Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108811165

Identifier: 108811165

GI number: 108811165

Start: 1157915

End: 1158154

Strand: Reverse

Name: 108811165

Synonym: YPN_1000

Alternate gene names: NA

Gene position: 1158154-1157915 (Counterclockwise)

Preceding gene: 108811166

Following gene: 108811161

Centisome position: 25.54

GC content: 38.75

Gene sequence:

>240_bases
ATGGGTTATGATGCACACAAGAATGATCTTAATATAAAAGCAGATCTTATTGCCTTGAAGTATGTTGTTCAGACATTGGT
CGCAGTGGCTAACTCAGCGCACGATAACCGTCTCAATCAGGCACTGGATATACTTATCCATGAATTTGAAAGCAATGCCA
ATAAGAATAACGATAATCAAAGTATCGCTAATGCAATTGCAAACTATCTCCCCGATGAGCCTGTCATTGAACTTGTGTAA

Upstream 100 bases:

>100_bases
TCAATAACCTCAATGAGTTTAAAACTCATGAGATACATCAACGATAACCGCATGATTGCCATGCATACACAGCGTTCTCA
ATTTTAGTCGGGTGATTAAT

Downstream 100 bases:

>100_bases
TTAACCGGTATAGCCCAGCCACTCAGTGCCACTGGGCGATACCCTTAATTTTTACAGCTTGGTTTGCGGCAGATTATAAA
TAAGTACATCTTTAATAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MGYDAHKNDLNIKADLIALKYVVQTLVAVANSAHDNRLNQALDILIHEFESNANKNNDNQSIANAIANYLPDEPVIELV

Sequences:

>Translated_79_residues
MGYDAHKNDLNIKADLIALKYVVQTLVAVANSAHDNRLNQALDILIHEFESNANKNNDNQSIANAIANYLPDEPVIELV
>Mature_78_residues
GYDAHKNDLNIKADLIALKYVVQTLVAVANSAHDNRLNQALDILIHEFESNANKNNDNQSIANAIANYLPDEPVIELV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8743; Mature: 8612

Theoretical pI: Translated: 4.43; Mature: 4.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYDAHKNDLNIKADLIALKYVVQTLVAVANSAHDNRLNQALDILIHEFESNANKNNDNQ
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
SIANAIANYLPDEPVIELV
HHHHHHHHHCCCCCCEECC
>Mature Secondary Structure 
GYDAHKNDLNIKADLIALKYVVQTLVAVANSAHDNRLNQALDILIHEFESNANKNNDNQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCHH
SIANAIANYLPDEPVIELV
HHHHHHHHHCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA