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The map label for this gene is soxC [H]

Identifier: 108797863

GI number: 108797863

Start: 980201

End: 981391

Strand: Direct

Name: soxC [H]

Synonym: Mmcs_0888

Alternate gene names: 108797863

Gene position: 980201-981391 (Clockwise)

Preceding gene: 108797862

Following gene: 108797877

Centisome position: 17.18

GC content: 69.02

Gene sequence:

>1191_bases
GTGCCACGAACACCCTGGACCGCGCCGCTGACCGCCGACGAGACCGACCGCTGGGACGCCGTCGCCGATGAGGTCGGCCA
ACTGCTCGCCCGCGACGCTCTGCAGCGCGACCGCGCCAACCAGCAACCCGACGCCGAGCTGAAATTGCTCAAGGACTCCG
GGCTGGCCAACCTGCTGATCCCGCGGGAGTTCGGTGGCCACGGCGGCCACTGGTCGACCGGTCTGCGCGCGGTGCGGATC
CTGGCGCGCCACGACGCGTCGATCGCGCAGATCCTGAGCTACCACTACTGCAATCAGGCGAGCATCGTGTTCTTCGGCGA
GCGCGCCCGCTGGGAGCGCTGGTTCACGGCATCCGCGCAGGGCAGTTGGCTGTGGGGTGACGCCGTTAACCCCGTCGACC
CCGACCTGGTACTCAGCCCTGACGGCGACGGGTATCGGCTCGACGGGCGTAAGCGGTTCGCCACCGGGGCATCGACCGGT
GACGTCACGCTGGTGATGGCCGCTCATGCCGGACGGGTGCTGGCGCTGGTGGTCGAACGTGACCGCGACGGTATCGAATT
CGCCGGCGACTGGGACGCTTTGGGCCAGCGCCTGTCGGCCAGCGGCAGCGTCGACTTCCACGATGTCGCGGTCGCGCCCG
GCGATGTGCTCGGCGAGGTGGCCGATGAACCGTACTCGACGCTCGTCACGCCTGGGGTTCAGCTCGGCTTCGGCAACCTC
TACCTGGGGATCGCCGAGGGGGCGTTGGCCCGGGCGCGGCAGTTGACGCTCGACCGCCGGGGCGCGTGGCTGCTGAGTAA
TGTCGAGCACTACTCGCGGGACCCGTTCGTGCAGAGGGTGTTCGGTGAGCTGCTGTCCCGGACCGCTGCCGTCGAGGCGC
TGGCCGACCGGTGGAACACCCGCTTCGACGCAGCCATCGCGCGGGGTGCGGACGTCACCGCCGCGGATCGAACCGAGGTG
GAGATCGGGATCGCCCAGCTCAAGGTGGTGGCCACCGAGACGGCGCTGGAGGTGGCCCACCGGGTCTACGAGGTCACCGG
GTCAAGTTCGGCGCGAAGCGAAGTGGGACTCGACCTGTTCTGGCGCAACATCCGCACCCACTCGCTGCACGACCCCGTCG
ACTACAAGAAGCTCGAGGTCGGTGCCCACTATCTGACCGGTGACGTGCAGCCGATCACCCTGTACACCTAG

Upstream 100 bases:

>100_bases
CCGACCGGATCCGCCGGCCGCGCCAGCTGTAGCTTTTCGAGTTCTGTTCCGGCCGAGCAGAAGTCGTGACCGTCGGCGTG
ATCTTCCATAGCGTGGCCCG

Downstream 100 bases:

>100_bases
CGCGTCCGACTTGCGTAACGCCATGGCGGTTCTCGCGGGGATACTCCGCCGTGGCGTTACGTAAGTCGGGGCAGCCTCAG
ATTTGGCCGTGGCGCGGAGG

Product: acyl-CoA dehydrogenase, type 2-like protein

Products: NA

Alternate protein names: DBT sulfur dioxygenase [H]

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MPRTPWTAPLTADETDRWDAVADEVGQLLARDALQRDRANQQPDAELKLLKDSGLANLLIPREFGGHGGHWSTGLRAVRI
LARHDASIAQILSYHYCNQASIVFFGERARWERWFTASAQGSWLWGDAVNPVDPDLVLSPDGDGYRLDGRKRFATGASTG
DVTLVMAAHAGRVLALVVERDRDGIEFAGDWDALGQRLSASGSVDFHDVAVAPGDVLGEVADEPYSTLVTPGVQLGFGNL
YLGIAEGALARARQLTLDRRGAWLLSNVEHYSRDPFVQRVFGELLSRTAAVEALADRWNTRFDAAIARGADVTAADRTEV
EIGIAQLKVVATETALEVAHRVYEVTGSSSARSEVGLDLFWRNIRTHSLHDPVDYKKLEVGAHYLTGDVQPITLYT

Sequences:

>Translated_396_residues
MPRTPWTAPLTADETDRWDAVADEVGQLLARDALQRDRANQQPDAELKLLKDSGLANLLIPREFGGHGGHWSTGLRAVRI
LARHDASIAQILSYHYCNQASIVFFGERARWERWFTASAQGSWLWGDAVNPVDPDLVLSPDGDGYRLDGRKRFATGASTG
DVTLVMAAHAGRVLALVVERDRDGIEFAGDWDALGQRLSASGSVDFHDVAVAPGDVLGEVADEPYSTLVTPGVQLGFGNL
YLGIAEGALARARQLTLDRRGAWLLSNVEHYSRDPFVQRVFGELLSRTAAVEALADRWNTRFDAAIARGADVTAADRTEV
EIGIAQLKVVATETALEVAHRVYEVTGSSSARSEVGLDLFWRNIRTHSLHDPVDYKKLEVGAHYLTGDVQPITLYT
>Mature_395_residues
PRTPWTAPLTADETDRWDAVADEVGQLLARDALQRDRANQQPDAELKLLKDSGLANLLIPREFGGHGGHWSTGLRAVRIL
ARHDASIAQILSYHYCNQASIVFFGERARWERWFTASAQGSWLWGDAVNPVDPDLVLSPDGDGYRLDGRKRFATGASTGD
VTLVMAAHAGRVLALVVERDRDGIEFAGDWDALGQRLSASGSVDFHDVAVAPGDVLGEVADEPYSTLVTPGVQLGFGNLY
LGIAEGALARARQLTLDRRGAWLLSNVEHYSRDPFVQRVFGELLSRTAAVEALADRWNTRFDAAIARGADVTAADRTEVE
IGIAQLKVVATETALEVAHRVYEVTGSSSARSEVGLDLFWRNIRTHSLHDPVDYKKLEVGAHYLTGDVQPITLYT

Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI76496475, Length=395, Percent_Identity=23.0379746835443, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI4557235, Length=395, Percent_Identity=23.0379746835443, Blast_Score=72, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006092
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43351; Mature: 43220

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRTPWTAPLTADETDRWDAVADEVGQLLARDALQRDRANQQPDAELKLLKDSGLANLLI
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEE
PREFGGHGGHWSTGLRAVRILARHDASIAQILSYHYCNQASIVFFGERARWERWFTASAQ
ECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCHHEEECCCC
GSWLWGDAVNPVDPDLVLSPDGDGYRLDGRKRFATGASTGDVTLVMAAHAGRVLALVVER
CCEEECCCCCCCCCCEEECCCCCCEEECCCEEEECCCCCCCEEEEEEECCCEEEEEEEEC
DRDGIEFAGDWDALGQRLSASGSVDFHDVAVAPGDVLGEVADEPYSTLVTPGVQLGFGNL
CCCCCEECCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCHHHHCCCCEEECCCCE
YLGIAEGALARARQLTLDRRGAWLLSNVEHYSRDPFVQRVFGELLSRTAAVEALADRWNT
EEEEHHHHHHHHHHHHHCCCCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
RFDAAIARGADVTAADRTEVEIGIAQLKVVATETALEVAHRVYEVTGSSSARSEVGLDLF
HHHHHHHCCCCCCCCCCCEEEEEHHHEEEEHHHHHHHHHHHHHHHCCCCCCHHHCCHHHH
WRNIRTHSLHDPVDYKKLEVGAHYLTGDVQPITLYT
HHHCCCCCCCCCCCCCEEECCCEEECCCCEEEEEEC
>Mature Secondary Structure 
PRTPWTAPLTADETDRWDAVADEVGQLLARDALQRDRANQQPDAELKLLKDSGLANLLI
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEE
PREFGGHGGHWSTGLRAVRILARHDASIAQILSYHYCNQASIVFFGERARWERWFTASAQ
ECCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEECCCCCHHEEECCCC
GSWLWGDAVNPVDPDLVLSPDGDGYRLDGRKRFATGASTGDVTLVMAAHAGRVLALVVER
CCEEECCCCCCCCCCEEECCCCCCEEECCCEEEECCCCCCCEEEEEEECCCEEEEEEEEC
DRDGIEFAGDWDALGQRLSASGSVDFHDVAVAPGDVLGEVADEPYSTLVTPGVQLGFGNL
CCCCCEECCCHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHCCCHHHHCCCCEEECCCCE
YLGIAEGALARARQLTLDRRGAWLLSNVEHYSRDPFVQRVFGELLSRTAAVEALADRWNT
EEEEHHHHHHHHHHHHHCCCCCHHHHCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
RFDAAIARGADVTAADRTEVEIGIAQLKVVATETALEVAHRVYEVTGSSSARSEVGLDLF
HHHHHHHCCCCCCCCCCCEEEEEHHHEEEEHHHHHHHHHHHHHHHCCCCCCHHHCCHHHH
WRNIRTHSLHDPVDYKKLEVGAHYLTGDVQPITLYT
HHHCCCCCCCCCCCCCEEECCCEEECCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7961424; 7574582 [H]