQTELLTALLENATGTRDGQNDSDTVS PLDFKGFIPER >Mature_91_residues MLDTNMSAFGVASIALPLLTVLFFLIVWFFLSRASVRANEQVRLLREIAEQQKRQTELLTALLENATGTRDGQNDSDTVS PLDFKGFIPER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1740_YERPE (Q8ZFG9)
Other databases:
- EMBL: AL590842 - EMBL: AE009952 - EMBL: AE017042 - PIR: AC0212 - RefSeq: NP_669871.1 - RefSeq: NP_992843.1 - RefSeq: YP_002346740.1 - GeneID: 1147514 - GeneID: 1174577 - GeneID: 2765428 - GenomeReviews: AE009952_GR - GenomeReviews: AE017042_GR - GenomeReviews: AL590842_GR - KEGG: ype:YPO1740 - KEGG: ypk:y2567 - KEGG: ypm:YP_1481 - HOGENOM: HBG614272 - OMA: TRLIPER - ProtClustDB: CLSK880221 - BioCyc: YPES187410:Y2567-MONOMER - BioCyc: YPES214092:YPO1740-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10244; Mature: 10244
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x11557364)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDTNMSAFGVASIALPLLTVLFFLIVWFFLSRASVRANEQVRLLREIAEQQKRQTELLT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ALLENATGTRDGQNDSDTVSPLDFKGFIPER HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH >Mature Secondary Structure MLDTNMSAFGVASIALPLLTVLFFLIVWFFLSRASVRANEQVRLLREIAEQQKRQTELLT CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH ALLENATGTRDGQNDSDTVSPLDFKGFIPER HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430