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The map label for this gene is 108812325

Identifier: 108812325

GI number: 108812325

Start: 2447626

End: 2448288

Strand: Reverse

Name: 108812325

Synonym: YPN_2163

Alternate gene names: NA

Gene position: 2448288-2447626 (Counterclockwise)

Preceding gene: 108812326

Following gene: 108812322

Centisome position: 53.99

GC content: 50.53

Gene sequence:

>663_bases
GTGTTCCTAGCGCTGGGCATCAACACTGAAGGTCAGAAAGAGCTGCTGGGCATGTGGCTGGCAGAAAATGAAGGTGCGAA
GTTCTGGCTAAGTGTGCTGACAGAGCTAAAAAATCGCGGTCTTCAGGACATTCTGATTGCCTGCGTGGATGGCCTGAAGG
GGTTCCCGGATGCGATAAACAGTGTTTATCCGCAGACTCACATCCAGCTGTGCATCATCCATATGGTACGCAACAGCCTG
AAATATGTGTCATGGAAGGACTATAAAGCCGTCACCAGCGGTTTGAAAATGGTGTATCAGGCTCCGACAGAAGAGGCGGC
GCTGATGGCGCTGGATAAGTTTGCGGAGGCCTGGGACGACAAATACCCGCAAATTAGCAAAAGTTGGCGTACGCACTGGG
AAAATCTCAATACATTCTTCGGCTATCCGCCCGATATCCGCAAGGCTATCTACACCACGAATGCCATCGAATCGGTGAAC
AGCGTGATCCGTGCAGCCATTAAAAAGCGCAAAGTGTTCCCGACAGACGACTCAGTGCGGAAGGTTGTTTATTTGGCGAT
CAAGGATGCATCAAAAAAATGGAGTATGCCGATCCAGAACTGGCGGTTAGCGATGAGCCGTTTTATTATCGAGTTCGGTG
ACCGCCTGAGCGATCACCTTTAA

Upstream 100 bases:

>100_bases
GAATGGCAAAACCGCCAACTGGATGCTCTGTATCCCATTGTTTATATGGACTGCATTGTCGTAAAAAGTCCGCCAGAACG
GTAGCGTGATAAACAAAGCA

Downstream 100 bases:

>100_bases
TACGGTGGCAGTTACACAGAATTATGGACAGGCTCTGGCTTTCTTATCGATCATGTTATCCAATGCAACGATTTTGCCAC
CCACTGCTTGAGCAACTAAT

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSL
KYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVN
SVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL

Sequences:

>Translated_220_residues
MFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSL
KYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVN
SVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL
>Mature_220_residues
MFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAINSVYPQTHIQLCIIHMVRNSL
KYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDDKYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVN
SVIRAAIKKRKVFPTDDSVRKVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL

Specific function: Required for the transposition of the insertion element [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase mutator family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001207 [H]

Pfam domain/function: PF00872 Transposase_mut [H]

EC number: NA

Molecular weight: Translated: 25280; Mature: 25280

Theoretical pI: Translated: 9.46; Mature: 9.46

Prosite motif: PS01007 TRANSPOSASE_MUTATOR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAIN
CEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH
SVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDD
HCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
KYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVR
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL
HHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLALGINTEGQKELLGMWLAENEGAKFWLSVLTELKNRGLQDILIACVDGLKGFPDAIN
CEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHH
SVYPQTHIQLCIIHMVRNSLKYVSWKDYKAVTSGLKMVYQAPTEEAALMALDKFAEAWDD
HCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
KYPQISKSWRTHWENLNTFFGYPPDIRKAIYTTNAIESVNSVIRAAIKKRKVFPTDDSVR
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
KVVYLAIKDASKKWSMPIQNWRLAMSRFIIEFGDRLSDHL
HHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1849509; 1327271; 11481430; 11481432 [H]