BacMap

Definition	Mycobacterium sp. MCS chromosome, complete genome.
Accession	NC_008146
Length	5,705,448

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The map label for this gene is yjgI [H]

Identifier: 108797811

GI number: 108797811

Start: 923714

End: 924460

Strand: Direct

Name: yjgI [H]

Synonym: Mmcs_0834

Alternate gene names: 108797811

Gene position: 923714-924460 (Clockwise)

Preceding gene: 108797809

Following gene: 108797812

Centisome position: 16.19

GC content: 69.34

Gene sequence:

>747_bases
ATGAGCACAGCACCCCTGACCGGACGGCGGGCACTGGTGACCGGAGGGTCGCGCGGGATCGGCGCGGAGATCGTGCGGCG
ACTGGCCGCCGACGGCGCCGCGGTGGCGTTCACCTACTCGGCGTCCGGCACGAACGCGGAGAAACTCGTGGCCGAGGTGG
CTGCGGACGGTGGCACGGCGGTGGCCATTCAGGCGGATGCAGCCGATCCGGCGCAGACTGCGGCCGCCGTCGACCGTGCG
GTCGCCGAACTCGGCGGCCTGGACATCGTGGTGAACAACGCCGCCGTCGCGCACATCGCGCCATTCGACGAGTTCCCGGC
CGAACAGTTCGACCGTCTGGTGGCCATCAACATCGGTGGCATGTACTGGACCACCCGCACCGCGATCAAGCACCTGGGTG
AGGGTGGGCGGATCATCAACATCGGCAGCATCAACGCCGACCGCATTCCCGGGCCCGGACTGTCGGTCTACGGCATGACC
AAGGGGGCGGTGGCGTCGTTCACCCGCGGACTGGCCCGCGACCTCGGCGCGAGCGGCATCACCGTCAACAACGTGCAGCC
CGGGCCGATCGACACCGACGCCAACCCCGACAACGGCGACTTCGCCGAGAGTCTCAAGCAGGTCACCACGCAGGGCCGCT
ACGGGCACACCACCGACGTCGCCTCGTTCGTGAGCTTCCTGGCCGGCCCGGAGTCCGGATACATCACGGGCGCGAACCTG
AACGTCGACGGCGGCTTCACCGTCTGA

Upstream 100 bases:

>100_bases
TGTGATGCCGGTCACATCGGGAATGCTGCCCCGTGAATACCGGCTTGACCTCAGCGTACTAAGTAACACATCGGTTCGTA
ATTACGAGGAGGCCATCGAG

Downstream 100 bases:

>100_bases
CGGCGGTTGGTGTAAGCGGCCCGAAGCGTCGGGTCGGACCTGATTTGGTACTGGTTTCGGTACCAAATCAGGTAGCGTTG
CCGTATGCCTTCGCTGAACG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MSTAPLTGRRALVTGGSRGIGAEIVRRLAADGAAVAFTYSASGTNAEKLVAEVAADGGTAVAIQADAADPAQTAAAVDRA
VAELGGLDIVVNNAAVAHIAPFDEFPAEQFDRLVAINIGGMYWTTRTAIKHLGEGGRIINIGSINADRIPGPGLSVYGMT
KGAVASFTRGLARDLGASGITVNNVQPGPIDTDANPDNGDFAESLKQVTTQGRYGHTTDVASFVSFLAGPESGYITGANL
NVDGGFTV

Sequences:

>Translated_248_residues
MSTAPLTGRRALVTGGSRGIGAEIVRRLAADGAAVAFTYSASGTNAEKLVAEVAADGGTAVAIQADAADPAQTAAAVDRA
VAELGGLDIVVNNAAVAHIAPFDEFPAEQFDRLVAINIGGMYWTTRTAIKHLGEGGRIINIGSINADRIPGPGLSVYGMT
KGAVASFTRGLARDLGASGITVNNVQPGPIDTDANPDNGDFAESLKQVTTQGRYGHTTDVASFVSFLAGPESGYITGANL
NVDGGFTV
>Mature_247_residues
STAPLTGRRALVTGGSRGIGAEIVRRLAADGAAVAFTYSASGTNAEKLVAEVAADGGTAVAIQADAADPAQTAAAVDRAV
AELGGLDIVVNNAAVAHIAPFDEFPAEQFDRLVAINIGGMYWTTRTAIKHLGEGGRIINIGSINADRIPGPGLSVYGMTK
GAVASFTRGLARDLGASGITVNNVQPGPIDTDANPDNGDFAESLKQVTTQGRYGHTTDVASFVSFLAGPESGYITGANLN
VDGGFTV

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI32483357, Length=250, Percent_Identity=33.2, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI7705925, Length=247, Percent_Identity=34.0080971659919, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI5031737, Length=244, Percent_Identity=31.1475409836066, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI40254992, Length=238, Percent_Identity=32.3529411764706, Blast_Score=98, Evalue=8e-21,
Organism=Homo sapiens, GI10190704, Length=250, Percent_Identity=33.2, Blast_Score=94, Evalue=8e-20,
Organism=Homo sapiens, GI15277342, Length=247, Percent_Identity=31.1740890688259, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI19923817, Length=252, Percent_Identity=26.984126984127, Blast_Score=83, Evalue=3e-16,
Organism=Homo sapiens, GI40254986, Length=196, Percent_Identity=29.0816326530612, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI126723750, Length=250, Percent_Identity=27.6, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI31542939, Length=237, Percent_Identity=28.2700421940928, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=31.5789473684211, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI59889578, Length=207, Percent_Identity=32.3671497584541, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI4503301, Length=204, Percent_Identity=28.4313725490196, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI126723191, Length=188, Percent_Identity=31.9148936170213, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI109715829, Length=194, Percent_Identity=29.8969072164948, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI7706318, Length=231, Percent_Identity=26.4069264069264, Blast_Score=67, Evalue=1e-11,
Organism=Escherichia coli, GI2367365, Length=241, Percent_Identity=45.643153526971, Blast_Score=190, Evalue=7e-50,
Organism=Escherichia coli, GI87082100, Length=255, Percent_Identity=33.7254901960784, Blast_Score=130, Evalue=6e-32,
Organism=Escherichia coli, GI1789378, Length=251, Percent_Identity=35.0597609561753, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1788459, Length=242, Percent_Identity=31.404958677686, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI2367175, Length=247, Percent_Identity=33.6032388663968, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787335, Length=243, Percent_Identity=33.7448559670782, Blast_Score=114, Evalue=5e-27,
Organism=Escherichia coli, GI1790717, Length=248, Percent_Identity=28.6290322580645, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI1789208, Length=257, Percent_Identity=31.1284046692607, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1787905, Length=244, Percent_Identity=31.5573770491803, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI87082160, Length=258, Percent_Identity=31.3953488372093, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1786812, Length=256, Percent_Identity=28.125, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1789057, Length=254, Percent_Identity=29.5275590551181, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1787820, Length=183, Percent_Identity=32.7868852459016, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787545, Length=260, Percent_Identity=28.0769230769231, Blast_Score=72, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17562906, Length=265, Percent_Identity=32.8301886792453, Blast_Score=110, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI71994600, Length=252, Percent_Identity=33.3333333333333, Blast_Score=107, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=29.7619047619048, Blast_Score=103, Evalue=8e-23,
Organism=Caenorhabditis elegans, GI17562908, Length=265, Percent_Identity=32.4528301886792, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71994604, Length=249, Percent_Identity=30.1204819277108, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17531453, Length=264, Percent_Identity=33.7121212121212, Blast_Score=99, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI25147288, Length=253, Percent_Identity=32.4110671936759, Blast_Score=97, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17561402, Length=255, Percent_Identity=32.5490196078431, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI193204405, Length=265, Percent_Identity=32.0754716981132, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17562910, Length=265, Percent_Identity=28.3018867924528, Blast_Score=94, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI115534694, Length=248, Percent_Identity=31.0483870967742, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17560220, Length=264, Percent_Identity=32.5757575757576, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17555706, Length=247, Percent_Identity=29.1497975708502, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI17536651, Length=254, Percent_Identity=29.5275590551181, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17559104, Length=262, Percent_Identity=30.9160305343511, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI71982365, Length=198, Percent_Identity=29.7979797979798, Blast_Score=85, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI17560150, Length=265, Percent_Identity=29.0566037735849, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17508651, Length=256, Percent_Identity=30.46875, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17536025, Length=253, Percent_Identity=29.6442687747036, Blast_Score=83, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17562990, Length=262, Percent_Identity=28.2442748091603, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=26.7441860465116, Blast_Score=78, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17560332, Length=270, Percent_Identity=27.7777777777778, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17544670, Length=260, Percent_Identity=25.7692307692308, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=267, Percent_Identity=26.9662921348315, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17558628, Length=191, Percent_Identity=31.9371727748691, Blast_Score=74, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=264, Percent_Identity=29.1666666666667, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17563726, Length=259, Percent_Identity=28.5714285714286, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17565030, Length=266, Percent_Identity=28.9473684210526, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17561272, Length=214, Percent_Identity=27.1028037383178, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17538182, Length=261, Percent_Identity=28.3524904214559, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=267, Percent_Identity=26.9662921348315, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI72000259, Length=259, Percent_Identity=27.4131274131274, Blast_Score=69, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6324126, Length=248, Percent_Identity=27.4193548387097, Blast_Score=70, Evalue=4e-13,
Organism=Drosophila melanogaster, GI28571526, Length=246, Percent_Identity=35.3658536585366, Blast_Score=120, Evalue=8e-28,
Organism=Drosophila melanogaster, GI24644339, Length=251, Percent_Identity=34.6613545816733, Blast_Score=116, Evalue=1e-26,
Organism=Drosophila melanogaster, GI21357041, Length=246, Percent_Identity=34.9593495934959, Blast_Score=115, Evalue=2e-26,
Organism=Drosophila melanogaster, GI24639444, Length=255, Percent_Identity=32.5490196078431, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24643142, Length=246, Percent_Identity=33.3333333333333, Blast_Score=109, Evalue=2e-24,
Organism=Drosophila melanogaster, GI23397609, Length=259, Percent_Identity=31.2741312741313, Blast_Score=105, Evalue=3e-23,
Organism=Drosophila melanogaster, GI21355319, Length=251, Percent_Identity=29.8804780876494, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24644337, Length=172, Percent_Identity=34.8837209302326, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21357673, Length=198, Percent_Identity=29.2929292929293, Blast_Score=80, Evalue=8e-16,
Organism=Drosophila melanogaster, GI161076933, Length=197, Percent_Identity=29.9492385786802, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24665243, Length=194, Percent_Identity=32.9896907216495, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24584748, Length=197, Percent_Identity=29.9492385786802, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI221331218, Length=194, Percent_Identity=32.9896907216495, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI28574402, Length=195, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24584744, Length=195, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221331216, Length=194, Percent_Identity=31.9587628865979, Blast_Score=72, Evalue=4e-13,
Organism=Drosophila melanogaster, GI24665247, Length=194, Percent_Identity=31.9587628865979, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI116007236, Length=199, Percent_Identity=29.1457286432161, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24641232, Length=230, Percent_Identity=26.5217391304348, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21355631, Length=175, Percent_Identity=26.8571428571429, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI116007234, Length=212, Percent_Identity=30.188679245283, Blast_Score=65, Evalue=3e-11,
Organism=Drosophila melanogaster, GI24656154, Length=209, Percent_Identity=33.0143540669856, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI19922628, Length=209, Percent_Identity=33.0143540669856, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 25146; Mature: 25015

Theoretical pI: Translated: 4.59; Mature: 4.59

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTAPLTGRRALVTGGSRGIGAEIVRRLAADGAAVAFTYSASGTNAEKLVAEVAADGGTA
CCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEE
VAIQADAADPAQTAAAVDRAVAELGGLDIVVNNAAVAHIAPFDEFPAEQFDRLVAINIGG
EEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCCHHHHCCEEEEEECC
MYWTTRTAIKHLGEGGRIINIGSINADRIPGPGLSVYGMTKGAVASFTRGLARDLGASGI
EEEHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCE
TVNNVQPGPIDTDANPDNGDFAESLKQVTTQGRYGHTTDVASFVSFLAGPESGYITGANL
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCEE
NVDGGFTV
ECCCCCCC
>Mature Secondary Structure 
STAPLTGRRALVTGGSRGIGAEIVRRLAADGAAVAFTYSASGTNAEKLVAEVAADGGTA
CCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCCEE
VAIQADAADPAQTAAAVDRAVAELGGLDIVVNNAAVAHIAPFDEFPAEQFDRLVAINIGG
EEEEECCCCHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCCHHHHCCEEEEEECC
MYWTTRTAIKHLGEGGRIINIGSINADRIPGPGLSVYGMTKGAVASFTRGLARDLGASGI
EEEHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCE
TVNNVQPGPIDTDANPDNGDFAESLKQVTTQGRYGHTTDVASFVSFLAGPESGYITGANL
EECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCEE
NVDGGFTV
ECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]