Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108798018
Identifier: 108798018
GI number: 108798018
Start: 1143391
End: 1144317
Strand: Reverse
Name: 108798018
Synonym: Mmcs_1045
Alternate gene names: NA
Gene position: 1144317-1143391 (Counterclockwise)
Preceding gene: 108798026
Following gene: 108798017
Centisome position: 20.06
GC content: 71.41
Gene sequence:
>927_bases ATGGCACGTACCGACAACGACACGTGGGATCTGGCGTCCAGCGTCGGCGCCACCGCCACCATGGTCGCCGCGGCGCGGGC CGTGGCCACCCGAGCGCCCGACGCGGTCATCGACGATCCGTTCGCCGAACCCCTGGTCCGCGCGGTGGGTGTCGACTTCT TCACGCGGCTCGCCACCGGGGACCTCACGCCGACCGACCTCGACCCGGACGCCACCGGCGGCGCGGGCAACATGGACCGC TTCGCCGACGGGATGGCCGCGCGCACCCGTTTCTTCGACGACTTCTTCTCCGACGCCGCCGACGCCGGGGTGCGTCAGGC GGTCATCCTCGCCTCCGGGCTGGACTCGCGCGCCTACCGGCTGCCGTGGCCCGCGGGCACCGTCGTCTTCGAGATCGACC AGCCCGGCGTCATCACCTTCAAGAGCGACACCCTCGCCCGGCTCGGCGCGAAACCGACCGCCGTCCACCGAACGGTTCCG GTGGACCTGCGCGACGACTGGATCGGGGCGCTGGAGGCCGCCGGGTTCGACCGCACCGAACCGTCGGCGTGGATCGCCGA GGGGCTGTTCGGCTACCTGCCGCCCGAGGCGCAGGACCGGCTGCTCGATCAGATCACCGAACTCAGCCCGCCGGGGAGCC GGCTGGCCGTCGAGGGCGTGGTGAGCTCTCCCGACGCCGACGATGAGCAGATCCGCGAGCGGATGCAGGCGGTCCGTGAC CAGTGGCGTCAGTTCGGGTTCGACCTCGACTTCTCCGAGTTGGTCTACACCGGTGAACGCGCCGAGGTGGCGGCCTACCT CGGCGATCGCGGCTGGCGGACCGACAGCATCACCGCCACGGCCCTGCTGGAGAAGTGCGGGCTCCAGTCGGCCGAGGACT CCAGCGCCAACTTCGCCGACGTCCGTTACGTGACCGCGGTCAAGTAG
Upstream 100 bases:
>100_bases GCTCGCAGATTGCCTACAGGATCGAAGCGTACAGTCGGCGCAAGCTGGTTAATCCAGCTAAGTAACTCGATGGGTCGCTA TCTCGACAAGGGGTCAACCG
Downstream 100 bases:
>100_bases GGGCGCGGCGATGGCACGCAGCGACGAGGACACCTGGGACCTGGCCTCCAGTGTCGGGGCAACCGCGACGATGGTCGCCG CGGCGCGCGCGGTGGCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MARTDNDTWDLASSVGATATMVAAARAVATRAPDAVIDDPFAEPLVRAVGVDFFTRLATGDLTPTDLDPDATGGAGNMDR FADGMAARTRFFDDFFSDAADAGVRQAVILASGLDSRAYRLPWPAGTVVFEIDQPGVITFKSDTLARLGAKPTAVHRTVP VDLRDDWIGALEAAGFDRTEPSAWIAEGLFGYLPPEAQDRLLDQITELSPPGSRLAVEGVVSSPDADDEQIRERMQAVRD QWRQFGFDLDFSELVYTGERAEVAAYLGDRGWRTDSITATALLEKCGLQSAEDSSANFADVRYVTAVK
Sequences:
>Translated_308_residues MARTDNDTWDLASSVGATATMVAAARAVATRAPDAVIDDPFAEPLVRAVGVDFFTRLATGDLTPTDLDPDATGGAGNMDR FADGMAARTRFFDDFFSDAADAGVRQAVILASGLDSRAYRLPWPAGTVVFEIDQPGVITFKSDTLARLGAKPTAVHRTVP VDLRDDWIGALEAAGFDRTEPSAWIAEGLFGYLPPEAQDRLLDQITELSPPGSRLAVEGVVSSPDADDEQIRERMQAVRD QWRQFGFDLDFSELVYTGERAEVAAYLGDRGWRTDSITATALLEKCGLQSAEDSSANFADVRYVTAVK >Mature_307_residues ARTDNDTWDLASSVGATATMVAAARAVATRAPDAVIDDPFAEPLVRAVGVDFFTRLATGDLTPTDLDPDATGGAGNMDRF ADGMAARTRFFDDFFSDAADAGVRQAVILASGLDSRAYRLPWPAGTVVFEIDQPGVITFKSDTLARLGAKPTAVHRTVPV DLRDDWIGALEAAGFDRTEPSAWIAEGLFGYLPPEAQDRLLDQITELSPPGSRLAVEGVVSSPDADDEQIRERMQAVRDQ WRQFGFDLDFSELVYTGERAEVAAYLGDRGWRTDSITATALLEKCGLQSAEDSSANFADVRYVTAVK
Specific function: Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0677 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1045_MYCSS (Q1BD75)
Other databases:
- EMBL: CP000384 - RefSeq: YP_638215.1 - ProteinModelPortal: Q1BD75 - SMR: Q1BD75 - STRING: Q1BD75 - EnsemblBacteria: EBMYCT00000059874 - GeneID: 4109884 - GenomeReviews: CP000384_GR - KEGG: mmc:Mmcs_1045 - eggNOG: COG3315 - GeneTree: EBGT00050000015698 - HOGENOM: HBG570783 - OMA: RTENDTW - ProtClustDB: CLSK724903 - BioCyc: MSP164756:MMCS_1045-MONOMER - InterPro: IPR011610 - InterPro: IPR007213 - TIGRFAMs: TIGR00027
Pfam domain/function: PF04072 LCM
EC number: NA
Molecular weight: Translated: 33234; Mature: 33103
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: BINDING 133-133
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTDNDTWDLASSVGATATMVAAARAVATRAPDAVIDDPFAEPLVRAVGVDFFTRLATG CCCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC DLTPTDLDPDATGGAGNMDRFADGMAARTRFFDDFFSDAADAGVRQAVILASGLDSRAYR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEE LPWPAGTVVFEIDQPGVITFKSDTLARLGAKPTAVHRTVPVDLRDDWIGALEAAGFDRTE CCCCCCCEEEEECCCCEEEECCCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCC PSAWIAEGLFGYLPPEAQDRLLDQITELSPPGSRLAVEGVVSSPDADDEQIRERMQAVRD CHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH QWRQFGFDLDFSELVYTGERAEVAAYLGDRGWRTDSITATALLEKCGLQSAEDSSANFAD HHHHHCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHH VRYVTAVK EEEEEECC >Mature Secondary Structure ARTDNDTWDLASSVGATATMVAAARAVATRAPDAVIDDPFAEPLVRAVGVDFFTRLATG CCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC DLTPTDLDPDATGGAGNMDRFADGMAARTRFFDDFFSDAADAGVRQAVILASGLDSRAYR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCEE LPWPAGTVVFEIDQPGVITFKSDTLARLGAKPTAVHRTVPVDLRDDWIGALEAAGFDRTE CCCCCCCEEEEECCCCEEEECCCHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCC PSAWIAEGLFGYLPPEAQDRLLDQITELSPPGSRLAVEGVVSSPDADDEQIRERMQAVRD CHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH QWRQFGFDLDFSELVYTGERAEVAAYLGDRGWRTDSITATALLEKCGLQSAEDSSANFAD HHHHHCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHH VRYVTAVK EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA