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The map label for this gene is ydhM [C]

Identifier: 108797849

GI number: 108797849

Start: 969380

End: 970021

Strand: Direct

Name: ydhM [C]

Synonym: Mmcs_0874

Alternate gene names: 108797849

Gene position: 969380-970021 (Clockwise)

Preceding gene: 108797848

Following gene: 108797850

Centisome position: 16.99

GC content: 70.72

Gene sequence:

>642_bases
ATGGAACGCCGGCTGACCCCCAAGGGGCAGGCCACCCGCGAGCGCATCCTCACCGCTGCCGCCGACCTGATTGCCGCCGA
AGGGCTTTCGGCGCTCAACATGGTCAGCCTCCGTAAGGCGGCAGCGGTGAGCGGCTCACAGCTGGCGCATTACTTCGCCG
ACAAGCAGACCCTGCTGCGGGCCCTGGTCGAGCGCCAGATGCAGGCCGTCGACTTCCAGGTGGAGAGCTTCGAGGACGCC
GAACGCTGGCTCGACCGGAACATGCGCGACCTGCGCCGCATCGGTTTCACCGGCACCCCCACCTACCACGGTCTGGCCGG
TCAGCTCGCCAAGTCCGACGACGCGACCCGCGAGGCCCTGGCCGACGGGTACCGGCGGTGGATCTCGGTGCTGGAAGCGG
CATTCGAGACGATGAAACGCAATGGTCTGCTGGTCGACGACGCCCACCCTCGCGAACTCGCGCAGGTGTTCGTCGCCGCC
CACCAGGCCGGCGGCACGTTGGCGTTCGCCTATCGCGAGGACTGGCCGCAGGCCGATGCCCTGCGCTTCGCGGTCAACCG
GCTGCGCATGTTCGCCGCCGACCCGGCCGAGCGCACACCTCGGCCGGCCCGGCGGCCGCGCCACCGCCGGAGGACCGCGT
GA

Upstream 100 bases:

>100_bases
TGGAGTCGGCGCTCGACGAGACGGCGGCGTTGATCCGCGACTTCCTGGAGCGCCGGCTGCCTGCGCCGTGACGGGTGCGT
CTGGCCGGTAACCTGGAGCG

Downstream 100 bases:

>100_bases
CGACGTTCAGCGGTAAGGGCCTGGCGACCCGCGCCCGCATCGTCGACACCACCGCCCGGCTGATGTTCGAACGCGGCATC
GAGAACACCACGATGGAGGA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulatory Protein; Transcriptional Regulator; Regulatory Protein TetR; TetR Family Receptor Protein; Transcriptional Regulator TetR Family; Transcriptional Regulator TetR Family Protein; Transcription Regulator

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MERRLTPKGQATRERILTAAADLIAAEGLSALNMVSLRKAAAVSGSQLAHYFADKQTLLRALVERQMQAVDFQVESFEDA
ERWLDRNMRDLRRIGFTGTPTYHGLAGQLAKSDDATREALADGYRRWISVLEAAFETMKRNGLLVDDAHPRELAQVFVAA
HQAGGTLAFAYREDWPQADALRFAVNRLRMFAADPAERTPRPARRPRHRRRTA

Sequences:

>Translated_213_residues
MERRLTPKGQATRERILTAAADLIAAEGLSALNMVSLRKAAAVSGSQLAHYFADKQTLLRALVERQMQAVDFQVESFEDA
ERWLDRNMRDLRRIGFTGTPTYHGLAGQLAKSDDATREALADGYRRWISVLEAAFETMKRNGLLVDDAHPRELAQVFVAA
HQAGGTLAFAYREDWPQADALRFAVNRLRMFAADPAERTPRPARRPRHRRRTA
>Mature_213_residues
MERRLTPKGQATRERILTAAADLIAAEGLSALNMVSLRKAAAVSGSQLAHYFADKQTLLRALVERQMQAVDFQVESFEDA
ERWLDRNMRDLRRIGFTGTPTYHGLAGQLAKSDDATREALADGYRRWISVLEAAFETMKRNGLLVDDAHPRELAQVFVAA
HQAGGTLAFAYREDWPQADALRFAVNRLRMFAADPAERTPRPARRPRHRRRTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24016; Mature: 24016

Theoretical pI: Translated: 10.73; Mature: 10.73

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRLTPKGQATRERILTAAADLIAAEGLSALNMVSLRKAAAVSGSQLAHYFADKQTLLR
CCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVERQMQAVDFQVESFEDAERWLDRNMRDLRRIGFTGTPTYHGLAGQLAKSDDATREAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHH
ADGYRRWISVLEAAFETMKRNGLLVDDAHPRELAQVFVAAHQAGGTLAFAYREDWPQADA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH
LRFAVNRLRMFAADPAERTPRPARRPRHRRRTA
HHHHHHHHHHHHCCCHHCCCCCCCCCHHHCCCC
>Mature Secondary Structure
MERRLTPKGQATRERILTAAADLIAAEGLSALNMVSLRKAAAVSGSQLAHYFADKQTLLR
CCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALVERQMQAVDFQVESFEDAERWLDRNMRDLRRIGFTGTPTYHGLAGQLAKSDDATREAL
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHH
ADGYRRWISVLEAAFETMKRNGLLVDDAHPRELAQVFVAAHQAGGTLAFAYREDWPQADA
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHH
LRFAVNRLRMFAADPAERTPRPARRPRHRRRTA
HHHHHHHHHHHHCCCHHCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA