Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108811416

Identifier: 108811416

GI number: 108811416

Start: 1426880

End: 1427137

Strand: Reverse

Name: 108811416

Synonym: YPN_1253

Alternate gene names: NA

Gene position: 1427137-1426880 (Counterclockwise)

Preceding gene: 108811429

Following gene: 108811415

Centisome position: 31.47

GC content: 38.37

Gene sequence:

>258_bases
TTGCTTATTTTTTATAGCCTGAATAATTCAAGTTACAGCAAGGCGGCAAGCGAGAGACAAGTGGTCGAAAGCACATTTGA
ACAGCATTTACTCTGCTCACAGAGACAAGGCGAGATCCATGGATCGGCCGAGTCACGAAGAAAGCCAACGACCCGAATTA
TTTTTGGTATAAACGCTATAAAACTCACACAAAAAATCCATTACTCAAAAAATCAAAAAAAACTAAATATCATCAAAAAC
CTGCCAGGGAAATTTTGA

Upstream 100 bases:

>100_bases
AAACTTTATATTAGAATAAATAATTTATTGATAACTTTTTTTATTACAAATAAATTTATTATGAGAAACACATTTAAAAT
ACAAACACGAATACATTGAG

Downstream 100 bases:

>100_bases
CAATAAAAAAATAACAAAAAAATATCATATTATCATTTTAATAATTTTTTAAATAAAACACCGAATAATATTAAATAATC
GTTAAAAATCAACAAAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MLIFYSLNNSSYSKAASERQVVESTFEQHLLCSQRQGEIHGSAESRRKPTTRIIFGINAIKLTQKIHYSKNQKKLNIIKN
LPGKF

Sequences:

>Translated_85_residues
MLIFYSLNNSSYSKAASERQVVESTFEQHLLCSQRQGEIHGSAESRRKPTTRIIFGINAIKLTQKIHYSKNQKKLNIIKN
LPGKF
>Mature_85_residues
MLIFYSLNNSSYSKAASERQVVESTFEQHLLCSQRQGEIHGSAESRRKPTTRIIFGINAIKLTQKIHYSKNQKKLNIIKN
LPGKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9766; Mature: 9766

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIFYSLNNSSYSKAASERQVVESTFEQHLLCSQRQGEIHGSAESRRKPTTRIIFGINAI
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHH
KLTQKIHYSKNQKKLNIIKNLPGKF
HHHHHHHCCCCCCHHHHHHCCCCCC
>Mature Secondary Structure
MLIFYSLNNSSYSKAASERQVVESTFEQHLLCSQRQGEIHGSAESRRKPTTRIIFGINAI
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHH
KLTQKIHYSKNQKKLNIIKNLPGKF
HHHHHHHCCCCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA