Definition | Yersinia pestis Nepal516, complete genome. |
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Accession | NC_008149 |
Length | 4,534,590 |
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The map label for this gene is 108811215
Identifier: 108811215
GI number: 108811215
Start: 1208558
End: 1208998
Strand: Reverse
Name: 108811215
Synonym: YPN_1051
Alternate gene names: NA
Gene position: 1208998-1208558 (Counterclockwise)
Preceding gene: 108811216
Following gene: 108811214
Centisome position: 26.66
GC content: 33.56
Gene sequence:
>441_bases ATGCTGATCAATTCTTTAACGCTTGGGGGCGACTCAGCCGTGGTTAAAATAAACAGGCCATTAGTTGGTGCATTTGCAAT CTTGCTTTTCTTTCTTTCATCTTGGGGGTGCTGGTTTTCTTTAAGTGGATATTTAGCTTTCTTTAAATTAAGCGATGTTA TTATCTTTTCATGGAAGGTTGGGTTTGTAATATTTGCAGTCCCTTTATTGTTCTATTTTTCATACTTGGCATTTTTTTCT GCAATAAAAAATAAACCTGCAATAATGAATAACAAACTGGCTAATGCATTGGCTATTTTAGCTATATTGGGATCTATAAT TAGTTTATTTTCATCAGCATATATCAGTTATAGCCTCACCGAATATAGTTATAAATCATGCCCAAGATCATCTTGGATGT CCCCTAATAAATACGTAAAAGATATAAAGCTATGTCCATAG
Upstream 100 bases:
>100_bases CTCGCAAGCTTAATTTTATACTGGTTAGATAACGAATATAAAATAAGTGAAACAATAATAAAAAATATAAAATCGCATAG AGTACAAAATTCACCGTATC
Downstream 100 bases:
>100_bases TTAACCACTAATGCTGTTATATATTTCCGAGCACTATATTGCGCCTTGGCGCTGACTCCATTGTGCGCTACGGCTACCGG TATTCCATCGTATTTTCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 146
Protein sequence:
>146_residues MLINSLTLGGDSAVVKINRPLVGAFAILLFFLSSWGCWFSLSGYLAFFKLSDVIIFSWKVGFVIFAVPLLFYFSYLAFFS AIKNKPAIMNNKLANALAILAILGSIISLFSSAYISYSLTEYSYKSCPRSSWMSPNKYVKDIKLCP
Sequences:
>Translated_146_residues MLINSLTLGGDSAVVKINRPLVGAFAILLFFLSSWGCWFSLSGYLAFFKLSDVIIFSWKVGFVIFAVPLLFYFSYLAFFS AIKNKPAIMNNKLANALAILAILGSIISLFSSAYISYSLTEYSYKSCPRSSWMSPNKYVKDIKLCP >Mature_146_residues MLINSLTLGGDSAVVKINRPLVGAFAILLFFLSSWGCWFSLSGYLAFFKLSDVIIFSWKVGFVIFAVPLLFYFSYLAFFS AIKNKPAIMNNKLANALAILAILGSIISLFSSAYISYSLTEYSYKSCPRSSWMSPNKYVKDIKLCP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16276; Mature: 16276
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLINSLTLGGDSAVVKINRPLVGAFAILLFFLSSWGCWFSLSGYLAFFKLSDVIIFSWKV CCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHHH GFVIFAVPLLFYFSYLAFFSAIKNKPAIMNNKLANALAILAILGSIISLFSSAYISYSLT HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYSYKSCPRSSWMSPNKYVKDIKLCP HHHHHCCCCCCCCCCHHHHHHCCCCC >Mature Secondary Structure MLINSLTLGGDSAVVKINRPLVGAFAILLFFLSSWGCWFSLSGYLAFFKLSDVIIFSWKV CCCCCEEECCCCEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEHHHH GFVIFAVPLLFYFSYLAFFSAIKNKPAIMNNKLANALAILAILGSIISLFSSAYISYSLT HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYSYKSCPRSSWMSPNKYVKDIKLCP HHHHHCCCCCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA