| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is yceG [H]
Identifier: 108812187
GI number: 108812187
Start: 2287938
End: 2288963
Strand: Reverse
Name: yceG [H]
Synonym: YPN_2025
Alternate gene names: 108812187
Gene position: 2288963-2287938 (Counterclockwise)
Preceding gene: 108812188
Following gene: 108812186
Centisome position: 50.48
GC content: 46.3
Gene sequence:
>1026_bases ATGAAAAGAAAAAGCACCAAAGCACTGATCCTTTTTGTTGTGATCTGTTTGGGATTACTGCTGTTGGGTTATCAAAAAGT ACAAGATTTTGCGCGTCAGCCCTTGGCGATTAAGCAAGAGACTTACTTTACCTTACCGGCAGGTACCGGGCGGGTTGCTC TAGAGAATTTATTGCTACGTGATCATGTGATTGCTAATACAGGTTTATTTCCCTGGCTACTGCGCATAGAACCCGAACTG GCTAATTTTAAGGCTGGGACATATCGTTTTACGCCGGGTATGACGGTACGTGAGATGCTGGAGTTGTTGGTCAGTGGTAA AGAAGCCCAGTTTACCGTTCGTTTTATTGAAGGTAAGCGCCTGCGTGATTGGCTGGATGAATTACAACAGTCAAAATATA TCAAACATGTGCTGGAAGGGAAAACAGATGCTGAAATTGCGCAGTTACTGGGGTTAAAAGAGAGTGAACACCCCGAAGGC TGGCTCTATCCTGATACCTACTCCTATACCGCAGGTACAACGGATTTAACACTGCTCAAACGTGCCCATCAACGAATGGA GGAAACCGTTGCAGAAATCTGGCAGGGGCGTGATGACGGATTGCCGTATAAGACCCCAAGTGATTTGGTTACTATGGCAT CAATCATTGAAAAAGAAACCGCGGTAAATGAGGAGCGGGATAAGGTGGCTTCTGTCTTCATTAACCGTTTACGTCTTGGT ATGCGCCTACAAACGGATCCAACAGTGATTTATGGTATGGGCGAAAAGTATAACGGCAACATTACTCGTAAAGACTTAGA TACCCCGACACCTTATAATACCTATGTTATTTCCGGTTTGCCGCCAACCCCCATTGCCATGCCAGGGTTGGCATCGCTGA CCGCTGCTGCCCATCCGGCCCAAACGCCCTATCTCTATTTTGTCGCAGACGGCAAGGGCGGGCATACATTCACCACTAAT TTAGCCAGTCATAATCAAGCCGTGCGTGTTTATCGCCAGTCGCTAAAGGATAAAAATGAACAGTAA
Upstream 100 bases:
>100_bases GTCAGCAGTCTGATTAATTGTTATATAATCACGCTTGTTTTTAGAACGCCGCCACATTCAATTTAAAACCGCCACATTCA AATTTAAAAATGGCCACCCG
Downstream 100 bases:
>100_bases ATTTATCGTTATTGAAGGGCTTGAAGGGGCAGGGAAAACCACCACCCGCGACACCGTGGTCGCGGTGCTGCGGGCCCAAG GGATTAACGATATCGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 341
Protein sequence:
>341_residues MKRKSTKALILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPAGTGRVALENLLLRDHVIANTGLFPWLLRIEPEL ANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKRLRDWLDELQQSKYIKHVLEGKTDAEIAQLLGLKESEHPEG WLYPDTYSYTAGTTDLTLLKRAHQRMEETVAEIWQGRDDGLPYKTPSDLVTMASIIEKETAVNEERDKVASVFINRLRLG MRLQTDPTVIYGMGEKYNGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPAQTPYLYFVADGKGGHTFTTN LASHNQAVRVYRQSLKDKNEQ
Sequences:
>Translated_341_residues MKRKSTKALILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPAGTGRVALENLLLRDHVIANTGLFPWLLRIEPEL ANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKRLRDWLDELQQSKYIKHVLEGKTDAEIAQLLGLKESEHPEG WLYPDTYSYTAGTTDLTLLKRAHQRMEETVAEIWQGRDDGLPYKTPSDLVTMASIIEKETAVNEERDKVASVFINRLRLG MRLQTDPTVIYGMGEKYNGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPAQTPYLYFVADGKGGHTFTTN LASHNQAVRVYRQSLKDKNEQ >Mature_341_residues MKRKSTKALILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPAGTGRVALENLLLRDHVIANTGLFPWLLRIEPEL ANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKRLRDWLDELQQSKYIKHVLEGKTDAEIAQLLGLKESEHPEG WLYPDTYSYTAGTTDLTLLKRAHQRMEETVAEIWQGRDDGLPYKTPSDLVTMASIIEKETAVNEERDKVASVFINRLRLG MRLQTDPTVIYGMGEKYNGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPAQTPYLYFVADGKGGHTFTTN LASHNQAVRVYRQSLKDKNEQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=320, Percent_Identity=65, Blast_Score=423, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38451; Mature: 38451
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKSTKALILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPAGTGRVALENLLLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCHHHHHHHHHH DHVIANTGLFPWLLRIEPELANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKR HHHHHCCCCCCEEEEECCHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCH LRDWLDELQQSKYIKHVLEGKTDAEIAQLLGLKESEHPEGWLYPDTYSYTAGTTDLTLLK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RAHQRMEETVAEIWQGRDDGLPYKTPSDLVTMASIIEKETAVNEERDKVASVFINRLRLG HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC MRLQTDPTVIYGMGEKYNGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPA EEECCCCEEEEECCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCC QTPYLYFVADGKGGHTFTTNLASHNQAVRVYRQSLKDKNEQ CCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKRKSTKALILFVVICLGLLLLGYQKVQDFARQPLAIKQETYFTLPAGTGRVALENLLLR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCHHHHHHHHHH DHVIANTGLFPWLLRIEPELANFKAGTYRFTPGMTVREMLELLVSGKEAQFTVRFIEGKR HHHHHCCCCCCEEEEECCHHHCCCCCCEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCH LRDWLDELQQSKYIKHVLEGKTDAEIAQLLGLKESEHPEGWLYPDTYSYTAGTTDLTLLK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH RAHQRMEETVAEIWQGRDDGLPYKTPSDLVTMASIIEKETAVNEERDKVASVFINRLRLG HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHC MRLQTDPTVIYGMGEKYNGNITRKDLDTPTPYNTYVISGLPPTPIAMPGLASLTAAAHPA EEECCCCEEEEECCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCC QTPYLYFVADGKGGHTFTTNLASHNQAVRVYRQSLKDKNEQ CCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503; 1644759; 8631667 [H]