Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is nuoN
Identifier: 108812300
GI number: 108812300
Start: 2416891
End: 2418354
Strand: Reverse
Name: nuoN
Synonym: YPN_2138
Alternate gene names: 108812300
Gene position: 2418354-2416891 (Counterclockwise)
Preceding gene: 108812301
Following gene: 108812299
Centisome position: 53.33
GC content: 53.83
Gene sequence:
>1464_bases ATGACAATAACTCCTCAACAACTGATCGCAATGCTACCGCTGTTGATCGTCGGATTGACGGTGGTGGTTGTGATGCTGTC CATTGCGTGGCGACGCGATCATTTTATTAATGCCACACTGACCGTCATTGGGCTTAATCTGGCGCTGCTGTCACTTTACT TTGTTGGACAGGTCGGGCCGATGGATGTCACTCCGCTGATGCGGGTTGACGGCTATTCGATGTTCTACACCGGGCTGGTG ATTATCGCCAGCTTGGCGACCAGCACGTTTGCTTACCCTTGGTTGGTCGGCTACCCGGATAACCGCGAAGAGTTCTATCT GCTGGTGCTGATTGCGGCTTTGGGCGGTATTCTGCTCGCCAGTGCCAATCATCTGGCGTCGCTGTTCTTGGGTATTGAAT TGCTTACTTTGCCGCTGTTTGGTCTGATTGGTTATGCCTATCGCCAGAAGCGTTCACTGGAAGCCAGTATCAAATACATG CTGTTGTCGGCGGCGGCATCGTCATTCCTGCTGTTCGGTATGGCGCTGTTGTATGCTGAGTCCGGTAGCCTGTCCTTCGT AGGGTTGGGCCAGAGCCTAAGTGACTCGATGGTGCACCAACCGCTGATTCTGGCGGGTCTGGGCATGATGATTGTTGGCC TCGGCTTTAAACTGTCGTTGGTACCGTTCCAATTGTGGACACCCGATGTGTATCAGGGCGCACCCGCGCCAGTTTCCACG TTCCTGGCGACCGCCAGCAAGATTGCTATCTTTGCCGTAGTGATGCGCTTGTTTATGTACGCACCGGCGGCGGATAGCGA AGCCGTGCGTTTGGTTCTGTCGATTATTGCGGTGGCCTCGATCCTGTTTGGCAACCTGATGGCGATCAGCCAGACCAACA TCAAACGCCTGTTGGGTTACTCCTCTATTGCCCACCTTGGTTATTTGCTGATTGCATTGGTCGCAGTACAAACACACGAG CTCGCATTACCGCTGGAAACCATCGGGGTGTATCTGGCGGGGTATCTGTTCAGTAGCCTGGGGGCATTTGGCGTCGTTAG CCTGATGTCCAGCCCGTACAAAGGCCCAGATGCAGAATCCCTGTTCTCTTACCGTGGCTTGTTCTGGCATAAGCCTATTC TGTCTGCGGTGATGACAGTGATGATGTTGTCACTGGCCGGTATCCCAATGACACTGGGCTTTATCGGTAAATTCTTTGTG GTGGCAATGGGGGTCAGCGCCAACTTGTGGTGGTTGACTGGCGCGGTGGTGTTAGGCAGTGCCATCGGCTTGTACTATTA TCTGCGCGTTACCGTCAGTTTGTTCCTCAGCCCGCCGCAGAGCTTAGTACGTGATACCCCGAGCAACTGGGCATTAACGG CCGGTGGTGTGGTGGTACTGATCTCCGCGATTTTGGTACTGGTGTTGGGTATCTATCCGCAACCGTTGATAACACTGGTG CAGATGGCTCAGCCCTTGATGTGA
Upstream 100 bases:
>100_bases GCCGATCCTCGACACGTCCCATGCGGCAATGAGTAATGTGCAACAGTGGTTTTCAGCTGCATCTATTCCAGCTCCATCTA TTACAAGGCCATAATTCGCC
Downstream 100 bases:
>100_bases TGATGTGTTAAACCGGCACAGACGAATGATGTCGAGATAGACCCTACCCCCTGTGAGTATCGGCTTACAGGGGGTTTTGT TTTATCTGGGGCTCAGGAGG
Product: NADH dehydrogenase subunit N
Products: NA
Alternate protein names: NADH dehydrogenase I subunit N; NDH-1 subunit N
Number of amino acids: Translated: 487; Mature: 486
Protein sequence:
>487_residues MTITPQQLIAMLPLLIVGLTVVVVMLSIAWRRDHFINATLTVIGLNLALLSLYFVGQVGPMDVTPLMRVDGYSMFYTGLV IIASLATSTFAYPWLVGYPDNREEFYLLVLIAALGGILLASANHLASLFLGIELLTLPLFGLIGYAYRQKRSLEASIKYM LLSAAASSFLLFGMALLYAESGSLSFVGLGQSLSDSMVHQPLILAGLGMMIVGLGFKLSLVPFQLWTPDVYQGAPAPVST FLATASKIAIFAVVMRLFMYAPAADSEAVRLVLSIIAVASILFGNLMAISQTNIKRLLGYSSIAHLGYLLIALVAVQTHE LALPLETIGVYLAGYLFSSLGAFGVVSLMSSPYKGPDAESLFSYRGLFWHKPILSAVMTVMMLSLAGIPMTLGFIGKFFV VAMGVSANLWWLTGAVVLGSAIGLYYYLRVTVSLFLSPPQSLVRDTPSNWALTAGGVVVLISAILVLVLGIYPQPLITLV QMAQPLM
Sequences:
>Translated_487_residues MTITPQQLIAMLPLLIVGLTVVVVMLSIAWRRDHFINATLTVIGLNLALLSLYFVGQVGPMDVTPLMRVDGYSMFYTGLV IIASLATSTFAYPWLVGYPDNREEFYLLVLIAALGGILLASANHLASLFLGIELLTLPLFGLIGYAYRQKRSLEASIKYM LLSAAASSFLLFGMALLYAESGSLSFVGLGQSLSDSMVHQPLILAGLGMMIVGLGFKLSLVPFQLWTPDVYQGAPAPVST FLATASKIAIFAVVMRLFMYAPAADSEAVRLVLSIIAVASILFGNLMAISQTNIKRLLGYSSIAHLGYLLIALVAVQTHE LALPLETIGVYLAGYLFSSLGAFGVVSLMSSPYKGPDAESLFSYRGLFWHKPILSAVMTVMMLSLAGIPMTLGFIGKFFV VAMGVSANLWWLTGAVVLGSAIGLYYYLRVTVSLFLSPPQSLVRDTPSNWALTAGGVVVLISAILVLVLGIYPQPLITLV QMAQPLM >Mature_486_residues TITPQQLIAMLPLLIVGLTVVVVMLSIAWRRDHFINATLTVIGLNLALLSLYFVGQVGPMDVTPLMRVDGYSMFYTGLVI IASLATSTFAYPWLVGYPDNREEFYLLVLIAALGGILLASANHLASLFLGIELLTLPLFGLIGYAYRQKRSLEASIKYML LSAAASSFLLFGMALLYAESGSLSFVGLGQSLSDSMVHQPLILAGLGMMIVGLGFKLSLVPFQLWTPDVYQGAPAPVSTF LATASKIAIFAVVMRLFMYAPAADSEAVRLVLSIIAVASILFGNLMAISQTNIKRLLGYSSIAHLGYLLIALVAVQTHEL ALPLETIGVYLAGYLFSSLGAFGVVSLMSSPYKGPDAESLFSYRGLFWHKPILSAVMTVMMLSLAGIPMTLGFIGKFFVV AMGVSANLWWLTGAVVLGSAIGLYYYLRVTVSLFLSPPQSLVRDTPSNWALTAGGVVVLISAILVLVLGIYPQPLITLVQ MAQPLM
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1007
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 2 (chain N)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 2 family
Homologues:
Organism=Homo sapiens, GI251831108, Length=325, Percent_Identity=22.1538461538462, Blast_Score=69, Evalue=9e-12, Organism=Escherichia coli, GI145693160, Length=487, Percent_Identity=80.2874743326489, Blast_Score=789, Evalue=0.0, Organism=Escherichia coli, GI1788831, Length=391, Percent_Identity=25.0639386189258, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1788829, Length=322, Percent_Identity=26.0869565217391, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788614, Length=362, Percent_Identity=25.9668508287293, Blast_Score=76, Evalue=6e-15, Organism=Escherichia coli, GI1788613, Length=312, Percent_Identity=25.9615384615385, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788827, Length=361, Percent_Identity=25.4847645429363, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NUON_YERP3 (A7FGR6)
Other databases:
- EMBL: CP000720 - RefSeq: YP_001400444.1 - ProteinModelPortal: A7FGR6 - STRING: A7FGR6 - GeneID: 5387472 - GenomeReviews: CP000720_GR - KEGG: ypi:YpsIP31758_1466 - eggNOG: COG1007 - HOGENOM: HBG747830 - OMA: ILSISYN - ProtClustDB: PRK05777 - BioCyc: YPSE349747:YPSIP31758_1466-MONOMER - GO: GO:0006810 - HAMAP: MF_00445 - InterPro: IPR010096 - InterPro: IPR001750 - TIGRFAMs: TIGR01770
Pfam domain/function: PF00361 Oxidored_q1
EC number: =1.6.99.5
Molecular weight: Translated: 52348; Mature: 52216
Theoretical pI: Translated: 8.89; Mature: 8.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1131f320)-; HASH(0x118fb3bc)-; HASH(0x118617a4)-; HASH(0x10f7c5a4)-; HASH(0xf876d80)-; HASH(0x11103e50)-; HASH(0x114aa764)-; HASH(0x114aa7e8)-; HASH(0x104cdd40)-; HASH(0x11986db8)-; HASH(0xf1ec760)-; HASH(0x10d762a8)-; HASH(0x11800be8)-; HASH(0x10c0ca00)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTITPQQLIAMLPLLIVGLTVVVVMLSIAWRRDHFINATLTVIGLNLALLSLYFVGQVGP CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC MDVTPLMRVDGYSMFYTGLVIIASLATSTFAYPWLVGYPDNREEFYLLVLIAALGGILLA CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHH SANHLASLFLGIELLTLPLFGLIGYAYRQKRSLEASIKYMLLSAAASSFLLFGMALLYAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SGSLSFVGLGQSLSDSMVHQPLILAGLGMMIVGLGFKLSLVPFQLWTPDVYQGAPAPVST CCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHCCCCCHHHH FLATASKIAIFAVVMRLFMYAPAADSEAVRLVLSIIAVASILFGNLMAISQTNIKRLLGY HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSIAHLGYLLIALVAVQTHELALPLETIGVYLAGYLFSSLGAFGVVSLMSSPYKGPDAES HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LFSYRGLFWHKPILSAVMTVMMLSLAGIPMTLGFIGKFFVVAMGVSANLWWLTGAVVLGS HHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AIGLYYYLRVTVSLFLSPPQSLVRDTPSNWALTAGGVVVLISAILVLVLGIYPQPLITLV HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHH QMAQPLM HHHCCCH >Mature Secondary Structure TITPQQLIAMLPLLIVGLTVVVVMLSIAWRRDHFINATLTVIGLNLALLSLYFVGQVGP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC MDVTPLMRVDGYSMFYTGLVIIASLATSTFAYPWLVGYPDNREEFYLLVLIAALGGILLA CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHH SANHLASLFLGIELLTLPLFGLIGYAYRQKRSLEASIKYMLLSAAASSFLLFGMALLYAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SGSLSFVGLGQSLSDSMVHQPLILAGLGMMIVGLGFKLSLVPFQLWTPDVYQGAPAPVST CCCEEEEECCCHHHHHHHHCHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHCCCCCHHHH FLATASKIAIFAVVMRLFMYAPAADSEAVRLVLSIIAVASILFGNLMAISQTNIKRLLGY HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSIAHLGYLLIALVAVQTHELALPLETIGVYLAGYLFSSLGAFGVVSLMSSPYKGPDAES HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH LFSYRGLFWHKPILSAVMTVMMLSLAGIPMTLGFIGKFFVVAMGVSANLWWLTGAVVLGS HHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AIGLYYYLRVTVSLFLSPPQSLVRDTPSNWALTAGGVVVLISAILVLVLGIYPQPLITLV HHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHH QMAQPLM HHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA