Definition | Mycobacterium sp. MCS chromosome, complete genome. |
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Accession | NC_008146 |
Length | 5,705,448 |
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The map label for this gene is 108797936
Identifier: 108797936
GI number: 108797936
Start: 1062271
End: 1063038
Strand: Direct
Name: 108797936
Synonym: Mmcs_0962
Alternate gene names: NA
Gene position: 1062271-1063038 (Clockwise)
Preceding gene: 108797934
Following gene: 108797937
Centisome position: 18.62
GC content: 71.09
Gene sequence:
>768_bases ATGCGTGTGGCGACATTCAACATTCTGCACGGGCGAAGCGTGCACGACGGTGAGGTCGACGTCGACCGGTTGGCGCAGTC GATCCGCGAACTCGACGCCGACATCGTCGCGCTGCAGGAGGTGGACCTGCACCAACCCCGCTCGGGCACGACCGACCTGA CCGCCGTCGCGGCCGAGGCGATGCGCGCGGTCAGCCACCGGTTCGTCGCCGCGATCGCCGGCACCCCCGGGGCGACGTGG ATGGCCGCCACCGGCCGTGAGCAGCCCGGGACCGCGGCCTACGGCATCGCGCTGCTGTCGCGCTTCCCGGCCGAGACCTG GCAGGTGGTGCGGCTGCCGCGGATCCCGGTGCCCTTCCCGATGTACCTGCCCGGCCCCAACCGCGTGCAGATCGTCAACG AGGAACCCCGCGCCGCGATGGTCGGCACCTTCGACACCCCGCTCGGGCCGCTGACCGTCGCCAACACCCACCTGTCGTTC GTGCCCGGCTGGAATCGGGTGCAGATGCGGCACCTCGTGCGGGACCTGCGCGGGTTCGAGGGACCGAGGATGCTCCTCGG TGACCTCAACATGAGCCCACCCACTCCGGCCCGGTGGGCGCGGATGCGCAGCCTCGGGGAGGGGCTGACCTTCCCGGCCC ACGCCCCCGACCGCCAACTCGACCACGTCCTCACCGACGATCCGCGGTTGCGCGTCGAGAAGTGCTCGGCGGTGAGTCTG CCGATTTCCGATCACCGCGCGCTCGTCGTCGACATTTCCCGCGACTGA
Upstream 100 bases:
>100_bases GGCCGAGCGGCGCAGCGCATCACGCAGCGCGTCGTTACGGGCGGACATCGGCCTACTTCCGGGGTGTCTGTGAATTGCCG GGGCGGGTACCTAGTACCCC
Downstream 100 bases:
>100_bases CGCCGTAGGGTTTCCCAGCGTGCACGTCCTCTCCGCGGAGTCGACGGATCTGTTCGTCGGTCCGCCGGACGCACCGCAGC AGGTCGTCCGGGTGACCTAC
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: Secreted Protein; Metal-Dependent Hydrolase
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MRVATFNILHGRSVHDGEVDVDRLAQSIRELDADIVALQEVDLHQPRSGTTDLTAVAAEAMRAVSHRFVAAIAGTPGATW MAATGREQPGTAAYGIALLSRFPAETWQVVRLPRIPVPFPMYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSF VPGWNRVQMRHLVRDLRGFEGPRMLLGDLNMSPPTPARWARMRSLGEGLTFPAHAPDRQLDHVLTDDPRLRVEKCSAVSL PISDHRALVVDISRD
Sequences:
>Translated_255_residues MRVATFNILHGRSVHDGEVDVDRLAQSIRELDADIVALQEVDLHQPRSGTTDLTAVAAEAMRAVSHRFVAAIAGTPGATW MAATGREQPGTAAYGIALLSRFPAETWQVVRLPRIPVPFPMYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSF VPGWNRVQMRHLVRDLRGFEGPRMLLGDLNMSPPTPARWARMRSLGEGLTFPAHAPDRQLDHVLTDDPRLRVEKCSAVSL PISDHRALVVDISRD >Mature_255_residues MRVATFNILHGRSVHDGEVDVDRLAQSIRELDADIVALQEVDLHQPRSGTTDLTAVAAEAMRAVSHRFVAAIAGTPGATW MAATGREQPGTAAYGIALLSRFPAETWQVVRLPRIPVPFPMYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSF VPGWNRVQMRHLVRDLRGFEGPRMLLGDLNMSPPTPARWARMRSLGEGLTFPAHAPDRQLDHVLTDDPRLRVEKCSAVSL PISDHRALVVDISRD
Specific function: Unknown
COG id: COG3568
COG function: function code R; Metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28047; Mature: 28047
Theoretical pI: Translated: 7.35; Mature: 7.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVATFNILHGRSVHDGEVDVDRLAQSIRELDADIVALQEVDLHQPRSGTTDLTAVAAEA CEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCHHEEEEECCCCCCCCCCCCHHHHHHHHH MRAVSHRFVAAIAGTPGATWMAATGREQPGTAAYGIALLSRFPAETWQVVRLPRIPVPFP HHHHHHHHEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCC MYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSFVPGWNRVQMRHLVRDLRGFE EECCCCCEEEEECCCCCEEEEECCCCCCCCEEEECCEEEECCCCCHHHHHHHHHHHHCCC GPRMLLGDLNMSPPTPARWARMRSLGEGLTFPAHAPDRQLDHVLTDDPRLRVEKCSAVSL CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEEECCCEEEC PISDHRALVVDISRD CCCCCCEEEEEECCC >Mature Secondary Structure MRVATFNILHGRSVHDGEVDVDRLAQSIRELDADIVALQEVDLHQPRSGTTDLTAVAAEA CEEEEEEEEECCCCCCCCCCHHHHHHHHHHHCHHEEEEECCCCCCCCCCCCHHHHHHHHH MRAVSHRFVAAIAGTPGATWMAATGREQPGTAAYGIALLSRFPAETWQVVRLPRIPVPFP HHHHHHHHEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCC MYLPGPNRVQIVNEEPRAAMVGTFDTPLGPLTVANTHLSFVPGWNRVQMRHLVRDLRGFE EECCCCCEEEEECCCCCEEEEECCCCCCCCEEEECCEEEECCCCCHHHHHHHHHHHHCCC GPRMLLGDLNMSPPTPARWARMRSLGEGLTFPAHAPDRQLDHVLTDDPRLRVEKCSAVSL CCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCEEEECCCEEEC PISDHRALVVDISRD CCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA