| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is ydfG [H]
Identifier: 108797857
GI number: 108797857
Start: 975291
End: 975746
Strand: Direct
Name: ydfG [H]
Synonym: Mmcs_0882
Alternate gene names: 108797857
Gene position: 975291-975746 (Clockwise)
Preceding gene: 108797856
Following gene: 108797858
Centisome position: 17.09
GC content: 68.64
Gene sequence:
>456_bases ATGGGTACCCGGCACCTCCACATCGACAAGCAGTCACCTTCGGCGTACAAGGCGCTGATCGGCGTCTCGACCGCCGTCAC CGCGCTGGCCGAGGAGACCGGGCTGCCGCGCAGCCTGGTCGAACTCGTCAACGTGCGGGTGTCCCAGCTCAACGGCTGCG CCTCGTGCCTCGACGTGCACCACCGCCGCGCCGACGACGCCGGCGTGAGCGCCAAACAACTCGCGACGGTGTCGGTCTGG CGTGACACCGAACTATTCGACGAGCGCGAACAGGCCGCCCTGCGCCTGGCCGAGATCGCCACCACGCTGCCCGACCACGA CACCGCCGAACGCGAATACGCCCGTGCCCGTGACGTGCTCAGCGACGACGAACTGTCCGCCGTCATCTGGGTCGCGACCA CGATCAACGCCTTCAACCGCGTCTCGATCCTGAGCGGCCACACCGTCCGCGCGTGA
Upstream 100 bases:
>100_bases TGGCCTTCCTGATCGGGCTGTTCTCCAGCGCGATCATCCTGGGCACCGTCTGCTGACCGGCTTCGGCCGAACATCGCGCG ATGCTGCGTAGCATCGGGCG
Downstream 100 bases:
>100_bases CGCCTTCAAGATCGCGCTGAGTTTTACCCTCGCCGCCCGCCGACGGCGTTTGTACCGTCGCCCGTCGTGACTCCTCCTGC CTTCACGCGTCGACGCGCCC
Product: alkylhydroperoxidase AhpD core
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MGTRHLHIDKQSPSAYKALIGVSTAVTALAEETGLPRSLVELVNVRVSQLNGCASCLDVHHRRADDAGVSAKQLATVSVW RDTELFDEREQAALRLAEIATTLPDHDTAEREYARARDVLSDDELSAVIWVATTINAFNRVSILSGHTVRA
Sequences:
>Translated_151_residues MGTRHLHIDKQSPSAYKALIGVSTAVTALAEETGLPRSLVELVNVRVSQLNGCASCLDVHHRRADDAGVSAKQLATVSVW RDTELFDEREQAALRLAEIATTLPDHDTAEREYARARDVLSDDELSAVIWVATTINAFNRVSILSGHTVRA >Mature_150_residues GTRHLHIDKQSPSAYKALIGVSTAVTALAEETGLPRSLVELVNVRVSQLNGCASCLDVHHRRADDAGVSAKQLATVSVWR DTELFDEREQAALRLAEIATTLPDHDTAEREYARARDVLSDDELSAVIWVATTINAFNRVSILSGHTVRA
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004675 - InterPro: IPR003779 [H]
Pfam domain/function: PF02627 CMD [H]
EC number: NA
Molecular weight: Translated: 16474; Mature: 16342
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTRHLHIDKQSPSAYKALIGVSTAVTALAEETGLPRSLVELVNVRVSQLNGCASCLDVH CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH HRRADDAGVSAKQLATVSVWRDTELFDEREQAALRLAEIATTLPDHDTAEREYARARDVL HHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC SDDELSAVIWVATTINAFNRVSILSGHTVRA CCCCHHEEEHHHHHHHHHHHEEEECCCCCCC >Mature Secondary Structure GTRHLHIDKQSPSAYKALIGVSTAVTALAEETGLPRSLVELVNVRVSQLNGCASCLDVH CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH HRRADDAGVSAKQLATVSVWRDTELFDEREQAALRLAEIATTLPDHDTAEREYARARDVL HHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC SDDELSAVIWVATTINAFNRVSILSGHTVRA CCCCHHEEEHHHHHHHHHHHEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]