Click here to switch to the map view.

The map label for this gene is ubiX [H]

Identifier: 108812336

GI number: 108812336

Start: 2457591

End: 2458163

Strand: Reverse

Name: ubiX [H]

Synonym: YPN_2174

Alternate gene names: 108812336

Gene position: 2458163-2457591 (Counterclockwise)

Preceding gene: 108812337

Following gene: 108812335

Centisome position: 54.21

GC content: 46.77

Gene sequence:

>573_bases
ATGAAGCGACTTATTATTGGCATTAGTGGTGCAAGTGGTGCCATTTATGGTGTGCGGCTGTTACAGGTGCTGCAACATGT
CGAAGGCGTGGAAACCCATTTGATTATCAGCAATGCTGCCCGTCAAACACTGGCGCTCGAAACCGACTACAGCGTCAAGG
ACGTCCAAGAATTTGCCGATGTGGTCCATGATTTTCGGGACATTGCGGCTTGTATCTCTTCTGGTTCATTTAAGACCGAT
GGCATGGTTATTTTACCTTGCTCCATCAAAACACTGTCTGGCATTGTCCATAGTTATACCGATGGTTTATTGACCCGCGC
TGCCGATGTGATCCTTAAAGAACGTCGCCGTTTGGTGCTTTGTGTCCGCGAAACCCCCCTGCATTTAGGCCACCTCCGCT
TAATGGTGCAAGCCGCCGAATTAGGTGCTGTGATTATGCCGCCAATGCTTGCGTTCTATCATCAGCCACAAACTATTCAG
GACATTATTGATCAAACAGTTAATCGCATCATCGATCAGTTTGATATTGAGTTACCTAAAGATCTGTTTACGCGCTGGCA
AGGTAAAAACTAA

Upstream 100 bases:

>100_bases
ACCTGATGCGGCAAAGTTTGGTATCATGCTAATAGATATGTTTTCTGCATATATATTGGACATTTTAATGCGATAGAGCA
TCAGTATGAGGCAGTTTTCC

Downstream 100 bases:

>100_bases
CATTCATTGCCCTCATTAACCGATTCATTGACCTCATTGCCCTCATTGACACATTCAATCACCTCATTGACACATTTAAT
CATGCAATCAACATGATTAA

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 190; Mature: 190

Protein sequence:

>190_residues
MKRLIIGISGASGAIYGVRLLQVLQHVEGVETHLIISNAARQTLALETDYSVKDVQEFADVVHDFRDIAACISSGSFKTD
GMVILPCSIKTLSGIVHSYTDGLLTRAADVILKERRRLVLCVRETPLHLGHLRLMVQAAELGAVIMPPMLAFYHQPQTIQ
DIIDQTVNRIIDQFDIELPKDLFTRWQGKN

Sequences:

>Translated_190_residues
MKRLIIGISGASGAIYGVRLLQVLQHVEGVETHLIISNAARQTLALETDYSVKDVQEFADVVHDFRDIAACISSGSFKTD
GMVILPCSIKTLSGIVHSYTDGLLTRAADVILKERRRLVLCVRETPLHLGHLRLMVQAAELGAVIMPPMLAFYHQPQTIQ
DIIDQTVNRIIDQFDIELPKDLFTRWQGKN
>Mature_190_residues
MKRLIIGISGASGAIYGVRLLQVLQHVEGVETHLIISNAARQTLALETDYSVKDVQEFADVVHDFRDIAACISSGSFKTD
GMVILPCSIKTLSGIVHSYTDGLLTRAADVILKERRRLVLCVRETPLHLGHLRLMVQAAELGAVIMPPMLAFYHQPQTIQ
DIIDQTVNRIIDQFDIELPKDLFTRWQGKN

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl P-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=188, Percent_Identity=79.2553191489362, Blast_Score=315, Evalue=1e-87,
Organism=Saccharomyces cerevisiae, GI6320746, Length=187, Percent_Identity=47.0588235294118, Blast_Score=186, Evalue=2e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 21189; Mature: 21189

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLIIGISGASGAIYGVRLLQVLQHVEGVETHLIISNAARQTLALETDYSVKDVQEFAD
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHEEECCCCCHHHHHHHHH
VVHDFRDIAACISSGSFKTDGMVILPCSIKTLSGIVHSYTDGLLTRAADVILKERRRLVL
HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEE
CVRETPLHLGHLRLMVQAAELGAVIMPPMLAFYHQPQTIQDIIDQTVNRIIDQFDIELPK
EEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCH
DLFTRWQGKN
HHHHHCCCCC
>Mature Secondary Structure
MKRLIIGISGASGAIYGVRLLQVLQHVEGVETHLIISNAARQTLALETDYSVKDVQEFAD
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHEEEEHHHHHHHEEECCCCCHHHHHHHHH
VVHDFRDIAACISSGSFKTDGMVILPCSIKTLSGIVHSYTDGLLTRAADVILKERRRLVL
HHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEE
CVRETPLHLGHLRLMVQAAELGAVIMPPMLAFYHQPQTIQDIIDQTVNRIIDQFDIELPK
EEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCH
DLFTRWQGKN
HHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]