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The map label for this gene is nuoJ [H]

Identifier: 108812304

GI number: 108812304

Start: 2422073

End: 2422618

Strand: Reverse

Name: nuoJ [H]

Synonym: YPN_2142

Alternate gene names: 108812304

Gene position: 2422618-2422073 (Counterclockwise)

Preceding gene: 108812305

Following gene: 108812303

Centisome position: 53.43

GC content: 51.65

Gene sequence:

>546_bases
ATGGAATTTGCGTTTTATATTGCAGCATTGGTGGCCGTGGTGGCGACGATCCGCGTTATCACTCACACCAACCCGGTACA
TGCGTTGCTGTACCTGATTATCTCTTTGTTGGCTATTTCGGCGGTGTTCTTCTCGTTGGGGGCTTATTTTGCCGGTGCGC
TGGAAATCATCGTTTACGCGGGTGCCATTATGGTGCTGTTCGTGTTTGTGGTGATGATGCTGAACCTGGGCAACGTCGAG
CAACAAGAGCGTGCCTGGCTGAAACCCAGTATGTGGATAGGCCCCGGTTTACTCGCTCTGGTTCTGCTATCAGTACTGAT
CTATGCCATTAGCTCTGTCTCTGATCAGGGTATCAGCGGTGAAATGGTGGATGCCAAAGCCGTTGGGATCAGCTTATTTG
GCCCTTATGTGTTGGCGGTTGAGCTGGCGTCAATGTTGCTGTTGGCCGGTTTAGTGGTGGCGTTCCATATCGGGCGTGAA
CATAAGCCGGGTGACGTGATGGGTGCGAGTGATTCAGCGAAAAGAAAAACGGAGGAACAAGCATGA

Upstream 100 bases:

>100_bases
GATGGCCGGTATGGCGATTGATGGCAAGCAGAAAGGCGAAGCCGAAAATGAAGCCAAACCGATCGACGTTAAAGGTCTGA
TGCCCTAGGAGCCGTTTTCC

Downstream 100 bases:

>100_bases
TCCCTCTACAACATGGCCTGATTCTGGCGGCCATTCTGTTTGTGCTGGGGCTAACGGGGTTGCTGATTCGTCGCAATTTA
CTGTTTATGCTGATAAGCCT

Product: NADH dehydrogenase subunit J

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J; NUO10 [H]

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MEFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGNVE
QQERAWLKPSMWIGPGLLALVLLSVLIYAISSVSDQGISGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGRE
HKPGDVMGASDSAKRKTEEQA

Sequences:

>Translated_181_residues
MEFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGNVE
QQERAWLKPSMWIGPGLLALVLLSVLIYAISSVSDQGISGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGRE
HKPGDVMGASDSAKRKTEEQA
>Mature_181_residues
MEFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYAGAIMVLFVFVVMMLNLGNVE
QQERAWLKPSMWIGPGLLALVLLSVLIYAISSVSDQGISGEMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGRE
HKPGDVMGASDSAKRKTEEQA

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=184, Percent_Identity=76.0869565217391, Blast_Score=276, Evalue=5e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 19340; Mature: 19340

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYA
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIMVLFVFVVMMLNLGNVEQQERAWLKPSMWIGPGLLALVLLSVLIYAISSVSDQGISG
HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
EMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPGDVMGASDSAKRKTEEQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC
A
C
>Mature Secondary Structure
MEFAFYIAALVAVVATIRVITHTNPVHALLYLIISLLAISAVFFSLGAYFAGALEIIVYA
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GAIMVLFVFVVMMLNLGNVEQQERAWLKPSMWIGPGLLALVLLSVLIYAISSVSDQGISG
HHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCC
EMVDAKAVGISLFGPYVLAVELASMLLLAGLVVAFHIGREHKPGDVMGASDSAKRKTEEQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]