| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108797826
Identifier: 108797826
GI number: 108797826
Start: 940262
End: 941551
Strand: Reverse
Name: 108797826
Synonym: Mmcs_0851
Alternate gene names: NA
Gene position: 941551-940262 (Counterclockwise)
Preceding gene: 108797827
Following gene: 108797825
Centisome position: 16.5
GC content: 67.83
Gene sequence:
>1290_bases ATGGGCAAGCGCAACCGCCAGCGGCGGACGGCCAAGCAGAAGCACCGGCGCCGGTCGACACCGAGAAGCGAATACAGCCG GCCTGACCCGGAGCCAGATCGCGCGCAGTTGCTCGAACGCCTCGTCATTGCAGTGAGTACGGCTGCGGGTATGCCCACAC CGTGGCGCGCAAACGAACTCTTGGAGCAGTCCCGCGGTTACGAGCGCGAACTCGACGTCGCCGCCGACCTCGCCGTACAG GCGGCGATCCGAGCAGCCTGGGAGCGCGGGTGGTCGCCGACGGATCTGCACGAGGTTGCGCGCCGCCGAGTGGAGGCGCC CGCCGTGTGCTACCTCGACGAGGCCATCGCGCTCGAGTCACTGCGGTACTCGGTGGCGACGCTGCACCCACGGTGGCGCG CCGAGCTCGCCGACATCTCGACCGGGCCGGCGCCGTCCGCGCCACAGATGTGGCGTTGGGCGGCTTCGCGTTCGGTGGAT CACCGCACTGCCCTGACCGTCGTTCTTCAGGTGTTGCACCTGCTAGGCACGATTCCTCGGATCGACGCACTGCTTCCGCT GCCGGGCTCACGCAATCAGCTGACCGATGGAGTGGGCGAGGTCGACGAGAAGATCCTCGCCCGGGTGCGCGCGCTGCTGG CCAAGGCCGAGTCCACCGAGTACCCCGACGAGGCCGAGGCGCTGTCGGCCAAGGCGCAGGCACTCATGATCCGACACTCG TTGCAGGGAGCGGTAGCCGATCACGACGATGGGCGAGCACCCCTCGTCAGTTCACGCCGAATCTGGATCGACAATCCGTA TGTGGCTGCGAAGGTGGCGCTGGTGCAGACCGTCGCCCAGGCGAATCGGTGCCGCACCGTGTGGATCAAAGACCTTGGTT GCGTCGTGGCCGTGGGTTCGGAGACCGACCTGAACCTCGTCGAACTGCTCACCACGTCGCTGCTGGTGCAGGCGACGCGG GCGATGTTGACCGGAGGACGCCAGAACGGTGTTCGGGGTCAGTCGAACACGAAGTCGTTCCGGTTCTCCTTCCTGGTCGC CTATGCCGGCCGCATCGGCGAACGGCTCACCGCCACCAATTCCTCTGTTACCGAGGAACTGCAACGCGACAACCGGCGGT TGCTGCCGGTACTGGTCGCGCAGAACCGGGCGGCCGACGCGGAATTCGCTCGGCTCTTCCCGGGAGTGGTGGCTACTCCG CTGGCCGCCTACGACTCCGTCGGCCTGGGCGCCGGGCGCTCGGCGGCGGACATGGCGACTCTCGACGTCCGAGACGCGAT CGCGGGCTGA
Upstream 100 bases:
>100_bases GTACTCGTCGAGGCCGAACGTCGTCGGCATCGGGGTCTCCCGGCGGTGCTCCGCGTTCGGCCGCCGAGTGCTGTCGGACC CCTGCGCCAGACTTCTGGGC
Downstream 100 bases:
>100_bases GTACCTGATGATGAGCATCCGTAGCCGCTGACGTCGTCGGTGTAGGCGTACTGGAAGAGCGGCTCGAGGGTCTCGACGGC GAGGAGGCACTGCAGGACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 429; Mature: 428
Protein sequence:
>429_residues MGKRNRQRRTAKQKHRRRSTPRSEYSRPDPEPDRAQLLERLVIAVSTAAGMPTPWRANELLEQSRGYERELDVAADLAVQ AAIRAAWERGWSPTDLHEVARRRVEAPAVCYLDEAIALESLRYSVATLHPRWRAELADISTGPAPSAPQMWRWAASRSVD HRTALTVVLQVLHLLGTIPRIDALLPLPGSRNQLTDGVGEVDEKILARVRALLAKAESTEYPDEAEALSAKAQALMIRHS LQGAVADHDDGRAPLVSSRRIWIDNPYVAAKVALVQTVAQANRCRTVWIKDLGCVVAVGSETDLNLVELLTTSLLVQATR AMLTGGRQNGVRGQSNTKSFRFSFLVAYAGRIGERLTATNSSVTEELQRDNRRLLPVLVAQNRAADAEFARLFPGVVATP LAAYDSVGLGAGRSAADMATLDVRDAIAG
Sequences:
