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The map label for this gene is yfcM [H]

Identifier: 108812354

GI number: 108812354

Start: 2478346

End: 2478888

Strand: Reverse

Name: yfcM [H]

Synonym: YPN_2192

Alternate gene names: 108812354

Gene position: 2478888-2478346 (Counterclockwise)

Preceding gene: 108812355

Following gene: 108812353

Centisome position: 54.67

GC content: 47.7

Gene sequence:

>543_bases
ATGAATCATCATTATCAGCAGTTAATCGATATCTTCAACACCTGTTTTAGCGGCGAATATAATACCCACTTGGTGAAAGG
TGACGATGAGCCGATCTATTTACCCGCCGATGAAGAATCTCCTCACCATCGGGTGATTTTTGCTCATGGCTATTATGCCA
GTGCGATGCATGAAATCTCCCATTGGTGTATTGCTGGCGAGGAACGGTGTAAGCAGGTAGATTTTGGCTATTGGTATTGC
CCGGATGGGCGCGATGCATTAACCCAGAGCCAATTTGAAGCGGTAGAGATCAAGCCACAGGCGTTGGAATGGATGTTTTG
TGTTGCCGCCGGTTTCCCTTTCAATGTCAGTTGCGACAACCTAGAGGGTGACTGCGAGCCAGATCGCATCATATTCCAGC
GAAAAGTTCGTGAACAGGTGTTGTGGTTGCTGGATCAGGGTATATCCACACGACCTCAGGGCTTTATTCAGGCACTCCAA
TCGTTTTACAATACGCCGCCGTTGGCTCCTGAACTCTTTCCTTACCCGGAAGATTTGATTTAG

Upstream 100 bases:

>100_bases
GCCTGGTTTTATATAGCTTGGCTTTTGCATCAATTTAGGCACCCACCACCGCTAAATACGGTGACTTTAGCGGTGTTTAC
CCTCTCTTACGGACCAGAGT

Downstream 100 bases:

>100_bases
CGCCTACCTGCAATGCCAATGACGTTGGGCACAAAATAAATATAATGAGGAAGAGTGATGATCGCAGAATTTGAAACACG
TATCTTGGCGCAAATCGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MNHHYQQLIDIFNTCFSGEYNTHLVKGDDEPIYLPADEESPHHRVIFAHGYYASAMHEISHWCIAGEERCKQVDFGYWYC
PDGRDALTQSQFEAVEIKPQALEWMFCVAAGFPFNVSCDNLEGDCEPDRIIFQRKVREQVLWLLDQGISTRPQGFIQALQ
SFYNTPPLAPELFPYPEDLI

Sequences:

>Translated_180_residues
MNHHYQQLIDIFNTCFSGEYNTHLVKGDDEPIYLPADEESPHHRVIFAHGYYASAMHEISHWCIAGEERCKQVDFGYWYC
PDGRDALTQSQFEAVEIKPQALEWMFCVAAGFPFNVSCDNLEGDCEPDRIIFQRKVREQVLWLLDQGISTRPQGFIQALQ
SFYNTPPLAPELFPYPEDLI
>Mature_180_residues
MNHHYQQLIDIFNTCFSGEYNTHLVKGDDEPIYLPADEESPHHRVIFAHGYYASAMHEISHWCIAGEERCKQVDFGYWYC
PDGRDALTQSQFEAVEIKPQALEWMFCVAAGFPFNVSCDNLEGDCEPDRIIFQRKVREQVLWLLDQGISTRPQGFIQALQ
SFYNTPPLAPELFPYPEDLI

Specific function: Unknown

COG id: COG3101

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_1563 [H]

Homologues:

Organism=Escherichia coli, GI1788666, Length=178, Percent_Identity=69.6629213483146, Blast_Score=276, Evalue=8e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007411 [H]

Pfam domain/function: PF04315 DUF462 [H]

EC number: NA

Molecular weight: Translated: 20867; Mature: 20867

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHHYQQLIDIFNTCFSGEYNTHLVKGDDEPIYLPADEESPHHRVIFAHGYYASAMHEIS
CCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCEEEEEECCHHHHHHHHHH
HWCIAGEERCKQVDFGYWYCPDGRDALTQSQFEAVEIKPQALEWMFCVAAGFPFNVSCDN
HHHHCCHHHHHCCCCCEEECCCCHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCCCCCCC
LEGDCEPDRIIFQRKVREQVLWLLDQGISTRPQGFIQALQSFYNTPPLAPELFPYPEDLI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNHHYQQLIDIFNTCFSGEYNTHLVKGDDEPIYLPADEESPHHRVIFAHGYYASAMHEIS
CCHHHHHHHHHHHHHHCCCCCCEEECCCCCEEEEECCCCCCCEEEEEECCHHHHHHHHHH
HWCIAGEERCKQVDFGYWYCPDGRDALTQSQFEAVEIKPQALEWMFCVAAGFPFNVSCDN
HHHHCCHHHHHCCCCCEEECCCCHHHHHHHHHHEEEECHHHHHHHHHHHCCCCCCCCCCC
LEGDCEPDRIIFQRKVREQVLWLLDQGISTRPQGFIQALQSFYNTPPLAPELFPYPEDLI
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]