Click here to switch to the map view.

The map label for this gene is qmcA [H]

Identifier: 108811171

GI number: 108811171

Start: 1164636

End: 1165550

Strand: Reverse

Name: qmcA [H]

Synonym: YPN_1006

Alternate gene names: 108811171

Gene position: 1165550-1164636 (Counterclockwise)

Preceding gene: 108811172

Following gene: 108811170

Centisome position: 25.7

GC content: 46.99

Gene sequence:

>915_bases
ATGTTCACAGTTATCCCTATTCTTATCGTTGTCGCTCTGATTGTCGTACTTTCTGCAATCAAAATCGTCCCGCAAGGTTT
TCAGTGGACTGTCGAACGTTTTGGTCGCTATACCAAAACACTGATGCCAGGCCTGAATATCGTTGTACCGTTTATGGATC
GTGTTGGCCGTAAAATTAATGTGATGGAACAAGTTCTTGATATTCCATCTCAAGAAATCATTTCCCGTGATAACGCCAAC
GTGGCAATCGATGCCGTTTGCTTTATCCAAGTTATTGACCCGGTGAAAGCGGCTTATGAAGTCAGCAATTTGGAATTGGC
TATCGTCAACCTGACCATGACCAACTTCCGTACCGTCTTAGGTTCGATGGAACTGGACGAAATGCTGTCTCAGCGCGATA
ACATCAACAGCCGCCTGCTGCATATCGTCGATGAAGCCACCAACCCATGGGGCATCAAAATCACCCGTATCGAAATCCGT
GATGTGCGTCCACCAACTGAACTGATTTCAGCGATGAATGCTCAGATGAAAGCTGAACGTACCAAGCGTGCGGATATTCT
GGAAGCTGAAGGGGTTCGTCAAGCCGCTATTTTGCGTGCCGAAGGTGAAAAGCAGTCACAAATTCTGAAAGCAGAAGGTG
AACGTCAGTCTGCATTCTTGCAAGCTGAAGCCCGTGAACGTGCCGCTGAAGCGGAAGCTCAGGCGACTAAAATGGTTTCT
GAAGCCATCGCTGCCGGTGATATTCAAGCCATTAACTACTTTGTGGCACAAAAATATACCGATGCACTGCAACACATCGG
CTCGGCCAATAACAGTAAAGTCATTATGATGCCGCTGGAAGCCAGTAGCCTCATGGGTGCTATCGGTGGTATTGCAGAAC
TGATTGGTGAGAGTAAAAACAGCCGAGGTAAATAA

Upstream 100 bases:

>100_bases
TTTTTCCTCTTTACACGCATTTACCGGTCTTTCGTTAGGTATTTAACCCCCCATCACGTAATATTAAGATACAATTTTTC
TTGCTGACAGGAAGTTAAGT

Downstream 100 bases:

>100_bases
CCATGCTGGAGGAAATTGCAGTAAATCCAAATTGGTTTTGGCTATCACTTGGCGGGCTATTATTGGCCGCTGAGATGCTG
GGAGCGAGTGGCTATCTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MFTVIPILIVVALIVVLSAIKIVPQGFQWTVERFGRYTKTLMPGLNIVVPFMDRVGRKINVMEQVLDIPSQEIISRDNAN
VAIDAVCFIQVIDPVKAAYEVSNLELAIVNLTMTNFRTVLGSMELDEMLSQRDNINSRLLHIVDEATNPWGIKITRIEIR
DVRPPTELISAMNAQMKAERTKRADILEAEGVRQAAILRAEGEKQSQILKAEGERQSAFLQAEARERAAEAEAQATKMVS
EAIAAGDIQAINYFVAQKYTDALQHIGSANNSKVIMMPLEASSLMGAIGGIAELIGESKNSRGK

Sequences:

>Translated_304_residues
MFTVIPILIVVALIVVLSAIKIVPQGFQWTVERFGRYTKTLMPGLNIVVPFMDRVGRKINVMEQVLDIPSQEIISRDNAN
VAIDAVCFIQVIDPVKAAYEVSNLELAIVNLTMTNFRTVLGSMELDEMLSQRDNINSRLLHIVDEATNPWGIKITRIEIR
DVRPPTELISAMNAQMKAERTKRADILEAEGVRQAAILRAEGEKQSQILKAEGERQSAFLQAEARERAAEAEAQATKMVS
EAIAAGDIQAINYFVAQKYTDALQHIGSANNSKVIMMPLEASSLMGAIGGIAELIGESKNSRGK
>Mature_304_residues
MFTVIPILIVVALIVVLSAIKIVPQGFQWTVERFGRYTKTLMPGLNIVVPFMDRVGRKINVMEQVLDIPSQEIISRDNAN
VAIDAVCFIQVIDPVKAAYEVSNLELAIVNLTMTNFRTVLGSMELDEMLSQRDNINSRLLHIVDEATNPWGIKITRIEIR
DVRPPTELISAMNAQMKAERTKRADILEAEGVRQAAILRAEGEKQSQILKAEGERQSAFLQAEARERAAEAEAQATKMVS
EAIAAGDIQAINYFVAQKYTDALQHIGSANNSKVIMMPLEASSLMGAIGGIAELIGESKNSRGK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=266, Percent_Identity=36.0902255639098, Blast_Score=179, Evalue=2e-45,
Organism=Homo sapiens, GI221316744, Length=194, Percent_Identity=33.5051546391753, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI21686995, Length=194, Percent_Identity=33.5051546391753, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI38016911, Length=223, Percent_Identity=32.7354260089686, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI7657615, Length=138, Percent_Identity=31.1594202898551, Blast_Score=77, Evalue=2e-14,
Organism=Escherichia coli, GI1786697, Length=302, Percent_Identity=83.7748344370861, Blast_Score=529, Evalue=1e-152,
Organism=Escherichia coli, GI1790616, Length=198, Percent_Identity=26.2626262626263, Blast_Score=64, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI32564147, Length=272, Percent_Identity=37.5, Blast_Score=182, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI17569493, Length=195, Percent_Identity=36.9230769230769, Blast_Score=126, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI193209764, Length=187, Percent_Identity=38.5026737967914, Blast_Score=125, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17569497, Length=187, Percent_Identity=29.4117647058824, Blast_Score=110, Evalue=9e-25,
Organism=Caenorhabditis elegans, GI71989948, Length=156, Percent_Identity=37.1794871794872, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71989955, Length=156, Percent_Identity=37.1794871794872, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71987612, Length=225, Percent_Identity=35.5555555555556, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI25153583, Length=225, Percent_Identity=35.5555555555556, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71987621, Length=225, Percent_Identity=35.5555555555556, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17569499, Length=226, Percent_Identity=33.1858407079646, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17570459, Length=199, Percent_Identity=34.6733668341709, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI193210507, Length=193, Percent_Identity=32.6424870466321, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17570161, Length=193, Percent_Identity=32.6424870466321, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI32566490, Length=188, Percent_Identity=33.5106382978723, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI71989963, Length=125, Percent_Identity=34.4, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45550506, Length=262, Percent_Identity=37.7862595419847, Blast_Score=185, Evalue=3e-47,
Organism=Drosophila melanogaster, GI45556022, Length=206, Percent_Identity=35.4368932038835, Blast_Score=108, Evalue=4e-24,
Organism=Drosophila melanogaster, GI18860517, Length=197, Percent_Identity=30.4568527918782, Blast_Score=104, Evalue=8e-23,
Organism=Drosophila melanogaster, GI62484448, Length=223, Percent_Identity=30.4932735426009, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI281365664, Length=223, Percent_Identity=30.4932735426009, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24657857, Length=223, Percent_Identity=30.4932735426009, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI62484274, Length=224, Percent_Identity=30.3571428571429, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI28573263, Length=198, Percent_Identity=28.2828282828283, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI21356845, Length=191, Percent_Identity=25.130890052356, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281361631, Length=191, Percent_Identity=24.6073298429319, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281361633, Length=191, Percent_Identity=24.6073298429319, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI281361635, Length=127, Percent_Identity=24.4094488188976, Blast_Score=66, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 33489; Mature: 33489

Theoretical pI: Translated: 5.27; Mature: 5.27

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTVIPILIVVALIVVLSAIKIVPQGFQWTVERFGRYTKTLMPGLNIVVPFMDRVGRKIN
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
VMEQVLDIPSQEIISRDNANVAIDAVCFIQVIDPVKAAYEVSNLELAIVNLTMTNFRTVL
HHHHHHCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHH
GSMELDEMLSQRDNINSRLLHIVDEATNPWGIKITRIEIRDVRPPTELISAMNAQMKAER
CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHH
TKRADILEAEGVRQAAILRAEGEKQSQILKAEGERQSAFLQAEARERAAEAEAQATKMVS
HHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIAAGDIQAINYFVAQKYTDALQHIGSANNSKVIMMPLEASSLMGAIGGIAELIGESKN
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCC
SRGK
CCCC
>Mature Secondary Structure
MFTVIPILIVVALIVVLSAIKIVPQGFQWTVERFGRYTKTLMPGLNIVVPFMDRVGRKIN
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHH
VMEQVLDIPSQEIISRDNANVAIDAVCFIQVIDPVKAAYEVSNLELAIVNLTMTNFRTVL
HHHHHHCCCCHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHH
GSMELDEMLSQRDNINSRLLHIVDEATNPWGIKITRIEIRDVRPPTELISAMNAQMKAER
CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHH
TKRADILEAEGVRQAAILRAEGEKQSQILKAEGERQSAFLQAEARERAAEAEAQATKMVS
HHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIAAGDIQAINYFVAQKYTDALQHIGSANNSKVIMMPLEASSLMGAIGGIAELIGESKN
HHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCC
SRGK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]