| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is ptsG [H]
Identifier: 108812183
GI number: 108812183
Start: 2283725
End: 2285158
Strand: Reverse
Name: ptsG [H]
Synonym: YPN_2021
Alternate gene names: 108812183
Gene position: 2285158-2283725 (Counterclockwise)
Preceding gene: 108812184
Following gene: 108812182
Centisome position: 50.39
GC content: 48.33
Gene sequence:
>1434_bases ATGTTTAAGAACGCATTTGCAAACCTGCAAAAGGTAGGTAAATCGCTAATGCTACCGGTATCCGTGTTGCCCATCGCAGG TATTCTGCTGGGTGTCGGTTCCGCGAATTTTAGCTGGCTACCGTCGGTAGTCTCTCACGTAATGGCAGAAGCCGGTGGTT CCGTCTTTGCTAACATGCCATTGATTTTTGCTATTGGTGTTGCGCTTGGCTTTACCAACAACGACGGTGTATCTGCGTTG GCGGCGGTTGTGGCTTACGGCATCATGGTAAAAACCATGGCGGTAGTCGCACCTCTGGTCTTGCATCTGCCAGCAGAAGA AATTGCGACTAAGCATTTAGCTGATACCGGGGTATTGGGCGGGATTATTGCCGGTTCGGTTGCCGCCTATATGTTTAACC GTTTCTACCGTATTCAGTTACCAGAATATTTGGGCTTCTTTGCGGGCAAACGTTTTGTGCCGATTATCTCCGGGTTTACC GCGATTTTCTTAGGCATACTGCTGTCCTTCATCTGGCCACCTATCGGCAAAGCTATCCAAATTTTCTCCGAGTGGGCGGC TTATCAGAACTCGGTCGTCGCTTTTGGTATTTACGGCGTTGTTGAACGTTCATTGGTACCATTCGGTCTGCACCATATCT GGAACGTGCCATTCCAAATGCAAATTGGTGAGTACACCAACGCAGCGGGTCAGGTATTCAACGGTGATATCCCACGTTAT ATGGTGGGTGACCCAACAGCGGGTAAGTTATCGGGGGGTTTCCTGTTTAAAATGTACGGTCTGCCAGCGGCAGCCATTGC GATTTGGCATTCAGCCAAACCAGAAAACCGTGCAAAAGTGGGCGGGATCATGATCTCGGCAGCACTGACATCATTCCTGA CCGGTATTACCGAGCCAATCGAATTCTCCTTTATGTTCGTGGCACCAATTTTGTATTTTATCCATGCAATCTTGGCAGGT TTGGCCTTCCCAATCTGTATTCTGTTAGGGATGCGTGATGGGACCAGTTTCTCTCATGGCTTGATTGATTTTGTTGTCCT GAGCGGTAACAGCAGCCGTATCTGGTTGTTCCCTCTGGTAGGTATCTGCTACGGTCTGGTGTATTACACCATCTTCCGTG TATTGATTACTAAACTGAATTTGAAAACACCGGGACGTGAAGATTCGTCTACTGAGCAATCAGTACAGGGTGGCACAGAA ATGTCAGCCGCTCTGGTTGAAGCATTTGGTGGTAAAGACAACATTACTAACCTGGATGCTTGTATCACTCGCCTTCGTGT TAGCGTGGCAGATGTGTCCAAGGTTGATCAGGCTGGGCTGAAGAAGTTAGGTGCTGCGGGTGTTGTTGTGGCAGGCTCTG GTGTTCAGGCTATCTTCGGTACCAAATCTGACAACCTGAAAACTGATATGGACGAATACATTCGTAACCATTAA
Upstream 100 bases:
>100_bases CTTAGACACCCTTATTCGCAAAGGCATACTCCCCCCTTTGTAATGCCCATAACGCGAAAAACAGCAAGAAAAGCACTATT ACTCAGGAGCACGCTCAACT
Downstream 100 bases:
>100_bases TTCAGGTTAGGGGAGAGCAAAAGGGAGGCGAAAGCCTCCCTTTATTGTGCCCAGAAAACCCCCAGCTATGCTGGGGGTTC AGTAAAGCTTTCAGCTTTGG
Product: PTS system glucose-specific transporter subunits IIBC
Products: NA
Alternate protein names: EIICB-Glc; EII-Glc; Glucose permease IIC component; PTS system glucose-specific EIIC component; Glucose-specific phosphotransferase enzyme IIB component; PTS system glucose-specific EIIB component [H]
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPSVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSAL AAVVAYGIMVKTMAVVAPLVLHLPAEEIATKHLADTGVLGGIIAGSVAAYMFNRFYRIQLPEYLGFFAGKRFVPIISGFT AIFLGILLSFIWPPIGKAIQIFSEWAAYQNSVVAFGIYGVVERSLVPFGLHHIWNVPFQMQIGEYTNAAGQVFNGDIPRY MVGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYFIHAILAG LAFPICILLGMRDGTSFSHGLIDFVVLSGNSSRIWLFPLVGICYGLVYYTIFRVLITKLNLKTPGREDSSTEQSVQGGTE MSAALVEAFGGKDNITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTDMDEYIRNH
Sequences:
>Translated_477_residues MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPSVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSAL AAVVAYGIMVKTMAVVAPLVLHLPAEEIATKHLADTGVLGGIIAGSVAAYMFNRFYRIQLPEYLGFFAGKRFVPIISGFT AIFLGILLSFIWPPIGKAIQIFSEWAAYQNSVVAFGIYGVVERSLVPFGLHHIWNVPFQMQIGEYTNAAGQVFNGDIPRY MVGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYFIHAILAG LAFPICILLGMRDGTSFSHGLIDFVVLSGNSSRIWLFPLVGICYGLVYYTIFRVLITKLNLKTPGREDSSTEQSVQGGTE MSAALVEAFGGKDNITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTDMDEYIRNH >Mature_477_residues MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPSVVSHVMAEAGGSVFANMPLIFAIGVALGFTNNDGVSAL AAVVAYGIMVKTMAVVAPLVLHLPAEEIATKHLADTGVLGGIIAGSVAAYMFNRFYRIQLPEYLGFFAGKRFVPIISGFT AIFLGILLSFIWPPIGKAIQIFSEWAAYQNSVVAFGIYGVVERSLVPFGLHHIWNVPFQMQIGEYTNAAGQVFNGDIPRY MVGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPIEFSFMFVAPILYFIHAILAG LAFPICILLGMRDGTSFSHGLIDFVVLSGNSSRIWLFPLVGICYGLVYYTIFRVLITKLNLKTPGREDSSTEQSVQGGTE MSAALVEAFGGKDNITNLDACITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTDMDEYIRNH
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787343, Length=477, Percent_Identity=90.356394129979, Blast_Score=883, Evalue=0.0, Organism=Escherichia coli, GI1786894, Length=486, Percent_Identity=39.917695473251, Blast_Score=330, Evalue=2e-91, Organism=Escherichia coli, GI1787908, Length=512, Percent_Identity=37.5, Blast_Score=274, Evalue=8e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR004719 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 - InterPro: IPR011535 - InterPro: IPR011299 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 50926; Mature: 50926
Theoretical pI: Translated: 8.69; Mature: 8.69
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPSVVSHVMAEAGGSVFANMP CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCH LIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIATKHLADTGVLG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GIIAGSVAAYMFNRFYRIQLPEYLGFFAGKRFVPIISGFTAIFLGILLSFIWPPIGKAIQ HHHHHHHHHHHHHHHHEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH IFSEWAAYQNSVVAFGIYGVVERSLVPFGLHHIWNVPFQMQIGEYTNAAGQVFNGDIPRY HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCE MVGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPI EECCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH EFSFMFVAPILYFIHAILAGLAFPICILLGMRDGTSFSHGLIDFVVLSGNSSRIWLFPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEHHHHH GICYGLVYYTIFRVLITKLNLKTPGREDSSTEQSVQGGTEMSAALVEAFGGKDNITNLDA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHH CITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTDMDEYIRNH HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCHHHHHHCC >Mature Secondary Structure MFKNAFANLQKVGKSLMLPVSVLPIAGILLGVGSANFSWLPSVVSHVMAEAGGSVFANMP CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEECCH LIFAIGVALGFTNNDGVSALAAVVAYGIMVKTMAVVAPLVLHLPAEEIATKHLADTGVLG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH GIIAGSVAAYMFNRFYRIQLPEYLGFFAGKRFVPIISGFTAIFLGILLSFIWPPIGKAIQ HHHHHHHHHHHHHHHHEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHH IFSEWAAYQNSVVAFGIYGVVERSLVPFGLHHIWNVPFQMQIGEYTNAAGQVFNGDIPRY HHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCE MVGDPTAGKLSGGFLFKMYGLPAAAIAIWHSAKPENRAKVGGIMISAALTSFLTGITEPI EECCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCH EFSFMFVAPILYFIHAILAGLAFPICILLGMRDGTSFSHGLIDFVVLSGNSSRIWLFPLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCEEEHHHHH GICYGLVYYTIFRVLITKLNLKTPGREDSSTEQSVQGGTEMSAALVEAFGGKDNITNLDA HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCCHHHH CITRLRVSVADVSKVDQAGLKKLGAAGVVVAGSGVQAIFGTKSDNLKTDMDEYIRNH HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]