Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is 108811416
Identifier: 108811416
GI number: 108811416
Start: 1426880
End: 1427137
Strand: Reverse
Name: 108811416
Synonym: YPN_1253
Alternate gene names: NA
Gene position: 1427137-1426880 (Counterclockwise)
Preceding gene: 108811429
Following gene: 108811415
Centisome position: 31.47
GC content: 38.37
Gene sequence:
>258_bases TTGCTTATTTTTTATAGCCTGAATAATTCAAGTTACAGCAAGGCGGCAAGCGAGAGACAAGTGGTCGAAAGCACATTTGA ACAGCATTTACTCTGCTCACAGAGACAAGGCGAGATCCATGGATCGGCCGAGTCACGAAGAAAGCCAACGACCCGAATTA TTTTTGGTATAAACGCTATAAAACTCACACAAAAAATCCATTACTCAAAAAATCAAAAAAAACTAAATATCATCAAAAAC CTGCCAGGGAAATTTTGA
Upstream 100 bases:
>100_bases AAACTTTATATTAGAATAAATAATTTATTGATAACTTTTTTTATTACAAATAAATTTATTATGAGAAACACATTTAAAAT ACAAACACGAATACATTGAG
Downstream 100 bases:
>100_bases CAATAAAAAAATAACAAAAAAATATCATATTATCATTTTAATAATTTTTTAAATAAAACACCGAATAATATTAAATAATC GTTAAAAATCAACAAAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 85
Protein sequence:
>85_residues MLIFYSLNNSSYSKAASERQVVESTFEQHLLCSQRQGEIHGSAESRRKPTTRIIFGINAIKLTQKIHYSKNQKKLNIIKN LPGKF
Sequences:
>Translated_85_residues MLIFYSLNNSSYSKAASERQVVESTFEQHLLCSQRQGEIHGSAESRRKPTTRIIFGINAIKLTQKIHYSKNQKKLNIIKN LPGKF >Mature_85_residues MLIFYSLNNSSYSKAASERQVVESTFEQHLLCSQRQGEIHGSAESRRKPTTRIIFGINAIKLTQKIHYSKNQKKLNIIKN LPGKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9766; Mature: 9766
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIFYSLNNSSYSKAASERQVVESTFEQHLLCSQRQGEIHGSAESRRKPTTRIIFGINAI CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHH KLTQKIHYSKNQKKLNIIKNLPGKF HHHHHHHCCCCCCHHHHHHCCCCCC >Mature Secondary Structure MLIFYSLNNSSYSKAASERQVVESTFEQHLLCSQRQGEIHGSAESRRKPTTRIIFGINAI CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCHH KLTQKIHYSKNQKKLNIIKNLPGKF HHHHHHHCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA