Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is 108811217
Identifier: 108811217
GI number: 108811217
Start: 1209227
End: 1209808
Strand: Reverse
Name: 108811217
Synonym: YPN_1053
Alternate gene names: NA
Gene position: 1209808-1209227 (Counterclockwise)
Preceding gene: 108811219
Following gene: 108811216
Centisome position: 26.68
GC content: 32.82
Gene sequence:
>582_bases ATGAAGTATAACTCAGTTTTAAAAACTTTTGTTGATGATGATTATCGATTAGAAGATCATCTTGATTTTAAAAAGCAACA TGCAGATATCAGATATCAAAAACTACATAAACAACTCAATGAAATGAGTGATGAAAATATGCATGCATTATTAACAATAG AGGAAGGGGAGTATTTTTTAAAAACATTATGTAATCCCAACCCTCACCAATCGTGGAAGGATGCTATTTTTTCCTGTACC GATCCCACATCGGTTTTTTTTGGAAGTCTCGTTGAGTCATTGTCTGTGAGTAGAATAGTCTTTGAAATAAGGGGGTTTGG TGTAACTGCAACTGAATATGTGGGGAAAAATGGCAGTTCATATATTAAATTATCTGGATATGCTGGAATAAGAAAGTATT TAGATGCAACAAGATACTTAATTGATAACCCAAAAATATTAGATATAGGCATAGGAACTCAAGGTATTGAAAATGGGATC GTTAGAGGCGCAAGATTCTGCATTGTATTTTCTGCTGCTTATCGTTCCGTTGAATTGTTGTTGAAAGATGAATATGGGTT AGCTGATTTTTTGTTAATTTAA
Upstream 100 bases:
>100_bases AGCAGATTTTAGCTTTTTGCCAGAAAATTATGGGATTCTGGTGCACAACTCCCTATAATGCGTTAACTTAACTTAAATTA TATACAGGGAGTTAATAATT
Downstream 100 bases:
>100_bases CTCTTGATGCTGCAAAACTAGGAGTATCTATTGGGGTTGCTTGGGGGGCAAAGGCGTTAGCTACCGGTTTTATGGTCGCC GGAGGTAGTGTTCTTGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKYNSVLKTFVDDDYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFLKTLCNPNPHQSWKDAIFSCT DPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSSYIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGI VRGARFCIVFSAAYRSVELLLKDEYGLADFLLI
Sequences:
>Translated_193_residues MKYNSVLKTFVDDDYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFLKTLCNPNPHQSWKDAIFSCT DPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSSYIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGI VRGARFCIVFSAAYRSVELLLKDEYGLADFLLI >Mature_193_residues MKYNSVLKTFVDDDYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFLKTLCNPNPHQSWKDAIFSCT DPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSSYIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGI VRGARFCIVFSAAYRSVELLLKDEYGLADFLLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21984; Mature: 21984
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYNSVLKTFVDDDYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFL CCHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHH KTLCNPNPHQSWKDAIFSCTDPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSS HHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC YIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGIVRGARFCIVFSAAYRSVELL EEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHEEEHHHHHHHHHHE LKDEYGLADFLLI EECCCCCHHHEEC >Mature Secondary Structure MKYNSVLKTFVDDDYRLEDHLDFKKQHADIRYQKLHKQLNEMSDENMHALLTIEEGEYFL CCHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEECCHHHH KTLCNPNPHQSWKDAIFSCTDPTSVFFGSLVESLSVSRIVFEIRGFGVTATEYVGKNGSS HHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCC YIKLSGYAGIRKYLDATRYLIDNPKILDIGIGTQGIENGIVRGARFCIVFSAAYRSVELL EEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHEEEHHHHHHHHHHE LKDEYGLADFLLI EECCCCCHHHEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA