Click here to switch to the map view.

The map label for this gene is 108797971

Identifier: 108797971

GI number: 108797971

Start: 1103899

End: 1104498

Strand: Reverse

Name: 108797971

Synonym: Mmcs_0998

Alternate gene names: NA

Gene position: 1104498-1103899 (Counterclockwise)

Preceding gene: 108797979

Following gene: 108797970

Centisome position: 19.36

GC content: 70.0

Gene sequence:

>600_bases
ATGCGGCAGGAATCCGCGCCCCGGGTCGGCCGCCGTCGCTCCACCACCCAGGACCACATCACCGACGTCGCGCTCGACAT
GTTCGCCGCCCGCGGGTTCGACGAGGTCAGTGTCGACGACGTGGCCGCCGCCGCCGGCATCGCCCGGCGCACGCTGTTCC
GCTACTACTCGTCCAAGAGCGCGATCCCGTGGGGCGACTTCGACGCACACCTCGAGCACATGCGGCACCTGTTCGACGAT
CTCGACCCGACCGTTCCCGTCGACGAAGCGCTGCGGGCCGCGCTGCTCGCGTTCAACCACTTCGACGCCGCCGAGACCGC
CAGGCACCGCCAGCGGATGCGCGTCATCCTGCAAACCGATGCGCTGCAGGCGTATTCGATGACCATGTACGCCGGCTGGC
GGGCGGTTATCGCCCAGTTCGTCGCCGACCGCATCGGCGTCAAGGCCCACGATCTGGTGCCGCAGACGGTGGCGTGGACG
ATGCTCGGCGTCGCGCTGTCGGCCTACGAACAGTGGCTGGCCGACGAGGCGGTGTCGCTGGCGCAGGCGCTGGGCGACGC
CTTCGACACCGTCCGCGACGGTCTGCGCGCCCTGCATTAG

Upstream 100 bases:

>100_bases
GCTCCATGAGCACTGCCTTTCGTCGCGTAGGGTCACTGAAATGTGACCTAGGTCGCCTAGGATATGGCATCGAGTGCCAG
AACGGAAGGGGTGGGTTGTC

Downstream 100 bases:

>100_bases
CGATTTCGGCGTGGCTGGTCGCGGTGGGCGCGACCAAGCACGCCGAAATCACTCGGGAAAAGGGCGTCGGAGTTCGGGGC
GCAACGGCGACGATGAGGGT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulatory Protein; Regulatory Protein TetR; Transcriptional Regulatory Protein TetR; Transcriptional Regulator TetR Family; AcrR Family Transcriptional Regulator; Tetr Family Transcriptional Regulator

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MRQESAPRVGRRRSTTQDHITDVALDMFAARGFDEVSVDDVAAAAGIARRTLFRYYSSKSAIPWGDFDAHLEHMRHLFDD
LDPTVPVDEALRAALLAFNHFDAAETARHRQRMRVILQTDALQAYSMTMYAGWRAVIAQFVADRIGVKAHDLVPQTVAWT
MLGVALSAYEQWLADEAVSLAQALGDAFDTVRDGLRALH

Sequences:

>Translated_199_residues
MRQESAPRVGRRRSTTQDHITDVALDMFAARGFDEVSVDDVAAAAGIARRTLFRYYSSKSAIPWGDFDAHLEHMRHLFDD
LDPTVPVDEALRAALLAFNHFDAAETARHRQRMRVILQTDALQAYSMTMYAGWRAVIAQFVADRIGVKAHDLVPQTVAWT
MLGVALSAYEQWLADEAVSLAQALGDAFDTVRDGLRALH
>Mature_199_residues
MRQESAPRVGRRRSTTQDHITDVALDMFAARGFDEVSVDDVAAAAGIARRTLFRYYSSKSAIPWGDFDAHLEHMRHLFDD
LDPTVPVDEALRAALLAFNHFDAAETARHRQRMRVILQTDALQAYSMTMYAGWRAVIAQFVADRIGVKAHDLVPQTVAWT
MLGVALSAYEQWLADEAVSLAQALGDAFDTVRDGLRALH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22229; Mature: 22229

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQESAPRVGRRRSTTQDHITDVALDMFAARGFDEVSVDDVAAAAGIARRTLFRYYSSKS
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
AIPWGDFDAHLEHMRHLFDDLDPTVPVDEALRAALLAFNHFDAAETARHRQRMRVILQTD
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ALQAYSMTMYAGWRAVIAQFVADRIGVKAHDLVPQTVAWTMLGVALSAYEQWLADEAVSL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQALGDAFDTVRDGLRALH
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRQESAPRVGRRRSTTQDHITDVALDMFAARGFDEVSVDDVAAAAGIARRTLFRYYSSKS
CCCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
AIPWGDFDAHLEHMRHLFDDLDPTVPVDEALRAALLAFNHFDAAETARHRQRMRVILQTD
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ALQAYSMTMYAGWRAVIAQFVADRIGVKAHDLVPQTVAWTMLGVALSAYEQWLADEAVSL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQALGDAFDTVRDGLRALH
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA