Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812228

Identifier: 108812228

GI number: 108812228

Start: 2335133

End: 2336254

Strand: Reverse

Name: 108812228

Synonym: YPN_2066

Alternate gene names: NA

Gene position: 2336254-2335133 (Counterclockwise)

Preceding gene: 108812229

Following gene: 108812227

Centisome position: 51.52

GC content: 42.96

Gene sequence:

>1122_bases
ATGCATATGAAACATAAAAAATATTTACCCCTGTTTCTGATGGCAGGTATCTGTTCTGTTGCTCAAGCGGATAATTCTCC
GGATGTGGTAAGCGCTAATAACATGGATAACCGGACTTTTTTTGCCGGTGACAAAATCAGAATAGTAAAAGATGGTGGTG
AGACGATAGAAGCTGTCGTAGAACTCAGCGATGATAATATTGGGATTGTGCGCATCCCTAAGGATGAAAAAGCCTATTTC
CATGGCAACTGGTTGGCAGAATATAAAATAGAACATTTCCGCAATGAGGGGCGCAGTACTAACTCTCGGCCAGTGCATGA
AATTGTCTTTGCTGATGGGCGCGTCAATTTTGGCGATACGGGCTGGAATACCGGTTTTTTACTCAAGCAGGTACGGTTTA
CCAGCGACTCACGTAATGAGAGCAATCATAAAGTTGATTTCCGCATGGTAGAAATGGAAATCCGCCCCGCCTGGTCGAAA
AGTATCGACAAGCACTGGTTTATGTTCGAAGGGATCTATTTAGGTAAAACAGGCTACGAAAAAAACCGCACGACAGGCGG
CGATAACAATATTGGCGGCGATGGTTATGGTTTTCGGCCCTATTACCGCTACCAGGTATCAGATCGCTTAAGTGTCAATA
CTGATGTAAAAATGCTGGTAGAAGATAAAGATGCCCGTGGTGCAGATAATGGACGGTTCCAGTTCTACGAAGCACTTGTT
AATGTAAATTATCGGGTCGCCGATAATGTGCACGTCGGTATCGAGGTGTTCCGTAAAGAAGGCCAGGACTTTAATCATAA
TGGCACCAAAACAGCAAACGTCTTGGAACAGGAACTTCGCCCTTGGGTTGCCTGGAACATGGGTAAAAATAACTTCCTGT
TTAAAATGGAACCACAATTAAGACGTATCGGCGGGCAAGATGGTTATAGAGAAACCTCGAAAGCTCAAAAATATATTTTT
AACTATAGCTATCCTATCGCCGATAGAGTCTATTTGGTTGCCGAATATTTCTACCGGGTAGAGCATGACAAAAAATTCTG
GGATCGTGGCGTACGCGACAATAAAAGCTACAGTGATACCACCACGCATTTTGGCAAGTTAGGAATTAATTATATTTTTT
AA

Upstream 100 bases:

>100_bases
ATTGCGTTTTTAACTCGATTTATAGAAAAAACCTAATATCAATTAGATTGGGTGGAGTTCCCATTATTTATCGATTGGGA
ATACCACCTACTTACATGGA

Downstream 100 bases:

>100_bases
GCGGCTATAAATAACTAACTTAGAATAAGAGAAATAATATGAAACTACTAAATACCCTGGTTTGTATCATTGGTTTAACA
TCATTTTCTTCCTCTGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MHMKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVELSDDNIGIVRIPKDEKAYF
HGNWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSK
SIDKHWFMFEGIYLGKTGYEKNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALV
NVNYRVADNVHVGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRRIGGQDGYRETSKAQKYIF
NYSYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTTHFGKLGINYIF

Sequences:

>Translated_373_residues
MHMKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVELSDDNIGIVRIPKDEKAYF
HGNWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSK
SIDKHWFMFEGIYLGKTGYEKNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALV
NVNYRVADNVHVGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRRIGGQDGYRETSKAQKYIF
NYSYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTTHFGKLGINYIF
>Mature_373_residues
MHMKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVVELSDDNIGIVRIPKDEKAYF
HGNWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDTGWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSK
SIDKHWFMFEGIYLGKTGYEKNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALV
NVNYRVADNVHVGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQLRRIGGQDGYRETSKAQKYIF
NYSYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDTTTHFGKLGINYIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43342; Mature: 43342

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVV
CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCEEEEEECCCCEEEEEE
ELSDDNIGIVRIPKDEKAYFHGNWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDT
EECCCCEEEEEECCCCCEEEECCCCEEHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCC
GWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSIDKHWFMFEGIYLGKTGYE
CCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCHHCCCCCCEEEEEEEEECCCCCC
KNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALV
CCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCEEEEEECCCCCCCCCCCCEEEEHHH
NVNYRVADNVHVGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQL
CCCEEEECCEEEHHHHEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECHHH
RRIGGQDGYRETSKAQKYIFNYSYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDT
HHCCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCH
TTHFGKLGINYIF
HHHHHHCCEEECC
>Mature Secondary Structure
MHMKHKKYLPLFLMAGICSVAQADNSPDVVSANNMDNRTFFAGDKIRIVKDGGETIEAVV
CCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCEEEEEECCCCEEEEEE
ELSDDNIGIVRIPKDEKAYFHGNWLAEYKIEHFRNEGRSTNSRPVHEIVFADGRVNFGDT
EECCCCEEEEEECCCCCEEEECCCCEEHHHHHHHCCCCCCCCCCCEEEEEECCEEECCCC
GWNTGFLLKQVRFTSDSRNESNHKVDFRMVEMEIRPAWSKSIDKHWFMFEGIYLGKTGYE
CCCCCCEEEEEEECCCCCCCCCCEEEEEEEEEEECCCHHCCCCCCEEEEEEEEECCCCCC
KNRTTGGDNNIGGDGYGFRPYYRYQVSDRLSVNTDVKMLVEDKDARGADNGRFQFYEALV
CCCCCCCCCCCCCCCCCCCCEEEEEECCCEECCCCEEEEEECCCCCCCCCCCCEEEEHHH
NVNYRVADNVHVGIEVFRKEGQDFNHNGTKTANVLEQELRPWVAWNMGKNNFLFKMEPQL
CCCEEEECCEEEHHHHEECCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEEEEECHHH
RRIGGQDGYRETSKAQKYIFNYSYPIADRVYLVAEYFYRVEHDKKFWDRGVRDNKSYSDT
HHCCCCCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCH
TTHFGKLGINYIF
HHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA