| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108797911
Identifier: 108797911
GI number: 108797911
Start: 1032404
End: 1033723
Strand: Reverse
Name: 108797911
Synonym: Mmcs_0937
Alternate gene names: NA
Gene position: 1033723-1032404 (Counterclockwise)
Preceding gene: 108797912
Following gene: 108797906
Centisome position: 18.12
GC content: 64.85
Gene sequence:
>1320_bases ATGCTCACCGTAGTTCACGATGCCATCGAGGCCAACGAAAGCACTGGCGGTGCTGGTCGGTCGTTGTTGGACGAGATCGT CCGCGACGGCGCCCGTCAGATGCTGGCCGCCGCGTTGCAGGCTGAGGTCGCCGCCTACGTGGCCCAGTTCGCCGATCAGC TCGATGAGAAGGGGCATCGGCTGGTGGTCCGCAACGGCTATCACCAGGTCCGCGAGGTGCTGACGGCAGCCGGGGCAGTT GAGGTGAAAGCACCGCGAGTCAACGACAAACGCGTCGACCCCGACACCGGTGAACGGAAACGGTTCTCCTCGGCGATCCT GCCGGCCTGGGCGCGCAAGTCACCGCAGATGAGCGAAGTGCTGCCGCTGCTGTACCTGCACGGGCTGTCCACCAGCGACT TCACCCCCGCTCTGGAGCAGTTCCTGGGCTCGGGGGCGGGGTTGTCGGCCTCGACGATTACCCGGCTGACCAGCCAGTGG CAGGACGAGGCGGCGGCGTTCGGGCGCCGGGATCTGTCGGGCAGCGACTACGTCTACCTGTGGGTCGATGGCATTCACCT CAAGGTGCGTCTGGACCAGGAGAAGCTGTGTCTGCTGGTGATGCTCGGCGTGCGCGCGGACGGCCGCAAAGAGCTTGTGG CGATCACCGACGGCTACCGGGAATCGACCGAGTCGTGGGCTGATCTGCTGCGCGACTGTAAACGACGCGGCATGACCGCA CCCGTGCTCGCCGTCGGCGATGGCGCACTCGGCTTCTGGAAAGCGGTACGCGAGGTGTTCCCGGCCACCAAAGAACAGCG GTGCTGGTTTCATAAGCAAGCCAATGTGCTTGCCGCCCTGCCGAAATCAGCGCACGCGTCGGCGTTGTCGGCACTCAAGG AGATCTACAACGCCGAGGATATCGACAAGGCCCAGGTCGCGGTCAAGGCCTTCACGGTCGACTTCGGGGCCAAGTACCCC AAGGCGGTCGCCAAGATCACCGACGATCTGGACACCCTACTGGAGTTCTACCACTATCCCGCCGAGCACTGGATCCACCT ACGCACGACAAATCCGATCGAAAGCACCTTTGCCACAGTACGTTTGAGAACCAAGGTCACCAAGGGGCCGGGATCACGTG CGGCTGGTCTGGCCATGGCCTACAAGCTCATCGACGCCGCCGCGGCCCGCTGGCGTGCCGTCAACGCACCACACCTGGTC GCCCTGGTCCGCGCCGGCGCGGTCTTCCACAAGGGCAAACTGCTCGAACGCCCCACCGAAATCACCCCACCGACACCGCC CTCAGACGGCGATCAGCAAGCCGGAACGGAGGTCGCCTGA
Upstream 100 bases:
>100_bases AGGGGGCGTGAAAGTGGGCGCACCTTCCCGAGGATGATCTGAATATCCGAAGGTCCGATCATGAGCCGGCGTTGGCGCGC TGGTTCGGGAAGGTACGCCC
Downstream 100 bases:
>100_bases AACACGCCGATCCACAGGTATTGACAATTCCTCCCCAGGTGGCGGTTTCGCGCTCAACCTCGCCTCGTCGGGTCCAGGAT TCCTGGCGTCGATCAGCTCG
Product: transposase, mutator type
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MLTVVHDAIEANESTGGAGRSLLDEIVRDGARQMLAAALQAEVAAYVAQFADQLDEKGHRLVVRNGYHQVREVLTAAGAV EVKAPRVNDKRVDPDTGERKRFSSAILPAWARKSPQMSEVLPLLYLHGLSTSDFTPALEQFLGSGAGLSASTITRLTSQW QDEAAAFGRRDLSGSDYVYLWVDGIHLKVRLDQEKLCLLVMLGVRADGRKELVAITDGYRESTESWADLLRDCKRRGMTA PVLAVGDGALGFWKAVREVFPATKEQRCWFHKQANVLAALPKSAHASALSALKEIYNAEDIDKAQVAVKAFTVDFGAKYP KAVAKITDDLDTLLEFYHYPAEHWIHLRTTNPIESTFATVRLRTKVTKGPGSRAAGLAMAYKLIDAAAARWRAVNAPHLV ALVRAGAVFHKGKLLERPTEITPPTPPSDGDQQAGTEVA
Sequences:
>Translated_439_residues MLTVVHDAIEANESTGGAGRSLLDEIVRDGARQMLAAALQAEVAAYVAQFADQLDEKGHRLVVRNGYHQVREVLTAAGAV EVKAPRVNDKRVDPDTGERKRFSSAILPAWARKSPQMSEVLPLLYLHGLSTSDFTPALEQFLGSGAGLSASTITRLTSQW QDEAAAFGRRDLSGSDYVYLWVDGIHLKVRLDQEKLCLLVMLGVRADGRKELVAITDGYRESTESWADLLRDCKRRGMTA PVLAVGDGALGFWKAVREVFPATKEQRCWFHKQANVLAALPKSAHASALSALKEIYNAEDIDKAQVAVKAFTVDFGAKYP KAVAKITDDLDTLLEFYHYPAEHWIHLRTTNPIESTFATVRLRTKVTKGPGSRAAGLAMAYKLIDAAAARWRAVNAPHLV ALVRAGAVFHKGKLLERPTEITPPTPPSDGDQQAGTEVA >Mature_439_residues MLTVVHDAIEANESTGGAGRSLLDEIVRDGARQMLAAALQAEVAAYVAQFADQLDEKGHRLVVRNGYHQVREVLTAAGAV EVKAPRVNDKRVDPDTGERKRFSSAILPAWARKSPQMSEVLPLLYLHGLSTSDFTPALEQFLGSGAGLSASTITRLTSQW QDEAAAFGRRDLSGSDYVYLWVDGIHLKVRLDQEKLCLLVMLGVRADGRKELVAITDGYRESTESWADLLRDCKRRGMTA PVLAVGDGALGFWKAVREVFPATKEQRCWFHKQANVLAALPKSAHASALSALKEIYNAEDIDKAQVAVKAFTVDFGAKYP KAVAKITDDLDTLLEFYHYPAEHWIHLRTTNPIESTFATVRLRTKVTKGPGSRAAGLAMAYKLIDAAAARWRAVNAPHLV ALVRAGAVFHKGKLLERPTEITPPTPPSDGDQQAGTEVA
Specific function: Required for the transposition of the insertion element [H]
COG id: COG3328
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase mutator family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001207 [H]
Pfam domain/function: PF00872 Transposase_mut [H]
EC number: NA
Molecular weight: Translated: 47943; Mature: 47943
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: PS01007 TRANSPOSASE_MUTATOR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTVVHDAIEANESTGGAGRSLLDEIVRDGARQMLAAALQAEVAAYVAQFADQLDEKGHR CCEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LVVRNGYHQVREVLTAAGAVEVKAPRVNDKRVDPDTGERKRFSSAILPAWARKSPQMSEV EEEECCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCHHHH LPLLYLHGLSTSDFTPALEQFLGSGAGLSASTITRLTSQWQDEAAAFGRRDLSGSDYVYL HHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE WVDGIHLKVRLDQEKLCLLVMLGVRADGRKELVAITDGYRESTESWADLLRDCKRRGMTA EEECEEEEEEECHHHHEEHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCC PVLAVGDGALGFWKAVREVFPATKEQRCWFHKQANVLAALPKSAHASALSALKEIYNAED CEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCC IDKAQVAVKAFTVDFGAKYPKAVAKITDDLDTLLEFYHYPAEHWIHLRTTNPIESTFATV CCHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHE RLRTKVTKGPGSRAAGLAMAYKLIDAAAARWRAVNAPHLVALVRAGAVFHKGKLLERPTE EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCCCCC ITPPTPPSDGDQQAGTEVA CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTVVHDAIEANESTGGAGRSLLDEIVRDGARQMLAAALQAEVAAYVAQFADQLDEKGHR CCEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE LVVRNGYHQVREVLTAAGAVEVKAPRVNDKRVDPDTGERKRFSSAILPAWARKSPQMSEV EEEECCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHCCHHHCCCCCHHHH LPLLYLHGLSTSDFTPALEQFLGSGAGLSASTITRLTSQWQDEAAAFGRRDLSGSDYVYL HHHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE WVDGIHLKVRLDQEKLCLLVMLGVRADGRKELVAITDGYRESTESWADLLRDCKRRGMTA EEECEEEEEEECHHHHEEHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCC PVLAVGDGALGFWKAVREVFPATKEQRCWFHKQANVLAALPKSAHASALSALKEIYNAED CEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHCCCC IDKAQVAVKAFTVDFGAKYPKAVAKITDDLDTLLEFYHYPAEHWIHLRTTNPIESTFATV CCHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHHE RLRTKVTKGPGSRAAGLAMAYKLIDAAAARWRAVNAPHLVALVRAGAVFHKGKLLERPTE EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHCCCCC ITPPTPPSDGDQQAGTEVA CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1310791 [H]