Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108812213

Identifier: 108812213

GI number: 108812213

Start: 2315284

End: 2315961

Strand: Reverse

Name: 108812213

Synonym: YPN_2051

Alternate gene names: NA

Gene position: 2315961-2315284 (Counterclockwise)

Preceding gene: 108812215

Following gene: 108812212

Centisome position: 51.07

GC content: 44.4

Gene sequence:

>678_bases
GTGGACCGCAGTCCTTCTCTTTTTACGAGTAAAAAGTTTGTCTTCTTCGGTGCAACCTTCTGTTGTCTACTTTGGGGGAG
TGCCTATCCGGCAATAAAAAATGGCTATCAATTGTTTAATATTTCGCCTGATGATATTCCCAGTAAGATGGTGTTTGCTG
GATATCGTTTTTTATTAGCCGGATTAGTATTGCTGCTTTTTGCGCTCGCCAGTGGTAAGGCAATAGGGCGTCTTAAAAAG
GGACAATATCAGCAAATTGCTATTTTGGGATTAACCCAAACGGCGTTGCAGTATGTGTTTTTTTATATCGGTTTGGCTTA
CACCACTGGAGTGAAAGGTTCAATCATGAATGCGACGGGGACATTCTTCAGTGTCCTGCTAGCACATTACCTCTATAAAA
ATGACCGGTTAACGTTGAATAAAATTATTGGCTGCGCTCTGGGTTTTGTGGGGGTGATGGTGGTCAACGTGGGTTCAGAT
TTAATGGACTTCAATTTTTCGCTGCTCGGAGAGGGCTCGGTAGTATTAGCCGCATTTATTCTCTCCGCGGCCAGTATTTA
CGGTAAGCGCATTTCGCAGACGATGGATACCACGGTGATGACCGGCTATCAGTTAGCGATTGGTGGGTTGGTGTTAACCC
TTGGGGGCTATCTATTTGTATTTGGTCTTGGTCAGTAG

Upstream 100 bases:

>100_bases
AGCGGCTTTTTAAGCAAAAAGTGACATCAAACAGGACTTTTCAGTAAGAAGTAGCTATAACGAAACATCATTTCATTTTT
TGATTGTAAAGGATGTTCAT

Downstream 100 bases:

>100_bases
ACTATTTGGCGCATTCCTCCTTGTTGTAATGCCGCCGTGAGTGGTGCGGTAGCCAGCGGTTTTGATAAGAAGTCTACTGT
GGCTCACTTTCTCTGTTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Exported Membrane Protein; Permease; Integral Membrane; Drug/Metabolite Exporter Family Transporter; Transporter EamA Family

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MDRSPSLFTSKKFVFFGATFCCLLWGSAYPAIKNGYQLFNISPDDIPSKMVFAGYRFLLAGLVLLLFALASGKAIGRLKK
GQYQQIAILGLTQTALQYVFFYIGLAYTTGVKGSIMNATGTFFSVLLAHYLYKNDRLTLNKIIGCALGFVGVMVVNVGSD
LMDFNFSLLGEGSVVLAAFILSAASIYGKRISQTMDTTVMTGYQLAIGGLVLTLGGYLFVFGLGQ

Sequences:

>Translated_225_residues
MDRSPSLFTSKKFVFFGATFCCLLWGSAYPAIKNGYQLFNISPDDIPSKMVFAGYRFLLAGLVLLLFALASGKAIGRLKK
GQYQQIAILGLTQTALQYVFFYIGLAYTTGVKGSIMNATGTFFSVLLAHYLYKNDRLTLNKIIGCALGFVGVMVVNVGSD
LMDFNFSLLGEGSVVLAAFILSAASIYGKRISQTMDTTVMTGYQLAIGGLVLTLGGYLFVFGLGQ
>Mature_225_residues
MDRSPSLFTSKKFVFFGATFCCLLWGSAYPAIKNGYQLFNISPDDIPSKMVFAGYRFLLAGLVLLLFALASGKAIGRLKK
GQYQQIAILGLTQTALQYVFFYIGLAYTTGVKGSIMNATGTFFSVLLAHYLYKNDRLTLNKIIGCALGFVGVMVVNVGSD
LMDFNFSLLGEGSVVLAAFILSAASIYGKRISQTMDTTVMTGYQLAIGGLVLTLGGYLFVFGLGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24307; Mature: 24307

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRSPSLFTSKKFVFFGATFCCLLWGSAYPAIKNGYQLFNISPDDIPSKMVFAGYRFLLA
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCHHHHHHHHHHHHH
GLVLLLFALASGKAIGRLKKGQYQQIAILGLTQTALQYVFFYIGLAYTTGVKGSIMNATG
HHHHHHHHHHCCHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEECCHH
TFFSVLLAHYLYKNDRLTLNKIIGCALGFVGVMVVNVGSDLMDFNFSLLGEGSVVLAAFI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEECCCHHHHHHHH
LSAASIYGKRISQTMDTTVMTGYQLAIGGLVLTLGGYLFVFGLGQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure
MDRSPSLFTSKKFVFFGATFCCLLWGSAYPAIKNGYQLFNISPDDIPSKMVFAGYRFLLA
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCEEEEECCCCCCCHHHHHHHHHHHHH
GLVLLLFALASGKAIGRLKKGQYQQIAILGLTQTALQYVFFYIGLAYTTGVKGSIMNATG
HHHHHHHHHHCCHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCEECCHH
TFFSVLLAHYLYKNDRLTLNKIIGCALGFVGVMVVNVGSDLMDFNFSLLGEGSVVLAAFI
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHEECCCHHHHHHHH
LSAASIYGKRISQTMDTTVMTGYQLAIGGLVLTLGGYLFVFGLGQ
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA