Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797945
Identifier: 108797945
GI number: 108797945
Start: 1079511
End: 1080473
Strand: Direct
Name: 108797945
Synonym: Mmcs_0971
Alternate gene names: NA
Gene position: 1079511-1080473 (Clockwise)
Preceding gene: 108797944
Following gene: 108797946
Centisome position: 18.92
GC content: 69.06
Gene sequence:
>963_bases TTGCGTCTGCTGGGCGGGTTATCCACAGGCGGTCGGGGCGGTTGCTATGCCGTGGGGCGGGTCCTTGCCAGCATCGGGCG CATGCTCATCGACGACGTGTTCGCGTCACACGGGGGAGTCGCCACCGCCCGGCAACTGAGTGCGGTCATGTCCCGCAAGA CGCTGGCGGGGCACCTACGGGCGGGCGTGATCGTCCGGGTCTGGCACGGCGTCTACTCGCTCGGGCCGCCCGACACCGCG AGGAGGTTGGCGGCGCTGGACGTGTTGGTGGGCCGGCCGGTCGTCGCATGCCTTCACACCGCGGCCGACCTGCACGGTTT CCGGACCGAGGGTCCAGGGCCGGTGCACATCCTCGATCCGGGAGTGCGGATGCGTCCGACGGTTGGCCTGATGGTTCATC AACGGGTGGGAGCGCCGTTGCGACGGGTCGCCGGTCGACTGGTGACGGCGCCGGCGTGGACGGCGGTCGAGATCGCTCGG ACGCTCAATCGACCGCGCGCGCTCGCGACGTTGGACGCCGCACTCCACGTCGGAGCGTGTGCACCTGCCGACCTCGTGCG CGCGGTCGACGAGCAGAAGGGCCGTCGCGGCATCGTCAAGGTGCGTGAGCTGGTGGCGTATGTGGACGGTCGCTCCGAAT CGCCGATGGAAAGCGAGACTCGGCTGGTCTTCATCGACGGGGGGCTGCCGCGGCCGGAAGTGCAGTTCGAAATCGTCGAC CGCTGCGGTCAGCTGTGGCGGGCGGACTTCGCGTGGCCGGCGGCGAAGGTTGTCGCCGAGTACGAAAGCATGGAGTGGCA TGCGAATGCCGTCGCGCTGCGACACGACCGGATGAAGACCGCACGGCTGCAGGAATGCGGATGGACCGTGATCCCGATCG TGGTGGACGACGTGCGTCACCATCCGCTGGATCTGGTCGCGGGCATCGCCACGCACCTCGAACGCGCGGACATGGCCGGA TGA
Upstream 100 bases:
>100_bases GCGGTGCCGCTGGACGATTACGGGTACAGCGACTACCGCTAGTCACCTCTCTGCGCGAGCAGACACAAATGTCCCCGCAC GCTCGGCGTGTCGGGGACAT
Downstream 100 bases:
>100_bases ACTCCTTCTCACCGGCGAGCAGACGCAAATGTCCCGGATTTCGCGGCATTTCGGGGACATTTGCGTCTGCTCGCGCTGGT TGGGGGTGTGTCGGCGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 320; Mature: 320
Protein sequence:
>320_residues MRLLGGLSTGGRGGCYAVGRVLASIGRMLIDDVFASHGGVATARQLSAVMSRKTLAGHLRAGVIVRVWHGVYSLGPPDTA RRLAALDVLVGRPVVACLHTAADLHGFRTEGPGPVHILDPGVRMRPTVGLMVHQRVGAPLRRVAGRLVTAPAWTAVEIAR TLNRPRALATLDAALHVGACAPADLVRAVDEQKGRRGIVKVRELVAYVDGRSESPMESETRLVFIDGGLPRPEVQFEIVD RCGQLWRADFAWPAAKVVAEYESMEWHANAVALRHDRMKTARLQECGWTVIPIVVDDVRHHPLDLVAGIATHLERADMAG
Sequences:
>Translated_320_residues MRLLGGLSTGGRGGCYAVGRVLASIGRMLIDDVFASHGGVATARQLSAVMSRKTLAGHLRAGVIVRVWHGVYSLGPPDTA RRLAALDVLVGRPVVACLHTAADLHGFRTEGPGPVHILDPGVRMRPTVGLMVHQRVGAPLRRVAGRLVTAPAWTAVEIAR TLNRPRALATLDAALHVGACAPADLVRAVDEQKGRRGIVKVRELVAYVDGRSESPMESETRLVFIDGGLPRPEVQFEIVD RCGQLWRADFAWPAAKVVAEYESMEWHANAVALRHDRMKTARLQECGWTVIPIVVDDVRHHPLDLVAGIATHLERADMAG >Mature_320_residues MRLLGGLSTGGRGGCYAVGRVLASIGRMLIDDVFASHGGVATARQLSAVMSRKTLAGHLRAGVIVRVWHGVYSLGPPDTA RRLAALDVLVGRPVVACLHTAADLHGFRTEGPGPVHILDPGVRMRPTVGLMVHQRVGAPLRRVAGRLVTAPAWTAVEIAR TLNRPRALATLDAALHVGACAPADLVRAVDEQKGRRGIVKVRELVAYVDGRSESPMESETRLVFIDGGLPRPEVQFEIVD RCGQLWRADFAWPAAKVVAEYESMEWHANAVALRHDRMKTARLQECGWTVIPIVVDDVRHHPLDLVAGIATHLERADMAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34569; Mature: 34569
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLGGLSTGGRGGCYAVGRVLASIGRMLIDDVFASHGGVATARQLSAVMSRKTLAGHLR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AGVIVRVWHGVYSLGPPDTARRLAALDVLVGRPVVACLHTAADLHGFRTEGPGPVHILDP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEECC GVRMRPTVGLMVHQRVGAPLRRVAGRLVTAPAWTAVEIARTLNRPRALATLDAALHVGAC CCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCC APADLVRAVDEQKGRRGIVKVRELVAYVDGRSESPMESETRLVFIDGGLPRPEVQFEIVD CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH RCGQLWRADFAWPAAKVVAEYESMEWHANAVALRHDRMKTARLQECGWTVIPIVVDDVRH HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC HPLDLVAGIATHLERADMAG CHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLLGGLSTGGRGGCYAVGRVLASIGRMLIDDVFASHGGVATARQLSAVMSRKTLAGHLR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH AGVIVRVWHGVYSLGPPDTARRLAALDVLVGRPVVACLHTAADLHGFRTEGPGPVHILDP HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEECC GVRMRPTVGLMVHQRVGAPLRRVAGRLVTAPAWTAVEIARTLNRPRALATLDAALHVGAC CCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCC APADLVRAVDEQKGRRGIVKVRELVAYVDGRSESPMESETRLVFIDGGLPRPEVQFEIVD CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHH RCGQLWRADFAWPAAKVVAEYESMEWHANAVALRHDRMKTARLQECGWTVIPIVVDDVRH HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC HPLDLVAGIATHLERADMAG CHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]