Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

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The map label for this gene is ydfG [H]

Identifier: 108797857

GI number: 108797857

Start: 975291

End: 975746

Strand: Direct

Name: ydfG [H]

Synonym: Mmcs_0882

Alternate gene names: 108797857

Gene position: 975291-975746 (Clockwise)

Preceding gene: 108797856

Following gene: 108797858

Centisome position: 17.09

GC content: 68.64

Gene sequence:

>456_bases
ATGGGTACCCGGCACCTCCACATCGACAAGCAGTCACCTTCGGCGTACAAGGCGCTGATCGGCGTCTCGACCGCCGTCAC
CGCGCTGGCCGAGGAGACCGGGCTGCCGCGCAGCCTGGTCGAACTCGTCAACGTGCGGGTGTCCCAGCTCAACGGCTGCG
CCTCGTGCCTCGACGTGCACCACCGCCGCGCCGACGACGCCGGCGTGAGCGCCAAACAACTCGCGACGGTGTCGGTCTGG
CGTGACACCGAACTATTCGACGAGCGCGAACAGGCCGCCCTGCGCCTGGCCGAGATCGCCACCACGCTGCCCGACCACGA
CACCGCCGAACGCGAATACGCCCGTGCCCGTGACGTGCTCAGCGACGACGAACTGTCCGCCGTCATCTGGGTCGCGACCA
CGATCAACGCCTTCAACCGCGTCTCGATCCTGAGCGGCCACACCGTCCGCGCGTGA

Upstream 100 bases:

>100_bases
TGGCCTTCCTGATCGGGCTGTTCTCCAGCGCGATCATCCTGGGCACCGTCTGCTGACCGGCTTCGGCCGAACATCGCGCG
ATGCTGCGTAGCATCGGGCG

Downstream 100 bases:

>100_bases
CGCCTTCAAGATCGCGCTGAGTTTTACCCTCGCCGCCCGCCGACGGCGTTTGTACCGTCGCCCGTCGTGACTCCTCCTGC
CTTCACGCGTCGACGCGCCC

Product: alkylhydroperoxidase AhpD core

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MGTRHLHIDKQSPSAYKALIGVSTAVTALAEETGLPRSLVELVNVRVSQLNGCASCLDVHHRRADDAGVSAKQLATVSVW
RDTELFDEREQAALRLAEIATTLPDHDTAEREYARARDVLSDDELSAVIWVATTINAFNRVSILSGHTVRA

Sequences:

>Translated_151_residues
MGTRHLHIDKQSPSAYKALIGVSTAVTALAEETGLPRSLVELVNVRVSQLNGCASCLDVHHRRADDAGVSAKQLATVSVW
RDTELFDEREQAALRLAEIATTLPDHDTAEREYARARDVLSDDELSAVIWVATTINAFNRVSILSGHTVRA
>Mature_150_residues
GTRHLHIDKQSPSAYKALIGVSTAVTALAEETGLPRSLVELVNVRVSQLNGCASCLDVHHRRADDAGVSAKQLATVSVWR
DTELFDEREQAALRLAEIATTLPDHDTAEREYARARDVLSDDELSAVIWVATTINAFNRVSILSGHTVRA

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 16474; Mature: 16342

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTRHLHIDKQSPSAYKALIGVSTAVTALAEETGLPRSLVELVNVRVSQLNGCASCLDVH
CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HRRADDAGVSAKQLATVSVWRDTELFDEREQAALRLAEIATTLPDHDTAEREYARARDVL
HHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
SDDELSAVIWVATTINAFNRVSILSGHTVRA
CCCCHHEEEHHHHHHHHHHHEEEECCCCCCC
>Mature Secondary Structure 
GTRHLHIDKQSPSAYKALIGVSTAVTALAEETGLPRSLVELVNVRVSQLNGCASCLDVH
CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
HRRADDAGVSAKQLATVSVWRDTELFDEREQAALRLAEIATTLPDHDTAEREYARARDVL
HHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCC
SDDELSAVIWVATTINAFNRVSILSGHTVRA
CCCCHHEEEHHHHHHHHHHHEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]