| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
Click here to switch to the map view.
The map label for this gene is 108812211
Identifier: 108812211
GI number: 108812211
Start: 2314592
End: 2314996
Strand: Reverse
Name: 108812211
Synonym: YPN_2049
Alternate gene names: NA
Gene position: 2314996-2314592 (Counterclockwise)
Preceding gene: 108812212
Following gene: 108812210
Centisome position: 51.05
GC content: 46.17
Gene sequence:
>405_bases TTGCACAATACCCTATCTAACAAGGCGGGTGGCAGGGATAGATTGAGCTGGATATTGATATCCGTGTGCCGTAGCAGTGC GGTTGATCATCCTGTTTACGTTGTCTCTCTGTTTCAGATCGAGCCACTGAGGTTTGTTAGCAGCCTGAACACCTTACTTA CTACAAGGGATTTATTGTTTGGGTATCGGCACTTTCCGATGTATAAATTATCATCATTAATATTTATCAGAGGCTGGACA ATGCAGGCAGCAAAACTCAGTGCAGGTTTATTGGCAACGGGTGGCATTTTGGGTTACGGGGGAGCCTATTGGCAGATGGC GTCTTTGCTGATAGTTGCGGGGATCGCTTTGTTGGCCGGCCTCATTACCTCTGGTTTTACTGATCACGATTATCGTTGCA AGTAA
Upstream 100 bases:
>100_bases CCATCCATTAGCGTCATACGAATATCCAGTAATAGGATGTCCGCTTGAGGTAAATCAGCCTGTTTGATCGGCGCGTGCTT GCAAACGGTTAGCAAAGCGG
Downstream 100 bases:
>100_bases CAGGCCGATGATGATTTACGTATCATGTCGTTGCCCATAAATGGGGCCACAAGGTAAGTCATCACATTTACACTAACTAA ATACATTCACATTAACCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MHNTLSNKAGGRDRLSWILISVCRSSAVDHPVYVVSLFQIEPLRFVSSLNTLLTTRDLLFGYRHFPMYKLSSLIFIRGWT MQAAKLSAGLLATGGILGYGGAYWQMASLLIVAGIALLAGLITSGFTDHDYRCK
Sequences:
>Translated_134_residues MHNTLSNKAGGRDRLSWILISVCRSSAVDHPVYVVSLFQIEPLRFVSSLNTLLTTRDLLFGYRHFPMYKLSSLIFIRGWT MQAAKLSAGLLATGGILGYGGAYWQMASLLIVAGIALLAGLITSGFTDHDYRCK >Mature_134_residues MHNTLSNKAGGRDRLSWILISVCRSSAVDHPVYVVSLFQIEPLRFVSSLNTLLTTRDLLFGYRHFPMYKLSSLIFIRGWT MQAAKLSAGLLATGGILGYGGAYWQMASLLIVAGIALLAGLITSGFTDHDYRCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14757; Mature: 14757
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHNTLSNKAGGRDRLSWILISVCRSSAVDHPVYVVSLFQIEPLRFVSSLNTLLTTRDLLF CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHH GYRHFPMYKLSSLIFIRGWTMQAAKLSAGLLATGGILGYGGAYWQMASLLIVAGIALLAG HHHHCCHHHHHHHHEEECCCCHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LITSGFTDHDYRCK HHHCCCCCCCCCCC >Mature Secondary Structure MHNTLSNKAGGRDRLSWILISVCRSSAVDHPVYVVSLFQIEPLRFVSSLNTLLTTRDLLF CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHHHHHHHHH GYRHFPMYKLSSLIFIRGWTMQAAKLSAGLLATGGILGYGGAYWQMASLLIVAGIALLAG HHHHCCHHHHHHHHEEECCCCHHHHHHCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH LITSGFTDHDYRCK HHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA