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The map label for this gene is yecS [H]

Identifier: 108812437

GI number: 108812437

Start: 2559517

End: 2560179

Strand: Reverse

Name: yecS [H]

Synonym: YPN_2276

Alternate gene names: 108812437

Gene position: 2560179-2559517 (Counterclockwise)

Preceding gene: 108812438

Following gene: 108812436

Centisome position: 56.46

GC content: 49.62

Gene sequence:

>663_bases
ATGCCAGAAAGTATGCAATTGGTGCTGGATTCAGCACCATTTTTATTGAAGGGTGCCTGGCTAACGCTCCAACTGAGTCT
TGGGGGGATGTTTTTCGGGCTGCTCTTAGGGTTTATGCTGGCGATGATGCGGTTATCGCACTTCTGGCCTTTTTCACTTA
TTTCCCGCTTTTATGTCTCTATCTTCCGTGGTACGCCACTGATTGCTCAGTTATTCATGATTTACTATGGCCTGCCTCAG
TTTGGCATTGAACTGGAGCCGATGCCTGCGGCCTTGATTGGTTTATCGCTGAATACTGCCGCTTATACTTCAGAAACATT
GCGGGCGGCGATTTCATCTATTGAGAAAGGGCAGTGGGAAGCGGCAGCCAGTATCGGCATGACACGCTGGCAGGCACTGT
ATCGTGTTATTTTGCCACAGGCAGGGCGCACCGCCTTGCCCCCACTGGGCAACAGCTTTATTGGCTTGGTAAAGGATACC
TCTCTGGCCGCGACCATCCAGGTTCCGGAGCTTTTCCGTCAAGCACAATTGATCACATCACGTACGATGGAAGTTTTCAC
TATGTATCTGGCGGCATCGTTGATCTACTGGATAATGGCAACACTGTTATCGGCATTACAAAATCGGCTGGAAGCACATG
TTAATCGCCAGGATCAGGAGTAA

Upstream 100 bases:

>100_bases
AATTGTTAGCCGCAGTCAATAATGCTATTGCTGAGATGCAAAAAGACGGCACGCTAGCCAAGATCTCTGAGAAATACTTT
GGTGCGGACGTGACTCAATA

Downstream 100 bases:

>100_bases
CCATGAGTACCATTGATATTAAAAAATTGACCAAGCAGTTTAAGGGTCAACAGGTGCTGCACGGTATCGATCTTGAAGTG
AATAGTGGTGAAGTGGTGGC

Product: amino-acid ABC transporter (permease)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MPESMQLVLDSAPFLLKGAWLTLQLSLGGMFFGLLLGFMLAMMRLSHFWPFSLISRFYVSIFRGTPLIAQLFMIYYGLPQ
FGIELEPMPAALIGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDT
SLAATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQDQE

Sequences:

>Translated_220_residues
MPESMQLVLDSAPFLLKGAWLTLQLSLGGMFFGLLLGFMLAMMRLSHFWPFSLISRFYVSIFRGTPLIAQLFMIYYGLPQ
FGIELEPMPAALIGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDT
SLAATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQDQE
>Mature_219_residues
PESMQLVLDSAPFLLKGAWLTLQLSLGGMFFGLLLGFMLAMMRLSHFWPFSLISRFYVSIFRGTPLIAQLFMIYYGLPQF
GIELEPMPAALIGLSLNTAAYTSETLRAAISSIEKGQWEAAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDTS
LAATIQVPELFRQAQLITSRTMEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQDQE

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=220, Percent_Identity=80.4545454545455, Blast_Score=357, Evalue=1e-100,
Organism=Escherichia coli, GI1787030, Length=201, Percent_Identity=36.81592039801, Blast_Score=134, Evalue=4e-33,
Organism=Escherichia coli, GI1786873, Length=214, Percent_Identity=36.9158878504673, Blast_Score=125, Evalue=3e-30,
Organism=Escherichia coli, GI1787087, Length=230, Percent_Identity=30, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787086, Length=209, Percent_Identity=33.4928229665072, Blast_Score=108, Evalue=3e-25,
Organism=Escherichia coli, GI1788646, Length=219, Percent_Identity=30.1369863013699, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI87082239, Length=201, Percent_Identity=35.8208955223881, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1788645, Length=204, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1786874, Length=229, Percent_Identity=28.82096069869, Blast_Score=87, Evalue=9e-19,
Organism=Escherichia coli, GI48994930, Length=188, Percent_Identity=34.5744680851064, Blast_Score=78, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24547; Mature: 24416

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPESMQLVLDSAPFLLKGAWLTLQLSLGGMFFGLLLGFMLAMMRLSHFWPFSLISRFYVS
CCCHHHHHHCCCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IFRGTPLIAQLFMIYYGLPQFGIELEPMPAALIGLSLNTAAYTSETLRAAISSIEKGQWE
HHCCCHHHHHHHHHHHCCCHHCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHH
AAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLITS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHEEEEHHHHHHHHHHHHH
RTMEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQDQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PESMQLVLDSAPFLLKGAWLTLQLSLGGMFFGLLLGFMLAMMRLSHFWPFSLISRFYVS
CCHHHHHHCCCCHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
IFRGTPLIAQLFMIYYGLPQFGIELEPMPAALIGLSLNTAAYTSETLRAAISSIEKGQWE
HHCCCHHHHHHHHHHHCCCHHCCEECCCCHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHH
AAASIGMTRWQALYRVILPQAGRTALPPLGNSFIGLVKDTSLAATIQVPELFRQAQLITS
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCHHEEEEHHHHHHHHHHHHH
RTMEVFTMYLAASLIYWIMATLLSALQNRLEAHVNRQDQE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]