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The map label for this gene is aidB [H]

Identifier: 108797948

GI number: 108797948

Start: 1082884

End: 1084539

Strand: Direct

Name: aidB [H]

Synonym: Mmcs_0975

Alternate gene names: 108797948

Gene position: 1082884-1084539 (Clockwise)

Preceding gene: 108797946

Following gene: 108797949

Centisome position: 18.98

GC content: 71.5

Gene sequence:

>1656_bases
ATGGCTGTCAATGTCTCGCCCCTCGCGTCCGCGGGCACGCACGTCGTCACCAACCAGGTCCCGCTGCTCGAGGACCACAA
CCCGGCCGCCTCGCCGGTGCTCACCGAGGCGTTGATCCGCGAGGGCGGGGGGTGGGGCCTCGACGAGGTCGCCGAACTGG
GAGCGCTCTCGGGAAGCGCGCAGGCCCAGCGGTGGGGTGAGCTCGCCGACCGGAACCGGCCCGTCCTGCACACCCACGAC
CGCGTCGGCCACCGCATCGACGAGGTCGAGTACGACCCCGCCTACCACTCGCTGATGGCCGTCGCCGTCGGCCACGGACT
GCACGCCGCGCCATGGGCCGACGACCGCGCCGGCGCCCACGTCGTCCGCGCGGCCAAGACGTCGGTGTGGACACCCGAAC
CCGGGCACATCTGCCCGATCTCGATGACCTACGCCGTCGTCCCCGCCCTGCGCTTCAACCCCGACCTGGCCGCCGTCTAC
GAACCGCTGCTGACCAGCCGGGTGTACGACCCGGAACTGAAGGTGCCCGCGACCAAGGCCGGCATCACCGCGGGCATGTC
GATGACCGAGAAGCAGGGCGGCTCCGACGTGCGCGCCGGCACCACGCAGGCGGTGCCCAACGGTGACGGGACCTACTCGC
TGACGGGCCACAAGTGGTTCACCTCGGCGCCGATGTGCGACATCTTCCTGGTGCTCGCCCAAGCGCCGGGCGGGTTGAGC
TGCTTCTTCCTGCCGCGCATCCTGCCCGACGGCACCCGCAACCGGATGTTGTTGCAGCGCCTCAAGGACAAGCTCGGCAA
CCACGCCAACGCCTCGAGTGAGGTCGAGTACGACGGGGCGACGGCCTGGCTGGTCGGCGAGGAGGGTCGTGGCGTGCCGA
CCATCATCGAGATGGTCAACCTCACCCGGCTGGACTGCACACTGGGTTCGGCGACGAGTATGCGCAGCGGGCTCACCCGG
GCGATCCACCACGCGCAGCACCGCAAGGCGTTCGGCGAGTACCTGATCGACCAGCCGCTGATGCGCAACGTGCTCGCCGA
CCTGGCCGTCGAGGCGGAGGCCGCCACGATGGTCGCGATGCGGATGGCCGGCGCCACCGACCGCGCCGTACGCGGCGACT
CCCGCGAGGCGCTGCTGCGCCGCATCGGGCTGGCCGCCGCGAAGTACTGGGTGTGTAAACGCGCCACCCCGCACGCGGCC
GAGGCGATGGAGTGCCTGGGCGGCAACGGCTATGTCGAGGACTCGGGGATGCCGCGGCTGTACCGCGAGGCGCCGCTGAT
GGGTATCTGGGAGGGGTCCGGCAACGTCAGCGCGCTGGATACGTTGCGCGCCATGGCAACCCGACCGGAGAGCGTCGAGG
TGCTGTTCGACGAGCTGGCGCAGTCGGCCGGTCAGGACGCCCGGCTCGACGCACATGTCGAGGGGCTGCGGTCGGCGCTC
GACGACCTCGCCACCGTGCAGTACCGGGCGCGCAAGGTGGCCGAGGACATCTGCCTGGCCCTGCAGGGTGCGCTGCTGGT
GCGGCACGGTCATCCGGCGGTGGCCGAGGCGTTCCTGGCGACCCGGTTGGGCGGGCAGTGGGGCGGCGCGTTCGGCACGC
TGCCCGTCGGCCTGGACCTCGCGCCGATCCTCGAGCGCGCGTTGGTGAAGGGGTGA

Upstream 100 bases:

>100_bases
GAGGTCCAGGGCGGCGGCGGGGACGACGGAGTTCGGCGGCACGGGACCGACAGTATTACAGGTCTTGTGCGGTTGTCGGG
TGAGGTGTAACACTGCGGGT

Downstream 100 bases:

>100_bases
CTTCTTCGGCCGAGCAGACACAAAAGTACCCGACACGCCGCGAATTTCGGGACATATGTGTCTGCTCGCGAGGAAGGGTG
ACCGCATGACGCACGCGATC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MAVNVSPLASAGTHVVTNQVPLLEDHNPAASPVLTEALIREGGGWGLDEVAELGALSGSAQAQRWGELADRNRPVLHTHD
RVGHRIDEVEYDPAYHSLMAVAVGHGLHAAPWADDRAGAHVVRAAKTSVWTPEPGHICPISMTYAVVPALRFNPDLAAVY
EPLLTSRVYDPELKVPATKAGITAGMSMTEKQGGSDVRAGTTQAVPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPGGLS
CFFLPRILPDGTRNRMLLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLDCTLGSATSMRSGLTR
AIHHAQHRKAFGEYLIDQPLMRNVLADLAVEAEAATMVAMRMAGATDRAVRGDSREALLRRIGLAAAKYWVCKRATPHAA
EAMECLGGNGYVEDSGMPRLYREAPLMGIWEGSGNVSALDTLRAMATRPESVEVLFDELAQSAGQDARLDAHVEGLRSAL
DDLATVQYRARKVAEDICLALQGALLVRHGHPAVAEAFLATRLGGQWGGAFGTLPVGLDLAPILERALVKG

Sequences:

>Translated_551_residues
MAVNVSPLASAGTHVVTNQVPLLEDHNPAASPVLTEALIREGGGWGLDEVAELGALSGSAQAQRWGELADRNRPVLHTHD
RVGHRIDEVEYDPAYHSLMAVAVGHGLHAAPWADDRAGAHVVRAAKTSVWTPEPGHICPISMTYAVVPALRFNPDLAAVY
EPLLTSRVYDPELKVPATKAGITAGMSMTEKQGGSDVRAGTTQAVPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPGGLS
CFFLPRILPDGTRNRMLLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLDCTLGSATSMRSGLTR
AIHHAQHRKAFGEYLIDQPLMRNVLADLAVEAEAATMVAMRMAGATDRAVRGDSREALLRRIGLAAAKYWVCKRATPHAA
EAMECLGGNGYVEDSGMPRLYREAPLMGIWEGSGNVSALDTLRAMATRPESVEVLFDELAQSAGQDARLDAHVEGLRSAL
DDLATVQYRARKVAEDICLALQGALLVRHGHPAVAEAFLATRLGGQWGGAFGTLPVGLDLAPILERALVKG
>Mature_550_residues
AVNVSPLASAGTHVVTNQVPLLEDHNPAASPVLTEALIREGGGWGLDEVAELGALSGSAQAQRWGELADRNRPVLHTHDR
VGHRIDEVEYDPAYHSLMAVAVGHGLHAAPWADDRAGAHVVRAAKTSVWTPEPGHICPISMTYAVVPALRFNPDLAAVYE
PLLTSRVYDPELKVPATKAGITAGMSMTEKQGGSDVRAGTTQAVPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPGGLSC
FFLPRILPDGTRNRMLLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVNLTRLDCTLGSATSMRSGLTRA
IHHAQHRKAFGEYLIDQPLMRNVLADLAVEAEAATMVAMRMAGATDRAVRGDSREALLRRIGLAAAKYWVCKRATPHAAE
AMECLGGNGYVEDSGMPRLYREAPLMGIWEGSGNVSALDTLRAMATRPESVEVLFDELAQSAGQDARLDAHVEGLRSALD
DLATVQYRARKVAEDICLALQGALLVRHGHPAVAEAFLATRLGGQWGGAFGTLPVGLDLAPILERALVKG

Specific function: May help to prevent alkylation damage by protecting DNA and destroying alkylating agents [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=286, Percent_Identity=27.6223776223776, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI226958414, Length=286, Percent_Identity=27.6223776223776, Blast_Score=90, Evalue=6e-18,
Organism=Homo sapiens, GI4557235, Length=295, Percent_Identity=27.4576271186441, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI76496475, Length=295, Percent_Identity=27.4576271186441, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI4557233, Length=274, Percent_Identity=26.2773722627737, Blast_Score=81, Evalue=2e-15,
Organism=Homo sapiens, GI4501859, Length=266, Percent_Identity=25.5639097744361, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI7656849, Length=274, Percent_Identity=27.3722627737226, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI87082384, Length=518, Percent_Identity=44.5945945945946, Blast_Score=409, Evalue=1e-115,
Organism=Caenorhabditis elegans, GI86563383, Length=488, Percent_Identity=30.5327868852459, Blast_Score=195, Evalue=7e-50,
Organism=Caenorhabditis elegans, GI86563381, Length=488, Percent_Identity=30.7377049180328, Blast_Score=194, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI17538396, Length=269, Percent_Identity=27.8810408921933, Blast_Score=96, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17508101, Length=266, Percent_Identity=27.8195488721804, Blast_Score=92, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17506239, Length=268, Percent_Identity=27.9850746268657, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71985184, Length=268, Percent_Identity=24.2537313432836, Blast_Score=81, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17569725, Length=276, Percent_Identity=24.6376811594203, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71985192, Length=224, Percent_Identity=24.5535714285714, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17570075, Length=280, Percent_Identity=23.9285714285714, Blast_Score=65, Evalue=7e-11,
Organism=Drosophila melanogaster, GI281363737, Length=383, Percent_Identity=24.8041775456919, Blast_Score=85, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21356377, Length=274, Percent_Identity=26.2773722627737, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI21355753, Length=263, Percent_Identity=25.4752851711027, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24666513, Length=262, Percent_Identity=23.6641221374046, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24646207, Length=274, Percent_Identity=24.4525547445255, Blast_Score=73, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24660351, Length=277, Percent_Identity=24.5487364620939, Blast_Score=66, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M [H]

EC number: NA

Molecular weight: Translated: 58872; Mature: 58741

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNVSPLASAGTHVVTNQVPLLEDHNPAASPVLTEALIREGGGWGLDEVAELGALSGSA
CCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCH
QAQRWGELADRNRPVLHTHDRVGHRIDEVEYDPAYHSLMAVAVGHGLHAAPWADDRAGAH
HHHHHHHHHHCCCCEEECCHHHCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH
VVRAAKTSVWTPEPGHICPISMTYAVVPALRFNPDLAAVYEPLLTSRVYDPELKVPATKA
HHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
GITAGMSMTEKQGGSDVRAGTTQAVPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPGGLS
HHHHCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCHHHHHHHHHCCCCCCE
CFFLPRILPDGTRNRMLLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVN
EEEHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHHHH
LTRLDCTLGSATSMRSGLTRAIHHAQHRKAFGEYLIDQPLMRNVLADLAVEAEAATMVAM
HHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
RMAGATDRAVRGDSREALLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRL
HHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEECCCCCCHH
YREAPLMGIWEGSGNVSALDTLRAMATRPESVEVLFDELAQSAGQDARLDAHVEGLRSAL
HHHCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DDLATVQYRARKVAEDICLALQGALLVRHGHPAVAEAFLATRLGGQWGGAFGTLPVGLDL
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
APILERALVKG
HHHHHHHHHCC
>Mature Secondary Structure 
AVNVSPLASAGTHVVTNQVPLLEDHNPAASPVLTEALIREGGGWGLDEVAELGALSGSA
CCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHCCCCCH
QAQRWGELADRNRPVLHTHDRVGHRIDEVEYDPAYHSLMAVAVGHGLHAAPWADDRAGAH
HHHHHHHHHHCCCCEEECCHHHCCHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH
VVRAAKTSVWTPEPGHICPISMTYAVVPALRFNPDLAAVYEPLLTSRVYDPELKVPATKA
HHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHH
GITAGMSMTEKQGGSDVRAGTTQAVPNGDGTYSLTGHKWFTSAPMCDIFLVLAQAPGGLS
HHHHCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCHHHHHHHHHCCCCCCE
CFFLPRILPDGTRNRMLLQRLKDKLGNHANASSEVEYDGATAWLVGEEGRGVPTIIEMVN
EEEHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHHHH
LTRLDCTLGSATSMRSGLTRAIHHAQHRKAFGEYLIDQPLMRNVLADLAVEAEAATMVAM
HHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
RMAGATDRAVRGDSREALLRRIGLAAAKYWVCKRATPHAAEAMECLGGNGYVEDSGMPRL
HHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEECCCCCCHH
YREAPLMGIWEGSGNVSALDTLRAMATRPESVEVLFDELAQSAGQDARLDAHVEGLRSAL
HHHCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
DDLATVQYRARKVAEDICLALQGALLVRHGHPAVAEAFLATRLGGQWGGAFGTLPVGLDL
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
APILERALVKG
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961409; 7610040; 9278503 [H]