>Translated_429_residues MGKRNRQRRTAKQKHRRRSTPRSEYSRPDPEPDRAQLLERLVIAVSTAAGMPTPWRANELLEQSRGYERELDVAADLAVQ AAIRAAWERGWSPTDLHEVARRRVEAPAVCYLDEAIALESLRYSVATLHPRWRAELADISTGPAPSAPQMWRWAASRSVD HRTALTVVLQVLHLLGTIPRIDALLPLPGSRNQLTDGVGEVDEKILARVRALLAKAESTEYPDEAEALSAKAQALMIRHS LQGAVADHDDGRAPLVSSRRIWIDNPYVAAKVALVQTVAQANRCRTVWIKDLGCVVAVGSETDLNLVELLTTSLLVQATR AMLTGGRQNGVRGQSNTKSFRFSFLVAYAGRIGERLTATNSSVTEELQRDNRRLLPVLVAQNRAADAEFARLFPGVVATP LAAYDSVGLGAGRSAADMATLDVRDAIAG >Mature_428_residues GKRNRQRRTAKQKHRRRSTPRSEYSRPDPEPDRAQLLERLVIAVSTAAGMPTPWRANELLEQSRGYERELDVAADLAVQA AIRAAWERGWSPTDLHEVARRRVEAPAVCYLDEAIALESLRYSVATLHPRWRAELADISTGPAPSAPQMWRWAASRSVDH RTALTVVLQVLHLLGTIPRIDALLPLPGSRNQLTDGVGEVDEKILARVRALLAKAESTEYPDEAEALSAKAQALMIRHSL QGAVADHDDGRAPLVSSRRIWIDNPYVAAKVALVQTVAQANRCRTVWIKDLGCVVAVGSETDLNLVELLTTSLLVQATRA MLTGGRQNGVRGQSNTKSFRFSFLVAYAGRIGERLTATNSSVTEELQRDNRRLLPVLVAQNRAADAEFARLFPGVVATPL AAYDSVGLGAGRSAADMATLDVRDAIAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46988; Mature: 46857
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKRNRQRRTAKQKHRRRSTPRSEYSRPDPEPDRAQLLERLVIAVSTAAGMPTPWRANEL CCCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH LEQSRGYERELDVAADLAVQAAIRAAWERGWSPTDLHEVARRRVEAPAVCYLDEAIALES HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHH LRYSVATLHPRWRAELADISTGPAPSAPQMWRWAASRSVDHRTALTVVLQVLHLLGTIPR HHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH IDALLPLPGSRNQLTDGVGEVDEKILARVRALLAKAESTEYPDEAEALSAKAQALMIRHS HHHEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LQGAVADHDDGRAPLVSSRRIWIDNPYVAAKVALVQTVAQANRCRTVWIKDLGCVVAVGS HHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECC ETDLNLVELLTTSLLVQATRAMLTGGRQNGVRGQSNTKSFRFSFLVAYAGRIGERLTATN CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC SSVTEELQRDNRRLLPVLVAQNRAADAEFARLFPGVVATPLAAYDSVGLGAGRSAADMAT HHHHHHHHHCCCCEEHHHEECCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHH LDVRDAIAG HHHHHHHCC >Mature Secondary Structure GKRNRQRRTAKQKHRRRSTPRSEYSRPDPEPDRAQLLERLVIAVSTAAGMPTPWRANEL CCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHH LEQSRGYERELDVAADLAVQAAIRAAWERGWSPTDLHEVARRRVEAPAVCYLDEAIALES HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEHHHHHHHHHH LRYSVATLHPRWRAELADISTGPAPSAPQMWRWAASRSVDHRTALTVVLQVLHLLGTIPR HHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHH IDALLPLPGSRNQLTDGVGEVDEKILARVRALLAKAESTEYPDEAEALSAKAQALMIRHS HHHEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH LQGAVADHDDGRAPLVSSRRIWIDNPYVAAKVALVQTVAQANRCRTVWIKDLGCVVAVGS HHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEEEEEECCCEEEEECC ETDLNLVELLTTSLLVQATRAMLTGGRQNGVRGQSNTKSFRFSFLVAYAGRIGERLTATN CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC SSVTEELQRDNRRLLPVLVAQNRAADAEFARLFPGVVATPLAAYDSVGLGAGRSAADMAT HHHHHHHHHCCCCEEHHHEECCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHH LDVRDAIAG HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA